Compare commits
2
Commits
v4.0.1
...
notebooks-cron
| Author | SHA1 | Date | |
|---|---|---|---|
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761055c77a | ||
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db14a3733c |
+34
-9
@@ -255,6 +255,20 @@ jobs:
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- checkout
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- run: pip install requests
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- run: python ./utils/link_tester.py
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deploy_notebooks:
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working_directory: ~/transformers
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docker:
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- image: circleci/python:3.6
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steps:
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- add_ssh_keys:
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fingerprints:
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- "5b:7a:95:18:07:8c:aa:76:4c:60:35:88:ad:60:56:71"
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- checkout
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- run: pip install --upgrade pip
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- run: pip install nbformat
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- run: python .circleci/generate_notebooks.py
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- run: scp -r -oStrictHostKeyChecking=no ./doc_notebooks/* $doc:$dir/doc_notebooks
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# TPU JOBS
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run_examples_tpu:
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@@ -293,15 +307,26 @@ workflows:
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version: 2
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build_and_test:
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jobs:
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- check_code_quality
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- check_repository_consistency
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- run_examples_torch
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- run_tests_custom_tokenizers
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- run_tests_torch_and_tf
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- run_tests_torch
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- run_tests_tf
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- build_doc
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- deploy_doc: *workflow_filters
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# - check_code_quality
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# - check_repository_consistency
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# - run_examples_torch
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# - run_tests_custom_tokenizers
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# - run_tests_torch_and_tf
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# - run_tests_torch
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# - run_tests_tf
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# - build_doc
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# - deploy_doc: *workflow_filters
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- deploy_notebooks
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notebooks:
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triggers:
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- schedule:
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cron: "0 8 * * *"
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filters:
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branches:
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only:
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- master
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jobs:
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- deploy_notebooks
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# tpu_testing_jobs:
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# triggers:
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# - schedule:
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@@ -0,0 +1,476 @@
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import nbformat
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import os
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import re
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import shutil
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# Launch from root of repo
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PATH_TO_DOCS = 'docs/source'
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PATH_TO_DEST = 'doc_notebooks'
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DOC_BASE_URL = "https://huggingface.co/transformers/"
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# These are the doc files converted, add any new tutorial to this list if you want it handled by the conversion
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# script.
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TUTORIAL_FILES = [
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"benchmarks.rst",
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"multilingual.rst",
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"perplexity.rst",
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"preprocessing.rst",
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"quicktour.rst",
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"task_summary.rst",
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"tokenizer_summary.rst",
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"training.rst"
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]
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###################################
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# Parsing the rst file #
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###################################
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# Re pattern that catches markdown titles.
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_re_title = re.compile(r"^#+\s+(\S+)")
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# Re pattern that catches rst blocks of the form `.. block_name::`.
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_re_block = re.compile(r"^\.\.\s+(\S+)::")
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# Re pattern that catches what's after the :: in rst blocks of the form `.. block_name:: something`.
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_re_block_lang = re.compile(r"^\.\.\s+\S+::\s*(\S+)(\s+|$)")
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# Re pattern that catchers section names like `.. _name:`.
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_re_anchor_section = re.compile(r"^\.\.\s+_(\S+):")
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# Re pattern that catches indentation at the start of a line.
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_re_indent = re.compile(r"^(\s*)\S")
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def split_blocks(lines):
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""" Read the lines of a doc file and group them by blocks."""
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blocks = []
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block_type = None
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current_block = []
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i = 0
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def _move_to_next_non_empty_line(i):
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while i < len(lines) and len(lines[i]) == 0:
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i += 1
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return i
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def _build_block(blocks, current_block, block_type):
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if len(current_block) > 0:
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while len(current_block[-1]) == 0:
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current_block = current_block[:-1]
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blocks.append(('\n'.join(current_block), block_type))
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return blocks, []
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while i < len(lines):
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line = lines[i]
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if _re_title.search(line) is not None:
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blocks, current_block = _build_block(blocks, current_block, "prose")
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blocks.append((line, "title"))
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i += 1
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i = _move_to_next_non_empty_line(i)
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elif _re_block.search(line) is not None:
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blocks, current_block = _build_block(blocks, current_block, "prose")
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block_type = _re_block.search(line).groups()[0]
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if _re_block_lang.search(line):
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block_type += " " + _re_block_lang.search(line).groups()[0]
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i += 1
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i = _move_to_next_non_empty_line(i)
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indent = _re_indent.search(lines[i]).groups()[0]
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if len(indent) > 0:
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while i < len(lines) and (lines[i].startswith(indent) or len(lines[i]) == 0):
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current_block.append(lines[i])
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i += 1
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blocks, current_block = _build_block(blocks, current_block, block_type)
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elif _re_anchor_section.search(line):
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blocks, current_block = _build_block(blocks, current_block, "prose")
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blocks.append((line, "anchor"))
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i += 1
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i = _move_to_next_non_empty_line(i)
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else:
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current_block.append(line)
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i += 1
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blocks, current_block = _build_block(blocks, current_block, "prose")
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return blocks
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###################################
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# Text formatting and cleaning #
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###################################
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def process_titles(lines):
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""" Converts rst titles to markdown titles."""
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title_chars = """= - ` : ' " ~ ^ _ * + # < >""".split(" ")
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title_levels = {}
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new_lines = []
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for line in lines:
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if len(new_lines) > 0 and len(line) >= len(new_lines[-1]) and len(set(line)) == 1 and line[
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0] in title_chars and line != "::":
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char = line[0]
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level = title_levels.get(char, len(title_levels) + 1)
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if level not in title_levels:
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title_levels[char] = level
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new_lines[-1] = f"{'#' * level} {new_lines[-1]}"
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else:
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new_lines.append(line)
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return new_lines
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# Re pattern to catch things inside ` ` in :obj:`thing`.
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_re_obj = re.compile(r":obj:`([^`]+)`")
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# Re pattern to catch things inside ` ` in :math:`thing`.
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_re_math = re.compile(r":math:`([^`]+)`")
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# Re pattern to catch things between single backquotes.
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_re_single_backquotes = re.compile(r"(^|[^`])`([^`]+)`([^`]|$)")
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# Re pattern to catch things between stars.
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_re_stars = re.compile(r"\*([^\*]+)\*")
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# Re pattern to catch things between double backquotes.
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_re_double_backquotes = re.compile(r"``([^`]+)``")
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# Re pattern to catch things inside ` ` in :func/class/meth:`thing`.
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_re_func_class = re.compile(r":(?:func|class|meth):`([^`]+)`")
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def convert_rst_formatting(text):
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""" Convert rst syntax for formatting to markdown in text."""
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# Remove :class:, :func: and :meth: markers. Simplify what's inside and put double backquotes
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# (to not be caught by the italic conversion).
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def _rep_func_class(match):
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name = match.groups()[0]
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splits = name.split('.')
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i = 0
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while i < len(splits) - 1 and not splits[i][0].isupper():
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i += 1
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return f"``{'.'.join(splits[i:])}``"
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text = _re_func_class.sub(_rep_func_class, text)
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# Remove :obj: markers. What's after is in a single backquotes so we put in double backquotes
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# (to not be caught by the italic conversion).
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text = _re_obj.sub(r"``\1``", text)
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# Remove :math: markers.
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text = _re_math.sub(r"$\1$", text)
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# Convert content in stars to bold
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text = _re_stars.sub(r'**\1**', text)
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# Convert content in single backquotes to italic.
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text = _re_single_backquotes.sub(r'\1*\2*\3', text)
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# Convert content in double backquotes to single backquotes.
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text = _re_double_backquotes.sub(r'`\1`', text)
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# Remove remaining ::
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text = re.sub(r"::\n", "", text)
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return text
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# Re pattern to catch description and url in links of the form `description <url>`_.
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_re_links = re.compile(r"`([^`]+\S)\s+</*([^/][^>`]*)>`_+")
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# Re pattern to catch reference in links of the form :doc:`reference`.
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_re_simple_doc = re.compile(r":doc:`([^`<]*)`")
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# Re pattern to catch description and reference in links of the form :doc:`description <reference>`.
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_re_doc_with_description = re.compile(r":doc:`([^`<]+\S)\s+</*([^/][^>`]*)>`")
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# Re pattern to catch reference in links of the form :ref:`reference`.
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_re_simple_ref = re.compile(r":ref:`([^`<]*)`")
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# Re pattern to catch description and reference in links of the form :ref:`description <reference>`.
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_re_ref_with_description = re.compile(r":ref:`([^`<]+\S)\s+<([^>]*)>`")
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def convert_rst_links(text):
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""" Convert the rst links in text to markdown."""
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# Links of the form :doc:`page`
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text = _re_simple_doc.sub(r'[\1](' + DOC_BASE_URL + r'\1.html)', text)
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# Links of the form :doc:`text <page>`
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text = _re_doc_with_description.sub(r'[\1](' + DOC_BASE_URL + r'\2.html)', text)
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# Refs of the form :ref:`page`
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text = _re_simple_ref.sub(r'[\1](#\1)', text)
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# Refs of the form :ref:`text <page>`
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text = _re_ref_with_description.sub(r'[\1](#\2)', text)
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# Other links
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def _rep_links(match):
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text, url = match.groups()
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if not url.startswith('http'):
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url = DOC_BASE_URL + url
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return f"[{text}]({url})"
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text = _re_links.sub(_rep_links, text)
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return text
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###################################
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# Notes, math and reference #
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###################################
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def remove_indentation(text):
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""" Remove the indendation found in the first line in text."""
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lines = text.split("\n")
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indent = _re_indent.search(lines[0]).groups()[0]
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new_lines = [line[len(indent):] for line in lines]
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return "\n".join(new_lines)
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# For now we just do **NOTE_TYPE:** text, maybe there is some clever html solution to have something nicer.
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def convert_to_note(text, note_type):
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""" Convert text to a note of note_type."""
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text = remove_indentation(text)
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lines = text.split("\n")
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new_lines = [f"> **{note_type.upper()}:** {lines[0]}"]
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new_lines += [f"> {line}" for line in lines[1:]]
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return "\n".join(new_lines)
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def convert_math(text):
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""" Convert text to disaply mode LaTeX."""
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text = remove_indentation(text)
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return f"$${text}$$"
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def convert_anchor(text):
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""" Convert text to an anchor that can be used in the notebook."""
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anchor_name = _re_anchor_section.search(text).groups()[0]
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return f"<a id='{anchor_name}'></a>"
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###################################
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# Images #
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###################################
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_re_attr_rst = re.compile(r"^\s*:(\S+):\s*(\S.*)$")
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def convert_image(image_name, text, pref=None, origin_folder=None, dest_folder=None):
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""" Convert text to proper html code for image_name.
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Optionally copy image from origin_folder to dest_folder."""
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# Copy the image if necessary
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if origin_folder is not None and dest_folder is not None:
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origin_file = os.path.join(origin_folder, image_name)
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dest_file = os.path.join(dest_folder, image_name)
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if not os.path.isfile(dest_file):
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os.makedirs(os.path.dirname(dest_file), exist_ok=True)
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shutil.copy(origin_file, dest_file)
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attrs = {'src': image_name if pref is None else os.path.join(pref, image_name)}
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for line in text.split("\n"):
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if _re_attr_rst.search(line) is not None:
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key, attr = _re_attr_rst.search(line).groups()
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attrs[key] = attr
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html = " ".join([f'{key}="{value}"' for key, value in attrs.items()])
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return f"<img {html}/>"
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###################################
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# Tables #
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###################################
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# Matches lines with a pattern of a table new line in rst.
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_re_ignore_line_table = re.compile("^(\+[\-\s]+)+\+\s*$")
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# Matches lines with a pattern of a table new line in rst, with a first column empty.
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_re_ignore_line_table1 = re.compile("^\|\s+(\+[\-\s]+)+\+\s*$")
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# Matches lines with a pattern of a first table line in rst.
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_re_sep_line_table = re.compile("^(\+[=\s]+)+\+\s*$")
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def convert_table(text):
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""" Convert a table in text from rst to markdown."""
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lines = text.split("\n")
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new_lines = []
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for line in lines:
|
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if _re_ignore_line_table.search(line) is not None:
|
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continue
|
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if _re_ignore_line_table1.search(line) is not None:
|
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continue
|
||||
if _re_sep_line_table.search(line) is not None:
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line = line.replace('=', '-').replace('+', '|')
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new_lines.append(line)
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return "\n".join(new_lines)
|
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|
||||
|
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###################################
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# Code cleaning #
|
||||
###################################
|
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# Matches the pytorch code tag.
|
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_re_pytorch = re.compile(r"## PYTORCH CODE")
|
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# Matches the tensorflow code tag.
|
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_re_tensorflow = re.compile(r"## TENSORFLOW CODE")
|
||||
|
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|
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def split_frameworks(code):
|
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""" Split code between the two frameworks (if it has two versions) with PyTorch first."""
|
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if _re_pytorch.search(code) is None or _re_tensorflow.search(code) is None:
|
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return (code,)
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lines = code.split("\n")
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is_pytorch_first = _re_pytorch.search(lines[0]) is not None
|
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re_split = _re_tensorflow if is_pytorch_first else _re_pytorch
|
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i = 1
|
||||
while re_split.search(lines[i]) is None:
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i += 1
|
||||
j = i - 1
|
||||
while len(lines[j]) == 0:
|
||||
j -= 1
|
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return ("\n".join(lines[:j + 1]), "\n".join(lines[i:])) if is_pytorch_first else (
|
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"\n".join(lines[i:]), "\n".join(lines[:j + 1]))
|
||||
|
||||
|
||||
# Matches any doctest pattern.
|
||||
_re_doctest = re.compile(r"^(>>>|\.\.\.)")
|
||||
|
||||
|
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def parse_code_and_output(code):
|
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""" Parse code to remove indentation, doctest prompts and split between source and theoretical output."""
|
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lines = code.split("\n")
|
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indent = _re_indent.search(lines[0]).groups()[0]
|
||||
has_doctest = False
|
||||
input_lines = []
|
||||
output_lines = []
|
||||
for line in lines:
|
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if len(line) > 0:
|
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line = line[len(indent):]
|
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if _re_doctest.search(line):
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has_doctest = True
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line = line[4:]
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input_lines.append(line)
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elif has_doctest:
|
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if len(line) > 0:
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output_lines.append(line)
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||||
else:
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input_lines.append(line)
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||||
return "\n".join(input_lines), "\n".join(output_lines)
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||||
|
||||
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###################################
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||||
# All together! #
|
||||
###################################
|
||||
|
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def markdown_cell(md):
|
||||
""" Create a markdown cell with md inside."""
|
||||
return nbformat.notebooknode.NotebookNode({'cell_type': 'markdown', 'source': md, 'metadata': {}})
|
||||
|
||||
|
||||
def code_cell(code, output=None):
|
||||
""" Create a code cell with `code` and optionally, `output`."""
|
||||
if output is None or len(output) == 0:
|
||||
outputs = []
|
||||
else:
|
||||
outputs = [nbformat.notebooknode.NotebookNode({
|
||||
'data': {'text/plain': output},
|
||||
'execution_count': None,
|
||||
'metadata': {},
|
||||
'output_type': 'execute_result'
|
||||
})]
|
||||
return nbformat.notebooknode.NotebookNode(
|
||||
{'cell_type': 'code',
|
||||
'execution_count': None,
|
||||
'source': code,
|
||||
'metadata': {},
|
||||
'outputs': outputs})
|
||||
|
||||
|
||||
def create_notebook(cells):
|
||||
""" Create a notebook with `cells`."""
|
||||
return nbformat.notebooknode.NotebookNode(
|
||||
{'cells': cells,
|
||||
'metadata': {},
|
||||
'nbformat': 4,
|
||||
'nbformat_minor': 4,
|
||||
})
|
||||
|
||||
|
||||
def rm_first_line(text):
|
||||
""" Remove the first line in `text`."""
|
||||
return '\n'.join(text.split('\n')[1:])
|
||||
|
||||
|
||||
# For the first cell of the notebook
|
||||
INSTALL_CODE = """# Transformers installation
|
||||
! pip install transformers
|
||||
# To install from source instead of the last release, comment the command above and uncomment the following one.
|
||||
# ! pip install git+https://github.com/huggingface/transformers.git
|
||||
"""
|
||||
|
||||
|
||||
def convert_rst_file_to_notebook(
|
||||
rst_file,
|
||||
notebook_fname,
|
||||
framework=None,
|
||||
img_prefix=None,
|
||||
origin_folder=None,
|
||||
dest_folder=None
|
||||
):
|
||||
r"""
|
||||
Convert rst_file to a notebook named notebook_fname.
|
||||
|
||||
Args:
|
||||
- rst_file (:obj:`str`):
|
||||
The doc file to convert (in rst format).
|
||||
- notebook_fname (:obj:`str`):
|
||||
The output notebook file name (will be replaced if it exists).
|
||||
- framework (:obj:`str`, `optional`):
|
||||
If provided, must be :obj:`"pt"` or :obj:`"tf"`. In this case, only the PyTorch (resp. TensorFlow) version
|
||||
of the code is kept.
|
||||
- img_prefix (:obj:`str`, `optional`):
|
||||
If provided, will be inserted at the beginning of each image filename (in the `pytorch` or `tensorflow`
|
||||
folder, we need to add ../ to each image file to find them).
|
||||
- origin_folder (:obj:`str`, `optional`):
|
||||
If provided in conjunction with :obj:`dest_folder`, images encountered will be copied from this folder to
|
||||
:obj:`dest_folder`.
|
||||
- dest_folder (:obj:`str`, `optional`):
|
||||
If provided in conjunction with :obj:`origin_folder`, images encountered will be copied from
|
||||
:obj:`origin_folder` to this folder.
|
||||
"""
|
||||
with open(rst_file, 'r') as f:
|
||||
content = f.read()
|
||||
lines = content.split("\n")
|
||||
lines = process_titles(lines)
|
||||
blocks = split_blocks(lines)
|
||||
cells = [code_cell(INSTALL_CODE)]
|
||||
for block, block_type in blocks:
|
||||
if block_type == 'title' or block_type == 'prose':
|
||||
block = convert_table(convert_rst_formatting(convert_rst_links(block)))
|
||||
cells.append(markdown_cell(block))
|
||||
elif block_type == 'anchor':
|
||||
block = convert_anchor(block)
|
||||
cells.append(markdown_cell(block))
|
||||
elif block_type.startswith('code-block'):
|
||||
codes = split_frameworks(block)
|
||||
if framework == 'pt' and len(codes) > 1:
|
||||
codes = (rm_first_line(codes[0]),)
|
||||
elif framework == 'tf' and len(codes) > 1:
|
||||
codes = (rm_first_line(codes[1]),)
|
||||
for code in codes:
|
||||
source, output = parse_code_and_output(code)
|
||||
if block_type.endswith('bash'):
|
||||
lines = source.split("\n")
|
||||
new_lines = [line if line.startswith("#") else f"! {line}" for line in lines]
|
||||
source = "\n".join(new_lines)
|
||||
cells.append(code_cell(source, output=output))
|
||||
elif block_type.startswith("image"):
|
||||
image_name = block_type[len("image "):]
|
||||
block = convert_image(
|
||||
image_name,
|
||||
block,
|
||||
pref=img_prefix,
|
||||
origin_folder=origin_folder,
|
||||
dest_folder=dest_folder
|
||||
)
|
||||
cells.append(markdown_cell(block))
|
||||
elif block_type == "math":
|
||||
block = convert_math(block)
|
||||
cells.append(markdown_cell(block))
|
||||
else:
|
||||
block = convert_rst_formatting(convert_rst_links(block))
|
||||
block = convert_to_note(block, block_type)
|
||||
cells.append(markdown_cell(block))
|
||||
|
||||
notebook = create_notebook(cells)
|
||||
nbformat.write(notebook, notebook_fname, version=4)
|
||||
|
||||
|
||||
def convert_all_tutorials(path_to_docs=None, path_to_dest=None):
|
||||
""" Convert all tutorials into notebooks."""
|
||||
path_to_docs = PATH_TO_DOCS if path_to_docs is None else path_to_docs
|
||||
path_to_dest = PATH_TO_DEST if path_to_dest is None else path_to_dest
|
||||
for folder in ["pytorch", "tensorflow"]:
|
||||
os.makedirs(os.path.join(path_to_dest, folder), exist_ok=True)
|
||||
for file in TUTORIAL_FILES:
|
||||
notebook_name = os.path.splitext(file)[0] + ".ipynb"
|
||||
doc_file = os.path.join(path_to_docs, file)
|
||||
notebook_file = os.path.join(path_to_dest, notebook_name)
|
||||
convert_rst_file_to_notebook(doc_file, notebook_file, origin_folder=path_to_docs, dest_folder=path_to_dest)
|
||||
for folder, framework in zip(["pytorch", "tensorflow"], ["pt", "tf"]):
|
||||
notebook_file = os.path.join(os.path.join(path_to_dest, folder), notebook_name)
|
||||
convert_rst_file_to_notebook(doc_file, notebook_file, framework=framework, img_prefix="..")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
convert_all_tutorials()
|
||||
Reference in New Issue
Block a user