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195 Commits
Author SHA1 Message Date
LysandreJik 6f5a12a583 Release: v2.7.0 2020-03-30 08:49:24 -04:00
Patrick von Platen 296252c49e fix lm lables in docstring (#3529) 2020-03-30 14:26:24 +02:00
Patrick von Platen 75ec6c9e3a [T5] make decoder input ids optional for t5 training (#3521)
* make decoder input ids optional for t5 training

* lm_lables should not be shifted in t5

* add tests

* finish shift right functionality for PT T5

* move shift right to correct class

* cleaner code

* replace -100 values with pad token id

* add assert statement

* remove unnecessary for loop

* make style
2020-03-30 13:45:26 +02:00
Patrick von Platen 5b44e0a31b [T5] Add training documenation (#3507)
* Add clear description of how to train T5

* correct docstring in T5

* correct typo

* correct docstring format

* update t5 model docs

* implement collins feedback

* fix typo and add more explanation for sentinal tokens

* delete unnecessary todos
2020-03-30 13:35:53 +02:00
Sam Shleifer 33ef7002e1 [Docs] examples/summarization/bart: Simplify CNN/DM preprocessi… (#3516) 2020-03-29 13:25:42 -04:00
Sam Shleifer f6a23d1911 [BART] add bart-large-xsum weights (#3422) 2020-03-29 10:51:13 -04:00
Stefan Schweter 601ac5b1dc [model_cards]: use MIT license for all dbmdz models 2020-03-27 18:06:25 -04:00
Patrick von Platen 17dceae7a1 Fix circle ci flaky fail of wmt example (#3485)
* force bleu

* fix wrong file name

* rename file

* different filenames for each example test

* test files should clean up after themselves

* test files should clean up after themselves

* do not force bleu

* correct typo

* fix isort
2020-03-27 13:01:28 -04:00
Patrick von Platen 00ea100e96 add summarization and translation to notebook (#3478) 2020-03-27 11:05:37 -04:00
Funtowicz Morgan b08259a120 run_ner.py / bert-base-multilingual-cased can output empty tokens (#2991)
* Use tokenizer.num_added_tokens to count number of added special_tokens instead of hardcoded numbers.

Signed-off-by: Morgan Funtowicz <morgan@huggingface.co>

* run_ner.py - Do not add a label to the labels_ids if word_tokens is empty.

This can happen when using bert-base-multilingual-cased with an input containing an unique space.
In this case, the tokenizer will output just an empty word_tokens thus leading to an non-consistent behavior
over the labels_ids tokens adding one more tokens than tokens vector.

Signed-off-by: Morgan Funtowicz <morgan@huggingface.co>
2020-03-27 10:59:55 -04:00
Patrick von Platen f4f4946836 Rename t5-large to t5-base in README.md 2020-03-27 15:57:58 +01:00
Patrick von Platen fa9af2468a Add T5 to docs (#3461)
* add t5 docs basis

* improve docs

* add t5 docs

* improve t5 docstring

* add t5 tokenizer docstring

* finish docstring

* make style

* add pretrained models

* correct typo

* make examples work

* finalize docs
2020-03-27 10:57:16 -04:00
Lysandre Debut ff80b73157 Add option to choose T5 model size. (#3480)
T5-small in test


isort
2020-03-27 15:56:59 +01:00
LysandreJik e2c05f06ef Correct indentation in docstring
For some reason Sphinx extremely dislikes this and crashes.
2020-03-27 09:28:52 -04:00
Sam Shleifer 3ee431dd4c [Bart/Memory] Two separate, smaller decoder attention masks (#3371) 2020-03-26 21:34:15 -04:00
Manuel Romero 53fe733805 Model Cards: Fix grammar error (#3467) 2020-03-26 21:33:33 -04:00
Sam Shleifer c10decf7a0 [Bart: example] drop columns that are exclusively pad_token_id… (#3400)
* trim seq_len below 1024 if there are columns full of pad_token_id
* Centralize trim_batch so SummarizationDataset can use it too
2020-03-26 19:33:54 -04:00
Sam Shleifer 63f4d8cad0 [Bart/Memory] SelfAttention only returns weights if config.outp… (#3369) 2020-03-26 18:42:39 -04:00
Sam Shleifer 2b2a2f8df2 [Bart] Fix: put dummy_inputs on correct device (#3398)
* Dummy inputs to model.device

* Move self.device to ModuleUtilsMixin
2020-03-26 18:42:09 -04:00
Sam Shleifer 1a5aefc95c [Seq2Seq Generation] Call encoder before expanding input_ids (#3370) 2020-03-26 18:41:19 -04:00
Sam Shleifer 39371ee454 [Bart/Memory] don't create lm_head (#3323)
* delete lm_head, skips weight tying
* Fixed s3
2020-03-26 18:40:39 -04:00
Patrick von Platen 5ad2ea06af Add wmt translation example (#3428)
* add translation example

* make style

* adapt docstring

* add gpu device as input for example

* small renaming

* better README
2020-03-26 19:07:59 +01:00
Patrick von Platen b4fb94fe6d revert unpin isort commit 2020-03-26 13:19:18 -04:00
Patrick von Platen e703e923ca Add t5 summarization example (#3411)
* rebase to master

* change tf to pytorch

* change to pytorch

* small fix

* renaming

* add gpu training possibility

* renaming

* improve README

* incoorporate collins feedback

* better Readme

* better README.md
2020-03-26 18:17:55 +01:00
1a6c546c6f Add missing token classification for XLM (#3277)
* Add the missing token classification for XLM

* fix styling

* Add XLMForTokenClassification to AutoModelForTokenClassification class

* Fix docstring typo for non-existing class

* Add the missing token classification for XLM

* fix styling

* fix styling

* Add XLMForTokenClassification to AutoModelForTokenClassification class

* Fix docstring typo for non-existing class

* Add missing description for AlbertForTokenClassification

* fix styling

* Add missing docstring for AlBert

* Slow tests should be slow

Co-authored-by: Sakares Saengkaew <s.sakares@gmail.com>
Co-authored-by: LysandreJik <lysandre.debut@reseau.eseo.fr>
2020-03-26 10:22:13 -04:00
Patrick von Platen 311970546f rename string in pipeline 2020-03-26 14:59:49 +01:00
Manuel Romero 7420a6a9cc Create card for model GPT-2-finetuned-CORD19 2020-03-26 09:10:09 -04:00
Patrick von Platen 022e8fab97 Adds translation pipeline (#3419)
* fix merge conflicts

* add t5 summarization example

* change parameters for t5 summarization

* make style

* add first code snippet for translation

* only add prefixes

* add prefix patterns

* make style

* renaming

* fix conflicts

* remove unused patterns

* solve conflicts

* fix merge conflicts

* remove translation example

* remove summarization example

* make sure tensors are in numpy for float comparsion

* re-add t5 config

* fix t5 import config typo

* make style

* remove unused numpy statements

* update doctstring

* import translation pipeline
2020-03-26 13:50:58 +01:00
HUSEIN ZOLKEPLI 3c5c567507 Update model card huseinzol05/bert-base-bahasa-cased (#3425)
* add bert bahasa readme

* update readme

* update readme

* added xlnet
2020-03-26 07:50:27 -04:00
Patrick von Platen 9c683ef01e Add t5 to pipeline(task='summarization') (#3413)
* solve conflicts

* move warnings below

* incorporate changes

* add pad_to_max_length to pipelines

* add bug fix for T5 beam search

* add prefix patterns

* make style

* fix conflicts

* adapt pipelines for task specific parameters

* improve docstring

* remove unused patterns
2020-03-26 11:03:13 +01:00
Lysandre Debut ffcffebe85 Force the return of token type IDs (#3439) 2020-03-26 09:41:36 +01:00
Travis McGuire 010e0460b2 Updated/added model cards (#3435) 2020-03-25 16:40:03 -04:00
Patrick von Platen ffa17fe322 Extend config with task specific configs. (#3433)
* add new default configs

* change prefix default to None
2020-03-25 21:32:04 +01:00
Julien Chaumond 83272a3853 Experiment w/ dataclasses (including Py36) (#3423)
* [ci] Also run test_examples in py37

(will revert at the end of the experiment)

* InputExample: use immutable dataclass

* [deps] Install dataclasses for Py<3.7

* [skip ci] Revert "[ci] Also run test_examples in py37"

This reverts commit d29afd9959786b77759b0b8fa4e6b4335b952015.
2020-03-25 11:10:20 -04:00
Gabriele Sarti ccbe839ee0 Added BioBERT-NLI model card (#3421) 2020-03-24 21:15:55 -04:00
Andre Carrera 3d76df3a12 BART for summarization training with CNN/DM using pytorch-lightning 2020-03-24 21:00:24 -04:00
Julien Chaumond eaabaaf750 [run_language_modeling] Fix: initialize a new model from a config object 2020-03-24 17:56:40 -04:00
Julien Chaumond f8823bad9a Expose missing mappings (see #3415) 2020-03-24 17:46:25 -04:00
Julien Chaumond d0c36a7b72 [ci] Partial revert of 18eec3a984 due to fbc5bf10cf 2020-03-24 12:10:43 -04:00
LysandreJik fbc5bf10cf v2.6.0 release: isort un-pinned 2020-03-24 11:52:02 -04:00
Manuel Romero b88bda6af3 Add right model and tokenizer path in example 2020-03-24 11:30:12 -04:00
Stefan Schweter b31ef225cf [model_cards] 🇹🇷 Add new (uncased, 128k) BERTurk model 2020-03-24 11:29:06 -04:00
Stefan Schweter b4009cb001 [model_cards] 🇹🇷 Add new (cased, 128k) BERTurk model 2020-03-24 11:29:06 -04:00
Stefan Schweter d3283490ef [model_cards] 🇹🇷 Add new (uncased) BERTurk model 2020-03-24 11:29:06 -04:00
Mohamed El-Geish e279a312d6 Model cards for CS224n SQuAD2.0 models (#3406)
* Model cards for CS224n SQuAD2.0 models

* consistent spacing
2020-03-24 11:28:33 -04:00
Gabriele Sarti 7372e62b2c Added precisions in SciBERT-NLI model card (#3410) 2020-03-24 11:01:56 -04:00
LysandreJik 471cce24b3 Release: v2.6.0 2020-03-24 10:37:32 -04:00
Patrick von Platen e392ba6938 Add camembert integration tests (#3375)
* add integration tests for camembert

* use jplu/tf-camembert fro the moment

* make style
2020-03-24 10:18:37 +01:00
Julien Chaumond a8e3336a85 [examples] Use AutoModels in more examples 2020-03-23 20:11:14 -04:00
Julien Chaumond ec6766a363 [deps] scikit-learn's transient issue was fixed 2020-03-23 18:38:09 -04:00
Julien Chaumond f7dcf8fcea [BertAbs] Move files around for more consistent naming 2020-03-23 13:58:49 -04:00
Julien Chaumond e25c4f4027 [ALBERT] move things around for more consistent naming
see #3359

cc @lysandrejik
2020-03-23 13:58:21 -04:00
Manuel Romero 85b324bee5 Add comparison table with older brother in family 2020-03-23 12:11:20 -04:00
Manuel Romero b7aa077a63 Create card for the model 2020-03-23 12:10:41 -04:00
Manuel Romero f740177c87 Add comparison table with new models 2020-03-23 12:10:23 -04:00
LysandreJik e52482909b Correct order for dev/quality dependencies
cc @julien-c
2020-03-23 12:01:23 -04:00
Gabriele Sarti 28424906c2 Added scibert-nli model card 2020-03-23 11:55:41 -04:00
Julien Chaumond 18eec3a984 [ci] simpler way to load correct version of isort
hat/tip @bramvanroy
2020-03-23 10:03:22 -04:00
Julien Chaumond cf72479bf1 One last reorder of {scheduler,optimizer}.step() 2020-03-20 18:05:50 -04:00
Elijah Rippeth 634bf6cf7e fixes lr_scheduler warning
For more details, see https://pytorch.org/docs/stable/optim.html#how-to-adjust-learning-rate
2020-03-20 18:03:50 -04:00
Travis McGuire 265709f5cd New model, new model cards 2020-03-20 18:01:01 -04:00
Bram Vanroy 115abd2166 Handle pinned version of isort
The CONTRIBUTING file pins to a specific version of isort, so we might as well install that in `dev` . This makes it easier for contributors so they don't have to manually install the specific commit.
2020-03-20 18:00:04 -04:00
Patrick von Platen 95e00d0808 Clean special token init in modeling_....py (#3264)
* make style

* fix conflicts
2020-03-20 21:41:04 +01:00
Nitish Shirish Keskar 8becb73293 removing torch.cuda.empty_cache() from TF function (#3267)
torch.cuda.empty_cache() was being called from a TF function (even when torch is unavailable)
not sure any replacement is needed if TF OOMs
2020-03-19 23:25:30 +01:00
Julien Chaumond ecfd336318 Simpler Error message when loading config/model with .from_pretrained() (#3341) 2020-03-19 23:23:03 +01:00
Kyeongpil Kang 8eeefcb576 Update 01-training-tokenizers.ipynb (typo issue) (#3343)
I found there are two grammar errors or typo issues in the explanation of the encoding properties.

The original sentences:
If your was made of multiple \"parts\" such as (question, context), then this would be a vector with for each token the segment it belongs to
If your has been truncated into multiple subparts because of a length limit (for BERT for example the sequence length is limited to 512), this will contain all the remaining overflowing parts.

I think "input" should be inserted after the phrase "If your".
2020-03-19 23:21:49 +01:00
Patrick von PlatenandMorgan Funtowicz bbf26c4e61 Support T5 Generation (#3228)
* fix conflicts

* update bart max length test

* correct spelling mistakes

* implemented model specific encode function

* fix merge conflicts

* better naming

* save intermediate state -> need to rethink strucuture a bit

* leave tf problem as it is for now

* current version

* add layers.pop

* remove ipdb

* make style

* clean return cut decoding

* remove ipdbs

* Fix restoring layers in the decoders that doesnt exists.

* push good intermediate solution for now

* fix conflicts

* always good to refuse to merge conflicts when rebasing

* fix small bug

* improve function calls

* remove unused file

* add correct scope behavior for t5_generate

Co-authored-by: Morgan Funtowicz <funtowiczmo@gmail.com>
2020-03-19 23:18:23 +01:00
Julien Chaumond 656e1386a2 Fix #3305: run_ner only possible on ModelForTokenClassification models 2020-03-19 16:41:28 -04:00
husein zolkepli 0c44b11917 add bert bahasa readme 2020-03-19 15:08:19 -04:00
Manuel Romero e99af3b17b Create model card for bert-small-finetuned-squadv2 2020-03-19 15:07:55 -04:00
Manuel Romero 39db055268 Merge pull request #3348 from mrm8488/patch-28
Create card for BERT-Mini finetuned on SQuAD v2
2020-03-19 15:07:39 -04:00
Manuel Romero dedc7a8fdb Create card for BERT-Tiny fine-tuned on SQuAD v2
- Only 17MB of Model weights!!
2020-03-19 15:07:22 -04:00
Manuel Romero 676adf8625 Created card for spanbert-finetuned-squadv1 2020-03-19 15:06:35 -04:00
Antti Virtanen 11d8bcc9d7 Add model cards for FinBERT. (#3331)
* Add a model card for FinBERT

This is a copy of https://github.com/TurkuNLP/FinBERT/blob/master/README.md.

* Added a file for uncased.

* Add metadata for cased.

* Added metadata for uncased.
2020-03-19 15:06:01 -04:00
Lysandre Debut f049be7ad4 Export ALBERT main layer in TensorFlow (#3354) 2020-03-19 13:53:05 -04:00
Kyeongpil Kang 3bedfd3347 Fix wrong link for the notebook file (#3344)
For the tutorial of "How to generate text", the URL link was wrong (it was linked to the tutorial of "How to train a language model").

I fixed the URL.
2020-03-19 17:22:47 +01:00
Serkan KarakulakandLysandreJik b2c2c31c60 Minor Bug Fix for Running Roberta on Glue (#3240)
* added return_token_type_ids argument for tokenizers which do not generate return_type_ids by default

* fixed styling

* Style

Co-authored-by: LysandreJik <lysandre.debut@reseau.eseo.fr>
2020-03-19 12:08:31 -04:00
Sam Shleifer 4e4403c9b4 [BART] torch 1.0 compatibility (#3322)
* config.activation_function
2020-03-19 11:56:54 -04:00
mataney c44a17db1b [FIX] not training when epoch is small (#3006)
* solving bug where for small epochs and large gradient_accumulation_steps we never train

* black formatting

* no need to change these files
2020-03-19 11:21:21 -04:00
Sam Shleifer ad7233fc01 [BART] cleanup: remove redundant kwargs, improve docstrings (#3319) 2020-03-19 11:16:51 -04:00
Mohamed El-Geish cd21d8bc00 Typo in warning message (#3219)
`T5Tokenizer` instead of `XLNetTokenizer`
2020-03-19 09:49:25 -04:00
Matthew Goldey 8d3e218ea6 fix typo in docstring demonstrating usage (#3213) 2020-03-19 09:47:54 -04:00
Patrick von Platen cec3cdda15 Fix input ids can be none attn mask (#3345)
* fix issue 3289

* fix attention mask if input_ids None behavior
2020-03-19 09:55:17 +01:00
Junyi_Li f6d813aaaa Create README.md 2020-03-18 23:45:02 -04:00
Junyi_Li 939328111b Create README.md
roberta_chinese_base card
2020-03-18 23:44:12 -04:00
Junyi_Li 29442d2edf Create README.md
albert_chinese_tiny card
2020-03-18 23:43:49 -04:00
Kyle Lo 20139b7c8d Added model cards for SciBERT models uploaded under AllenAI org (#3330)
* Create README.md

* model card

* add model card for cased
2020-03-18 15:45:11 -04:00
Morgan Funtowicz cae334c43c Improve fill-mask pipeline example in 03-pipelines notebook.
Remove hardcoded mask_token and use the value provided by the tokenizer.
2020-03-18 17:11:42 +01:00
Branden Chan 4b1970bb4c Create README.md 2020-03-18 11:37:17 -04:00
Lysandre Debut d6afbd323d XLM-R Tokenizer now passes common tests + Integration tests (#3198)
* XLM-R now passes common tests + Integration tests

* Correct mask index

* Model input names

* Style

* Remove text preprocessing

* Unneccessary import
2020-03-18 09:52:49 -04:00
Patrick von Platen 292186a3e7 Adding LM Head to Transfo-XL and first step to fixing problem with Adaptive Embeddings in TransfoXL (#3286)
* first commit

* work in progress

* make language generation task pass

* update to working version for LM

* delete print

* remove dead code

* make style
2020-03-18 09:24:27 -04:00
Patrick von Platen efdb46b6e2 add link to blog post (#3326) 2020-03-18 13:24:28 +01:00
Patrick von Platen ddb10c6447 improve doctstring (#3327) 2020-03-18 13:24:09 +01:00
Junyi_Li d7f98cd3ef Init card for model 2020-03-18 07:55:27 -04:00
Sam Shleifer 38a555a83c Add Summarization to Pipelines (#3128)
* passing

* Undo stupid chg

* docs

* undo rename

* delete-cruft

* only import if you have torch

* Dont rely on dict ordering

* Fix dict ordering upstream

* docstring link

* docstring link

* remove trailing comma for 3.5 compat

* new name

* delegate kwarging

* Update kwargs
2020-03-17 18:04:21 -04:00
J.P Lee 2b60a26b46 Update examples/ner/run_ner.py to use AutoModel (#3305)
* Update examples/ner/run_ner.py to use AutoModel

* Fix missing code and apply `make style` command
2020-03-17 12:30:10 -04:00
Manuel Romero e41212c715 Create model card for CodeBERTaPy (#3309) 2020-03-17 12:29:11 -04:00
Julien Chaumond 0f1bc0d68e [model_cards] Add google thumbnail 2020-03-17 12:02:51 -04:00
Nathan Raw 930c9412b4 [WIP] Lightning glue example (#3290)
* ✨ Alter base pl transformer to use automodels

* 🐛 Add batch size env variable to function call

* 💄 Apply black code style from Makefile

* 🚚 Move lightning base out of ner directory

* ✨ Add lightning glue example

* 💄 self

* move _feature_file to base class

* ✨ Move eval logging to custom callback

* 💄 Apply black code style

* 🐛 Add parent to pythonpath, remove copy command

* 🐛 Add missing max_length kwarg
2020-03-17 11:46:42 -04:00
Patrick von Platen e8f44af5bf [generate] do_sample default back to False (#3298)
* change do_samples back

* None better default as boolean

* adapt do_sample to True in test example

* make style
2020-03-17 10:52:37 -04:00
Thomas Wolf 2187c49f5c CPU/GPU memory benchmarking utilities - Remove support for python 3.5 (now only 3.6+) (#3186)
* memory benchmark rss

* have both forward pass and line-by-line mem tracing

* cleaned up tracing

* refactored and cleaning up API

* no f-strings yet...

* add GPU mem logging

* fix GPU memory monitoring

* style and quality

* clean up and doc

* update with comments

* Switching to python 3.6+

* fix quality
2020-03-17 10:17:11 -04:00
Jannes bd3feddf67 Create README.md (#3306)
* Create README.md

* Updated README.md
2020-03-17 09:05:11 -04:00
Julien Chaumond 68ef0a111f [model_cards] Symlink all Google AI's BERT Miniatures to source model card 2020-03-16 23:37:42 -04:00
Sam Shleifer b2c1a447fe [BART] Delete redundant unit test (#3302) 2020-03-16 23:09:10 -04:00
iuliaturc-google b2028cc26b Add model card for Google AI's BERT Miniatures (#3301)
This model card is intended to be shared among all models under google/bert_uncased_*
(We'll need some support from HuggingFace to get this card cross-linked from all models)
2020-03-16 21:51:46 -04:00
Patrick von Platen 4759176313 add camembert for Question answering for examples 2020-03-16 14:42:11 -04:00
Sam Shleifer 11573231c6 [BART] generation_mode as a kwarg not a class attribute (#3278) 2020-03-16 12:47:53 -04:00
Manuel Romero de697935a2 Create model card for spanbert-finetuned-squadv2 2020-03-16 12:32:46 -04:00
Manuel Romero 3ddd2029bc Create CodeBERTaJS model card 2020-03-16 12:23:01 -04:00
Julien PluandLysandre Debut 879e1d3234 Add TF2 version of FlauBERT (#2700)
* Add TF2 version of FlauBERT

* Add TF2 version of FlauBERT

* Add documentation

* Apply style and quality

* Apply style once again

Co-authored-by: Lysandre Debut <lysandre@huggingface.co>
2020-03-16 09:29:21 -04:00
Patrick von Platen af471ce5e8 Improved Error message when loading config/model with .from_pretrained() (#3247)
* better error message

* better error message

* update to model identifier instead of url

* update to model identifier instead of ur
2020-03-16 09:48:30 +01:00
Sam Shleifer 5ea8ba67b4 [BART] Remove unused kwargs (#3279)
* Remove unused kwargs
* dont call forward in tests
2020-03-15 23:00:44 -04:00
Thomas Wolf 3814e167d9 Merge pull request #3225 from patrickvonplaten/finalize_merge_bart_generate_into_default_generate
Complete merge Seq-2-Seq generation into default generation
2020-03-14 15:08:59 +01:00
Sam Shleifer 2bd79e23de [BART] FP16 testing fixes (#3266) 2020-03-13 19:48:26 -04:00
Julien Chaumond 8320feec09 [model_cards] CodeBERTa 2020-03-13 18:28:09 -04:00
Patrick von Platen ab756f713c add gpt2-xl for tf 2020-03-13 16:40:35 -04:00
Patrick von Platen 4f75d380a4 make style 2020-03-13 16:35:52 +01:00
Patrick von Platen c2ee3840ae update file to new starting token logic 2020-03-13 16:34:44 +01:00
Benjamin Muller cc4c37952a Create camembert-base-README.md 2020-03-13 09:35:53 -04:00
dependabot[bot] afea70c01c Bump psutil from 5.6.3 to 5.6.6 in /examples/distillation
Bumps [psutil](https://github.com/giampaolo/psutil) from 5.6.3 to 5.6.6.
- [Release notes](https://github.com/giampaolo/psutil/releases)
- [Changelog](https://github.com/giampaolo/psutil/blob/master/HISTORY.rst)
- [Commits](https://github.com/giampaolo/psutil/compare/release-5.6.3...release-5.6.6)

Signed-off-by: dependabot[bot] <support@github.com>
2020-03-12 21:14:56 -04:00
Sam Shleifer 087465b943 add BART to README (#3255) 2020-03-12 19:38:05 -04:00
Patrick von Platen 6a82f774f2 fix typo 2020-03-12 21:10:51 +01:00
Patrick von Platen f1c71da115 fix eos_token_ids in test 2020-03-12 21:00:54 +01:00
Patrick von Platen 6047f46b19 re-add eos token to get good bart results 2020-03-12 20:17:50 +01:00
Patrick von Platen c11160114a small clean-up 2020-03-12 20:02:35 +01:00
Sam Shleifer 2e81b9d8d7 Bart: update example for #3140 compatibility (#3233)
* Update bart example docs
2020-03-12 10:36:37 -04:00
Julien ChaumondandDarek Kłeczek 72768b6b9c [model_cards] polbert: simplify usage example with pipelines
Co-Authored-By: Darek Kłeczek <darek.kleczek@gmail.com>
2020-03-12 10:05:40 -04:00
Julien Chaumond a4c75f1492 [ci] last resort 2020-03-11 19:11:19 -04:00
Julien Chaumond 824e320d96 [ci] Fixup c6cf925 2020-03-11 18:52:10 -04:00
Julien Chaumond c6cf925ff8 [ci] last resort
while looking for fix to https://twitter.com/julien_c/status/1237864185821708291
2020-03-11 18:49:19 -04:00
Stefan Schweter 14e455b716 [model_cards] 🇹🇷 Add new (cased) DistilBERTurk model 2020-03-11 18:40:38 -04:00
Emily Alsentzer f65f74bbce Create README.md (#3230) 2020-03-11 12:37:00 -04:00
Emily Alsentzer 324292cfc7 Add Bio+ Clinical BERT model card (#3229)
* Create README.md

* Update README.md
2020-03-11 12:36:33 -04:00
Julien ChaumondandPatrick von Platen e43afb1bb8 [model_cards] DialoGPT: How to use + thumbnail + conversational tag
cc @dreasysnail

Co-Authored-By: Patrick von Platen <patrick.v.platen@gmail.com>
2020-03-11 11:36:47 -04:00
Julien Chaumond 5085df995f [model_cards] PolBERT tweaks 2020-03-11 09:29:22 -04:00
Darek Kłeczek 19a63d8245 Create Readme.md model card (#3221) 2020-03-11 09:12:48 -04:00
Yizhe dc848c2994 Create README.md 2020-03-11 09:10:57 -04:00
Yizhe 6ad221daf3 Create README.md 2020-03-11 09:10:23 -04:00
Yizhe 735180aa14 Create README.md 2020-03-11 09:10:13 -04:00
Manuel Romero 6c61c0801e Create README.md 2020-03-11 09:03:30 -04:00
Manuel Romero 235616686a Update README.md
- Update title
- Remove metrics
2020-03-11 09:03:20 -04:00
Manuel Romero 5bb00c817f Update README.md
Change title to clarify the model description
2020-03-11 09:03:07 -04:00
Manuel Romero 601e424750 Update README.md 2020-03-11 09:02:56 -04:00
Manuel Romero 1b9e765b21 Update README.md
- Remove metrics until tested on other xquad benchmarks
2020-03-11 09:02:18 -04:00
Thomas Wolf db29ffc978 Merge pull request #3140 from patrickvonplaten/merge_bart_generate_into_default_generate
Merge bart generate into default generate
2020-03-11 13:21:53 +01:00
Patrick von Platen ac303eae46 fix problem with half 2020-03-11 12:24:30 +01:00
Patrick von Platen bc9d5d917c make all tensors half precision 2020-03-11 12:15:38 +01:00
Patrick von Platen a332cc9f7f finalize generation merge 2020-03-11 11:53:36 +01:00
Patrick von Platen 1ba21f96ca fix bug in tf no_repeat_ngram_size 2020-03-11 11:06:56 +01:00
Patrick von Platen d997ac7810 fix typo 2020-03-11 11:06:56 +01:00
Patrick von Platen 7351a8dbaf re-add scoring filtering 2020-03-11 11:06:56 +01:00
Patrick von Platen 9b8ee8cea0 delete print and make style 2020-03-11 11:06:56 +01:00
Patrick von Platen ca1330f0b2 do not mess with the negative sign 2020-03-11 11:06:56 +01:00
Patrick von Platen 10989715d0 rename variable 2020-03-11 11:06:56 +01:00
Patrick von Platen cf06290565 remove ipdb 2020-03-11 11:06:56 +01:00
Patrick von Platen 374deef48d fixed typo 2020-03-11 11:06:56 +01:00
Patrick von Platen a2c8e516c2 fix torch to tf translation 2020-03-11 11:06:56 +01:00
Patrick von Platen ca2047bc35 refactor variable naming and improve tf generate in line with torch generate 2020-03-11 11:06:56 +01:00
patrickvonplaten 41b437ea3a add draft version of propsoed changes for ROGUE score 2020-03-11 11:06:56 +01:00
patrickvonplaten a5751f7578 fix bug with attention_mask as optional input argument 2020-03-11 11:06:56 +01:00
patrickvonplaten 629aac92ec do not allow do_sample and weird force bos token things 2020-03-11 11:06:56 +01:00
patrickvonplaten d880a5fbde finalized PR 2020-03-11 11:06:56 +01:00
patrickvonplaten 2acfe63964 best current version and make style 2020-03-11 11:06:56 +01:00
patrickvonplaten c62444da39 fix conflicts 2020-03-11 11:06:56 +01:00
Patrick von Platen 77e6775065 add current changes 2020-03-11 11:06:56 +01:00
Patrick von Platen 333affcb81 add current changes 2020-03-11 11:06:56 +01:00
Patrick von Platen 421216997b comment out stuff 2020-03-11 11:06:56 +01:00
Patrick von Platen 7a11e925cf work in progress 2020-03-11 11:06:56 +01:00
Patrick von Platen 5b3000d933 renamed min_len to min_length 2020-03-11 11:06:56 +01:00
Patrick von Platen aceb3fbaf4 only do output_past=True for language generation in bart 2020-03-11 11:06:56 +01:00
Patrick von Platen 7cba11fb9b better naming 2020-03-11 11:06:56 +01:00
Patrick von Platen ff648221bd fix conflicts 2020-03-11 11:06:56 +01:00
Patrick von Platen c0d9dd3ba9 refactored code a bit and made more generic 2020-03-11 11:06:56 +01:00
Patrick von Platen d8e2b3c547 fix conflicts 2020-03-11 11:06:56 +01:00
Julien ChaumondandThomas Wolf d6de6423ba [doc] --organization tweak
Co-Authored-By: Thomas Wolf <thomwolf@users.noreply.github.com>
2020-03-10 16:52:44 -04:00
Julien Chaumond 0e56dc3078 [doc] Document the new --organization flag of CLI 2020-03-10 16:42:01 -04:00
Julien Chaumond 270dfa1c8e [dialogpt] conversion script
Reference: https://github.com/huggingface/transformers/pull/1778#issuecomment-567675530

cc @patrickvonplaten and @dreasysnail
2020-03-10 15:09:29 -04:00
Manuel Romero 2661d80687 Update README.md
- Clarify that the model is not trained on the evaluation dataset
2020-03-10 10:59:34 -04:00
Manuel Romero 6a13448ad2 Update README.md
- Fix path of tokenizer
- Clarify that the model is not trained on the evaluation set
2020-03-10 10:59:16 -04:00
Manuel Romero e57533cca5 Create README.md 2020-03-10 10:58:13 -04:00
Patrick von Platen 31f2437f07 Merge pull request #3191 from patrickvonplaten/add_integration_tests_lm_generate_torch_tf
Add integration tests lm generate torch tf
2020-03-10 11:29:17 +01:00
Shubham Agarwal 5ca356a464 NER - pl example (#3180)
* 1. seqeval required by ner pl example. install from examples/requirements. 2. unrecognized arguments: save_steps

* pl checkpoint callback filenotfound error: make directory and pass

* #3159 pl checkpoint path difference

* 1. Updated Readme for pl 2. pl script now also correct displays logs 3. pass gpu ids compared to number of gpus

* Updated results in readme

* 1. updated readme 2. removing deprecated pl methods 3. finalizing scripts

* comment length check

* using deprecated validation_end for stable results

* style related changes
2020-03-09 20:43:38 -04:00
Travis McGuire f51ba059b9 Model card for albert-base-v2-squad2 2020-03-09 19:37:15 -04:00
Julien Chaumond cbf8f5d32b [model upload] Support for organizations 2020-03-09 17:33:57 -04:00
Lysandre 525b6b1c54 TFQA pipeline marked as slow test 2020-03-09 16:52:30 -04:00
Patrick von Platen 9050ffe035 delete w! -> need to be more careful with vim 2020-03-09 15:43:12 +01:00
Patrick von Platen efb619235c add print statement to avoid code quality problem 2020-03-09 15:31:21 +01:00
Patrick von Platen b12541c4dc test ctrl 2020-03-09 13:58:01 +00:00
Patrick von Platen b73dd1a0e4 fix typo in test xlm tf 2020-03-09 11:34:31 +01:00
Patrick von Platen 4620caa864 fix if use lang embeddings in tf xlm 2020-03-09 11:18:54 +01:00
patrickvonplaten fbd02d4693 fixed all tests, still need to check ctrl tf and pt and xlm tf 2020-03-08 21:45:55 +01:00
patrickvonplaten b4a3a64744 fix xlnet & transfotests 2020-03-08 16:25:03 +01:00
patrickvonplaten 66c827656f fix typo in test gpt2 2020-03-08 15:35:08 +01:00
patrickvonplaten 314bdc7c14 fix typo in test 2020-03-08 15:34:20 +01:00
patrickvonplaten 575976144a updated all tests 2020-03-08 15:29:10 +01:00
209 changed files with 12392 additions and 2564 deletions
+5 -5
View File
@@ -3,7 +3,7 @@ jobs:
run_tests_torch_and_tf:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
environment:
OMP_NUM_THREADS: 1
resource_class: xlarge
@@ -46,7 +46,7 @@ jobs:
run_tests_custom_tokenizers:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
environment:
RUN_CUSTOM_TOKENIZERS: yes
steps:
@@ -56,7 +56,7 @@ jobs:
run_examples_torch:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
environment:
OMP_NUM_THREADS: 1
resource_class: xlarge
@@ -69,7 +69,7 @@ jobs:
deploy_doc:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
steps:
- add_ssh_keys:
fingerprints:
@@ -94,7 +94,7 @@ jobs:
check_repository_consistency:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
resource_class: small
parallelism: 1
steps:
+6 -5
View File
@@ -1,10 +1,11 @@
name: Self-hosted runner (push)
on:
push:
branches:
- master
pull_request:
# push:
# branches:
# - master
# pull_request:
repository_dispatch:
jobs:
@@ -31,12 +32,12 @@ jobs:
run: |
source .env/bin/activate
pip install .[sklearn,tf,torch,testing]
pip uninstall -y tensorflow
- name: Are GPUs recognized by our DL frameworks
run: |
source .env/bin/activate
python -c "import torch; print(torch.cuda.is_available())"
python -c "import tensorflow as tf; print(tf.test.is_built_with_cuda(), tf.config.list_physical_devices('GPU'))"
- name: Run all non-slow tests on GPU
env:
+1 -1
View File
@@ -48,4 +48,4 @@ jobs:
run: |
source .env/bin/activate
python -m pytest -n 1 --dist=loadfile -s -v ./tests/
+18 -10
View File
@@ -66,7 +66,7 @@ Choose the right framework for every part of a model's lifetime
## Installation
This repo is tested on Python 3.5+, PyTorch 1.0.0+ and TensorFlow 2.0.0-rc1
This repo is tested on Python 3.6+, PyTorch 1.0.0+ and TensorFlow 2.0.0-rc1
You should install 🤗 Transformers in a [virtual environment](https://docs.python.org/3/library/venv.html). If you're unfamiliar with Python virtual environments, check out the [user guide](https://packaging.python.org/guides/installing-using-pip-and-virtual-environments/).
@@ -163,8 +163,9 @@ At some point in the future, you'll be able to seamlessly move from pre-training
13. **[XLM-RoBERTa](https://github.com/pytorch/fairseq/tree/master/examples/xlmr)** (from Facebook AI), released together with the paper [Unsupervised Cross-lingual Representation Learning at Scale](https://arxiv.org/abs/1911.02116) by Alexis Conneau*, Kartikay Khandelwal*, Naman Goyal, Vishrav Chaudhary, Guillaume Wenzek, Francisco Guzmán, Edouard Grave, Myle Ott, Luke Zettlemoyer and Veselin Stoyanov.
14. **[MMBT](https://github.com/facebookresearch/mmbt/)** (from Facebook), released together with the paper a [Supervised Multimodal Bitransformers for Classifying Images and Text](https://arxiv.org/pdf/1909.02950.pdf) by Douwe Kiela, Suvrat Bhooshan, Hamed Firooz, Davide Testuggine.
15. **[FlauBERT](https://github.com/getalp/Flaubert)** (from CNRS) released with the paper [FlauBERT: Unsupervised Language Model Pre-training for French](https://arxiv.org/abs/1912.05372) by Hang Le, Loïc Vial, Jibril Frej, Vincent Segonne, Maximin Coavoux, Benjamin Lecouteux, Alexandre Allauzen, Benoît Crabbé, Laurent Besacier, Didier Schwab.
16. **[Other community models](https://huggingface.co/models)**, contributed by the [community](https://huggingface.co/users).
17. Want to contribute a new model? We have added a **detailed guide and templates** to guide you in the process of adding a new model. You can find them in the [`templates`](./templates) folder of the repository. Be sure to check the [contributing guidelines](./CONTRIBUTING.md) and contact the maintainers or open an issue to collect feedbacks before starting your PR.
16. **[BART](https://github.com/pytorch/fairseq/tree/master/examples/bart)** (from Facebook) released with the paper [BART: Denoising Sequence-to-Sequence Pre-training for Natural Language Generation, Translation, and Comprehension](https://arxiv.org/pdf/1910.13461.pdf) by Mike Lewis, Yinhan Liu, Naman Goyal, Marjan Ghazvininejad, Abdelrahman Mohamed, Omer Levy, Ves Stoyanov and Luke Zettlemoyer.
17. **[Other community models](https://huggingface.co/models)**, contributed by the [community](https://huggingface.co/users).
18. Want to contribute a new model? We have added a **detailed guide and templates** to guide you in the process of adding a new model. You can find them in the [`templates`](./templates) folder of the repository. Be sure to check the [contributing guidelines](./CONTRIBUTING.md) and contact the maintainers or open an issue to collect feedbacks before starting your PR.
These implementations have been tested on several datasets (see the example scripts) and should match the performances of the original implementations (e.g. ~93 F1 on SQuAD for BERT Whole-Word-Masking, ~88 F1 on RocStories for OpenAI GPT, ~18.3 perplexity on WikiText 103 for Transformer-XL, ~0.916 Peason R coefficient on STS-B for XLNet). You can find more details on the performances in the Examples section of the [documentation](https://huggingface.co/transformers/examples.html).
@@ -471,7 +472,7 @@ python ./examples/run_generation.py \
Starting with `v2.2.2`, you can now upload and share your fine-tuned models with the community, using the <abbr title="Command-line interface">CLI</abbr> that's built-in to the library.
**First, create an account on [https://huggingface.co/join](https://huggingface.co/join)**. Then:
**First, create an account on [https://huggingface.co/join](https://huggingface.co/join)**. Optionally, join an existing organization or create a new one. Then:
```shell
transformers-cli login
@@ -490,19 +491,26 @@ transformers-cli upload ./config.json [--filename folder/foobar.json]
# (you can optionally override its filename, which can be nested inside a folder)
```
Your model will then be accessible through its identifier, a concatenation of your username and the folder name above:
```python
"username/pretrained_model"
If you want your model to be namespaced by your organization name rather than your username, add the following flag to any command:
```shell
--organization organization_name
```
**Please add a README.md model card** to the repo under `model_cards/` with: model description, training params (dataset, preprocessing, hyperparameters), evaluation results, intended uses & limitations, etc.
Your model will then be accessible through its identifier, a concatenation of your username (or organization name) and the folder name above:
```python
"username/pretrained_model"
# or if an org:
"organization_name/pretrained_model"
```
**Please add a README.md model card** to the repo under `model_cards/` with: model description, training params (dataset, preprocessing, hardware used, hyperparameters), evaluation results, intended uses & limitations, etc.
Your model now has a page on huggingface.co/models 🔥
Anyone can load it from code:
```python
tokenizer = AutoTokenizer.from_pretrained("username/pretrained_model")
model = AutoModel.from_pretrained("username/pretrained_model")
tokenizer = AutoTokenizer.from_pretrained("namespace/pretrained_model")
model = AutoModel.from_pretrained("namespace/pretrained_model")
```
List all your files on S3:
+1 -1
View File
@@ -26,7 +26,7 @@ author = u'huggingface'
# The short X.Y version
version = u''
# The full version, including alpha/beta/rc tags
release = u'2.5.1'
release = u'2.7.0'
# -- General configuration ---------------------------------------------------
+1
View File
@@ -103,3 +103,4 @@ The library currently contains PyTorch and Tensorflow implementations, pre-train
model_doc/xlmroberta
model_doc/flaubert
model_doc/bart
model_doc/t5
+1 -1
View File
@@ -1,6 +1,6 @@
# Installation
Transformers is tested on Python 3.5+ and PyTorch 1.1.0
Transformers is tested on Python 3.6+ and PyTorch 1.1.0
## With pip
+5
View File
@@ -61,3 +61,8 @@ QuestionAnsweringPipeline
.. autoclass:: transformers.QuestionAnsweringPipeline
SummarizationPipeline
==========================================
.. autoclass:: transformers.SummarizationPipeline
+101
View File
@@ -0,0 +1,101 @@
T5
----------------------------------------------------
**DISCLAIMER:** This model is still a work in progress, if you see something strange,
file a `Github Issue <https://github.com/huggingface/transformers/issues/new?assignees=&labels=&template=bug-report.md&title>`_
Overview
~~~~~
The T5 model was presented in `Exploring the Limits of Transfer Learning with a Unified Text-to-Text Transformer <https://arxiv.org/pdf/1910.10683.pdf>`_ by Colin Raffel, Noam Shazeer, Adam Roberts, Katherine Lee, Sharan Narang, Michael Matena, Yanqi Zhou, Wei Li, Peter J. Liu in
Here the abstract:
*Transfer learning, where a model is first pre-trained on a data-rich task before being fine-tuned on a downstream task, has emerged as a powerful technique in natural language processing (NLP). The effectiveness of transfer learning has given rise to a diversity of approaches, methodology, and practice.
In this paper, we explore the landscape of transfer learning techniques for NLP by introducing a unified framework that converts every language problem into a text-to-text format.
Our systematic study compares pre-training objectives, architectures, unlabeled datasets, transfer approaches, and other factors on dozens of language understanding tasks.
By combining the insights from our exploration with scale and our new "Colossal Clean Crawled Corpus", we achieve state-of-the-art results on many benchmarks covering summarization, question answering, text classification, and more.
To facilitate future work on transfer learning for NLP, we release our dataset, pre-trained models, and code.*
The Authors' code can be found `here <https://github.com/google-research/text-to-text-transfer-transformer>`_ .
Training
~~~~~~~~~~~~~~~~~~~~
T5 is an encoder-decoder model and converts all NLP problems into a text-to-text format. It is trained using teacher forcing.
This means that for training we always need an input sequence and a target sequence.
The input sequence is fed to the model using ``input_ids``. The target sequence is shifted to the right, *i.e.* perprended by a start-sequence token and fed to the decoder using the `decoder_input_ids`. In teacher-forcing style, the target sequence is then appended by the EOS token and corresponds to the ``lm_labels``. The PAD token is hereby used as the start-sequence token.
T5 can be trained / fine-tuned both in a supervised and unsupervised fashion.
- Unsupervised denoising training
In this setup spans of the input sequence are masked by so-called sentinel tokens (*a.k.a* unique mask tokens)
and the output sequence is formed as a concatenation of the same sentinel tokens and the *real* masked tokens.
Each sentinel tokens represents a unique mask token for this sentence and should start with ``<extra_id_1>``, ``<extrac_id_2>``, ... up to ``<extra_id_100>``. As a default 100 sentinel tokens are available in ``T5Tokenizer``.
*E.g.* the sentence "The cute dog walks in the park" with the masks put on "cute dog" and "the" should be processed as follows:
::
input_ids = tokenizer.encode('The <extra_id_1> walks in <extra_id_2> park', return_tensors='pt')
lm_labels = tokenizer.encode('<extra_id_1> cute dog <extra_id_2> the <extra_id_3> </s>', return_tensors='pt')
# the forward function automatically creates the correct decoder_input_ids
model(input_ids=input_ids, lm_labels=lm_labels)
- Supervised training
In this setup the input sequence and output sequence are standard sequence to sequence input output mapping.
In translation, *e.g.* the input sequence "The house is wonderful." and output sequence "Das Haus ist wunderbar." should
be processed as follows:
::
input_ids = tokenizer.encode('translate English to German: The house is wonderful. </s>', return_tensors='pt')
lm_labels = tokenizer.encode('Das Haus ist wunderbar. </s>', return_tensors='pt')
# the forward function automatically creates the correct decoder_input_ids
model(input_ids=input_ids, lm_labels=lm_labels)
Tips
~~~~~~~~~~~~~~~~~~~~
- T5 is an encoder-decoder model pre-trained on a multi-task mixture of unsupervised
and supervised tasks and for which each task is converted into a text-to-text format.
T5 works well on a variety of tasks out-of-the-box by prepending a different prefix to the input corresponding to each task, e.g.: for translation: *translate English to German: ..., summarize: ...*.
For more information about which prefix to use, it is easiest to look into Appendix D of the `paper <https://arxiv.org/pdf/1910.10683.pdf>`_ .
- For sequence to sequence generation, it is recommended to use ``T5ForConditionalGeneration.generate()``. The method takes care of feeding the encoded input via cross-attention layers to the decoder and auto-regressively generates the decoder output.
- T5 uses relative scalar embeddings. Encoder input padding can be done on the left and on the right.
T5Config
~~~~~~~~~~~~~~~~~~~~~
.. autoclass:: transformers.T5Config
:members:
T5Tokenizer
~~~~~~~~~~~~~~~~~~~~~
.. autoclass:: transformers.T5Tokenizer
:members: build_inputs_with_special_tokens, get_special_tokens_mask,
create_token_type_ids_from_sequences, save_vocabulary
T5Model
~~~~~~~~~~~~~~~~~~~~
.. autoclass:: transformers.T5Model
:members:
T5ForConditionalGeneration
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autoclass:: transformers.T5ForConditionalGeneration
:members:
TFT5Model
~~~~~~~~~~~~~~~~~~~~
.. autoclass:: transformers.TFT5Model
:members:
TFT5ForConditionalGeneration
~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autoclass:: transformers.TFT5ForConditionalGeneration
:members:
+15 -8
View File
@@ -2,7 +2,7 @@
Starting with `v2.2.2`, you can now upload and share your fine-tuned models with the community, using the <abbr title="Command-line interface">CLI</abbr> that's built-in to the library.
**First, create an account on [https://huggingface.co/join](https://huggingface.co/join)**. Then:
**First, create an account on [https://huggingface.co/join](https://huggingface.co/join)**. Optionally, join an existing organization or create a new one. Then:
```shell
transformers-cli login
@@ -21,19 +21,26 @@ transformers-cli upload ./config.json [--filename folder/foobar.json]
# (you can optionally override its filename, which can be nested inside a folder)
```
Your model will then be accessible through its identifier, a concatenation of your username and the folder name above:
```python
"username/pretrained_model"
If you want your model to be namespaced by your organization name rather than your username, add the following flag to any command:
```shell
--organization organization_name
```
**Please add a README.md model card** to the repo under `model_cards/` with: model description, training params (dataset, preprocessing, hyperparameters), evaluation results, intended uses & limitations, etc.
Your model will then be accessible through its identifier, a concatenation of your username (or organization name) and the folder name above:
```python
"username/pretrained_model"
# or if an org:
"organization_name/pretrained_model"
```
**Please add a README.md model card** to the repo under `model_cards/` with: model description, training params (dataset, preprocessing, hardware used, hyperparameters), evaluation results, intended uses & limitations, etc.
Your model now has a page on huggingface.co/models 🔥
Anyone can load it from code:
```python
tokenizer = AutoTokenizer.from_pretrained("username/pretrained_model")
model = AutoModel.from_pretrained("username/pretrained_model")
tokenizer = AutoTokenizer.from_pretrained("namespace/pretrained_model")
model = AutoModel.from_pretrained("namespace/pretrained_model")
```
List all your files on S3:
@@ -45,4 +52,4 @@ You can also delete unneeded files:
```shell
transformers-cli s3 rm …
```
```
-4
View File
@@ -275,7 +275,6 @@ For a list that includes community-uploaded models, refer to `https://huggingfac
| | | | FlauBERT large architecture |
| | | (see `details <https://github.com/getalp/Flaubert>`__) |
+-------------------+------------------------------------------------------------+---------------------------------------------------------------------------------------------------------------------------------------+
+-------------------+------------------------------------------------------------+---------------------------------------------------------------------------------------------------------------------------------------+
| Bart | ``bart-large`` | | 12-layer, 1024-hidden, 16-heads, 406M parameters |
| | | (see `details <https://github.com/pytorch/fairseq/tree/master/examples/bart>`_) |
| +------------------------------------------------------------+---------------------------------------------------------------------------------------------------------------------------------------+
@@ -285,6 +284,3 @@ For a list that includes community-uploaded models, refer to `https://huggingfac
| | ``bart-large-cnn`` | | 12-layer, 1024-hidden, 16-heads, 406M parameters (same as base) |
| | | | bart-large base architecture finetuned on cnn summarization task |
+-------------------+------------------------------------------------------------+---------------------------------------------------------------------------------------------------------------------------------------+
.. <https://huggingface.co/transformers/examples.html>`__
+155 -22
View File
@@ -24,7 +24,15 @@ import timeit
from time import time
from typing import List
from transformers import AutoConfig, AutoTokenizer, is_tf_available, is_torch_available
from transformers import (
AutoConfig,
AutoTokenizer,
MemorySummary,
is_tf_available,
is_torch_available,
start_memory_tracing,
stop_memory_tracing,
)
if is_tf_available():
@@ -250,15 +258,21 @@ as they entered."""
def create_setup_and_compute(
model_names: List[str],
batch_sizes: List[int],
slice_sizes: List[int],
gpu: bool = True,
tensorflow: bool = False,
average_over: int = 3,
no_speed: bool = False,
no_memory: bool = False,
verbose: bool = False,
torchscript: bool = False,
xla: bool = False,
amp: bool = False,
fp16: bool = False,
save_to_csv: bool = False,
csv_filename: str = f"results_{round(time())}.csv",
csv_memory_filename: str = f"memory_{round(time())}.csv",
):
if xla:
tf.config.optimizer.set_jit(True)
@@ -267,11 +281,25 @@ def create_setup_and_compute(
if tensorflow:
dictionary = {model_name: {} for model_name in model_names}
results = _compute_tensorflow(model_names, dictionary, average_over, amp)
results = _compute_tensorflow(
model_names, batch_sizes, slice_sizes, dictionary, average_over, amp, no_speed, no_memory, verbose
)
else:
device = "cuda" if (gpu and torch.cuda.is_available()) else "cpu"
dictionary = {model_name: {} for model_name in model_names}
results = _compute_pytorch(model_names, dictionary, average_over, device, torchscript, fp16)
results = _compute_pytorch(
model_names,
batch_sizes,
slice_sizes,
dictionary,
average_over,
device,
torchscript,
fp16,
no_speed,
no_memory,
verbose,
)
print("=========== RESULTS ===========")
for model_name in model_names:
@@ -280,13 +308,19 @@ def create_setup_and_compute(
print("\t\t" + f"===== BATCH SIZE: {batch_size} =====")
for slice_size in results[model_name]["ss"]:
result = results[model_name]["results"][batch_size][slice_size]
memory = results[model_name]["memory"][batch_size][slice_size]
if isinstance(result, str):
print(f"\t\t{model_name}/{batch_size}/{slice_size}: " f"{result}")
print(f"\t\t{model_name}/{batch_size}/{slice_size}: " f"{result} " f"{memory}")
else:
print(f"\t\t{model_name}/{batch_size}/{slice_size}: " f"{(round(1000 * result) / 1000)}" f"s")
print(
f"\t\t{model_name}/{batch_size}/{slice_size}: "
f"{(round(1000 * result) / 1000)}"
f"s "
f"{memory}"
)
if save_to_csv:
with open(csv_filename, mode="w") as csv_file:
with open(csv_filename, mode="w") as csv_file, open(csv_memory_filename, mode="w") as csv_memory_file:
fieldnames = [
"model",
"1x8",
@@ -317,6 +351,8 @@ def create_setup_and_compute(
writer = csv.DictWriter(csv_file, fieldnames=fieldnames)
writer.writeheader()
memory_writer = csv.DictWriter(csv_memory_file, fieldnames=fieldnames)
memory_writer.writeheader()
for model_name in model_names:
model_results = {
@@ -326,8 +362,52 @@ def create_setup_and_compute(
}
writer.writerow({"model": model_name, **model_results})
model_memory_results = {
f"{bs}x{ss}": results[model_name]["memory"][bs][ss]
for bs in results[model_name]["memory"]
for ss in results[model_name]["memory"][bs]
}
memory_writer.writerow({"model": model_name, **model_memory_results})
def _compute_pytorch(model_names, dictionary, average_over, device, torchscript, fp16):
def print_summary_statistics(summary: MemorySummary):
print(
"\nLines by line memory consumption:\n"
+ "\n".join(
f"{state.frame.filename}:{state.frame.line_number}: mem {state.cpu_gpu}: {state.frame.line_text}"
for state in summary.sequential
)
)
print(
"\nLines with top memory consumption:\n"
+ "\n".join(
f"=> {state.frame.filename}:{state.frame.line_number}: mem {state.cpu_gpu}: {state.frame.line_text}"
for state in summary.cumulative[:6]
)
)
print(
"\nLines with lowest memory consumption:\n"
+ "\n".join(
f"=> {state.frame.filename}:{state.frame.line_number}: mem {state.cpu_gpu}: {state.frame.line_text}"
for state in summary.cumulative[-6:]
)
)
print(f"\nTotal memory increase: {summary.total}")
def _compute_pytorch(
model_names,
batch_sizes,
slice_sizes,
dictionary,
average_over,
device,
torchscript,
fp16,
no_speed,
no_memory,
verbose,
):
for c, model_name in enumerate(model_names):
print(f"{c + 1} / {len(model_names)}")
config = AutoConfig.from_pretrained(model_name, torchscript=torchscript)
@@ -337,17 +417,17 @@ def _compute_pytorch(model_names, dictionary, average_over, device, torchscript,
tokenized_sequence = tokenizer.encode(input_text, add_special_tokens=False)
max_input_size = tokenizer.max_model_input_sizes[model_name]
batch_sizes = [1, 2, 4, 8]
slice_sizes = [8, 64, 128, 256, 512, 1024]
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}}
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}, "memory": {}}
dictionary[model_name]["results"] = {i: {} for i in batch_sizes}
dictionary[model_name]["memory"] = {i: {} for i in batch_sizes}
for batch_size in batch_sizes:
if fp16:
model.half()
model.to(device)
model.eval()
for slice_size in slice_sizes:
if max_input_size is not None and slice_size > max_input_size:
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
@@ -362,18 +442,40 @@ def _compute_pytorch(model_names, dictionary, average_over, device, torchscript,
inference = model
inference(sequence)
print("Going through model with sequence of shape", sequence.shape)
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
if not no_memory:
# model.add_memory_hooks() # Forward method tracing (only for PyTorch models)
# Line by line memory tracing (all code in the module `transformers`) works for all models/arbitrary code
trace = start_memory_tracing("transformers")
inference(sequence)
summary = stop_memory_tracing(trace)
if verbose:
print_summary_statistics(summary)
dictionary[model_name]["memory"][batch_size][slice_size] = str(summary.total)
else:
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
if not no_speed:
print("Going through model with sequence of shape", sequence.shape)
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
else:
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
except RuntimeError as e:
print("Doesn't fit on GPU.", e)
torch.cuda.empty_cache()
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
return dictionary
def _compute_tensorflow(model_names, dictionary, average_over, amp):
def _compute_tensorflow(
model_names, batch_sizes, slice_sizes, dictionary, average_over, amp, no_speed, no_memory, verbose
):
for c, model_name in enumerate(model_names):
print(f"{c + 1} / {len(model_names)}")
config = AutoConfig.from_pretrained(model_name)
@@ -383,11 +485,10 @@ def _compute_tensorflow(model_names, dictionary, average_over, amp):
tokenized_sequence = tokenizer.encode(input_text, add_special_tokens=False)
max_input_size = tokenizer.max_model_input_sizes[model_name]
batch_sizes = [1, 2, 4, 8]
slice_sizes = [8, 64, 128, 256, 512, 1024]
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}}
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}, "memory": {}}
dictionary[model_name]["results"] = {i: {} for i in batch_sizes}
dictionary[model_name]["memory"] = {i: {} for i in batch_sizes}
print("Using model", model)
@@ -409,13 +510,30 @@ def _compute_tensorflow(model_names, dictionary, average_over, amp):
# To make sure that the model is traced + that the tensors are on the appropriate device
inference(sequence)
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
if not no_memory:
# Line by line memory tracing (all code in the module `transformers`) works for all models/arbitrary code
trace = start_memory_tracing("transformers")
inference(sequence)
summary = stop_memory_tracing(trace)
if verbose:
print_summary_statistics(summary)
dictionary[model_name]["memory"][batch_size][slice_size] = str(summary.total)
else:
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
if not no_speed:
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
else:
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
except tf.errors.ResourceExhaustedError as e:
print("Doesn't fit on GPU.", e)
torch.cuda.empty_cache()
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
return dictionary
@@ -433,6 +551,9 @@ def main():
"of all available model "
"architectures.",
)
parser.add_argument("--verbose", required=False, action="store_true", help="Verbose memory tracing")
parser.add_argument("--no_speed", required=False, action="store_true", help="Don't perform speed measurments")
parser.add_argument("--no_memory", required=False, action="store_true", help="Don't perform memory measurments")
parser.add_argument(
"--torch", required=False, action="store_true", help="Benchmark the Pytorch version of the " "models"
)
@@ -477,6 +598,8 @@ def main():
parser.add_argument(
"--average_over", required=False, default=30, type=int, help="Times an experiment will be run."
)
parser.add_argument("--batch_sizes", nargs="+", type=int, default=[1, 2, 4, 8])
parser.add_argument("--slice_sizes", nargs="+", type=int, default=[8, 64, 128, 256, 512, 1024])
args = parser.parse_args()
if args.models == "all":
@@ -501,6 +624,8 @@ def main():
if is_torch_available():
create_setup_and_compute(
model_names=args.models,
batch_sizes=args.batch_sizes,
slice_sizes=args.slice_sizes,
tensorflow=False,
gpu=args.torch_cuda,
torchscript=args.torchscript,
@@ -508,6 +633,9 @@ def main():
save_to_csv=args.save_to_csv,
csv_filename=args.csv_filename,
average_over=args.average_over,
no_speed=args.no_speed,
no_memory=args.no_memory,
verbose=args.verbose,
)
else:
raise ImportError("Trying to run a PyTorch benchmark but PyTorch was not found in the environment.")
@@ -516,12 +644,17 @@ def main():
if is_tf_available():
create_setup_and_compute(
model_names=args.models,
batch_sizes=args.batch_sizes,
slice_sizes=args.slice_sizes,
tensorflow=True,
xla=args.xla,
amp=args.amp,
save_to_csv=args.save_to_csv,
csv_filename=args.csv_filename,
average_over=args.average_over,
no_speed=args.no_speed,
no_memory=args.no_memory,
verbose=args.verbose,
)
else:
raise ImportError("Trying to run a TensorFlow benchmark but TensorFlow was not found in the environment.")
+1 -1
View File
@@ -249,8 +249,8 @@ def main():
losses = model(input_ids, mc_token_ids=mc_token_ids, lm_labels=lm_labels, mc_labels=mc_labels)
loss = args.lm_coef * losses[0] + losses[1]
loss.backward()
scheduler.step()
optimizer.step()
scheduler.step()
optimizer.zero_grad()
tr_loss += loss.item()
exp_average_loss = (
+1 -1
View File
@@ -3,5 +3,5 @@ transformers
gitpython==3.0.2
tensorboard>=1.14.0
tensorboardX==1.8
psutil==5.6.3
psutil==5.6.6
scipy==1.3.1
+9
View File
@@ -0,0 +1,9 @@
# GLUE Benchmark
Based on the script [`run_glue.py`](https://github.com/huggingface/transformers/blob/master/examples/run_glue.py).
#### Run PyTorch version using PyTorch-Lightning
Run `bash run_pl.sh` from the `glue` directory. This will also install `pytorch-lightning` and the requirements in `examples/requirements.txt`. It is a shell pipeline that will automatically download, pre-process the data and run the specified models. Logs are saved in `lightning_logs` directory.
Pass `--n_gpu` flag to change the number of GPUs. Default uses 1. At the end, the expected results are: `TEST RESULTS {'val_loss': tensor(0.0707), 'precision': 0.852427800698191, 'recall': 0.869537067011978, 'f1': 0.8608974358974358}`
+38
View File
@@ -0,0 +1,38 @@
# Install newest ptl.
pip install -U git+http://github.com/PyTorchLightning/pytorch-lightning/
# Install example requirements
pip install -r ../requirements.txt
# Download glue data
python3 ../../utils/download_glue_data.py
export TASK=mrpc
export DATA_DIR=./glue_data/MRPC/
export MAX_LENGTH=128
export LEARNING_RATE=2e-5
export BERT_MODEL=bert-base-cased
export MODEL_TYPE=bert
export BATCH_SIZE=32
export NUM_EPOCHS=3
export SEED=2
export OUTPUT_DIR_NAME=mrpc-pl-bert
export CURRENT_DIR=${PWD}
export OUTPUT_DIR=${CURRENT_DIR}/${OUTPUT_DIR_NAME}
# Make output directory if it doesn't exist
mkdir -p $OUTPUT_DIR
# Add parent directory to python path to access transformer_base.py
export PYTHONPATH="../":"${PYTHONPATH}"
python3 run_pl_glue.py --data_dir $DATA_DIR \
--model_type $MODEL_TYPE \
--task $TASK \
--model_name_or_path $BERT_MODEL \
--output_dir $OUTPUT_DIR \
--max_seq_length $MAX_LENGTH \
--learning_rate $LEARNING_RATE \
--num_train_epochs $NUM_EPOCHS \
--train_batch_size $BATCH_SIZE \
--seed $SEED \
--do_train \
--do_predict
+196
View File
@@ -0,0 +1,196 @@
import argparse
import glob
import logging
import os
import time
import numpy as np
import torch
from torch.utils.data import DataLoader, TensorDataset
from transformer_base import BaseTransformer, add_generic_args, generic_train
from transformers import glue_compute_metrics as compute_metrics
from transformers import glue_convert_examples_to_features as convert_examples_to_features
from transformers import glue_output_modes
from transformers import glue_processors as processors
from transformers import glue_tasks_num_labels
logger = logging.getLogger(__name__)
class GLUETransformer(BaseTransformer):
mode = "sequence-classification"
def __init__(self, hparams):
hparams.glue_output_mode = glue_output_modes[hparams.task]
num_labels = glue_tasks_num_labels[hparams.task]
super().__init__(hparams, num_labels, self.mode)
def forward(self, **inputs):
return self.model(**inputs)
def training_step(self, batch, batch_idx):
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.hparams.model_type != "distilbert":
inputs["token_type_ids"] = batch[2] if self.hparams.model_type in ["bert", "xlnet", "albert"] else None
outputs = self(**inputs)
loss = outputs[0]
tensorboard_logs = {"loss": loss, "rate": self.lr_scheduler.get_last_lr()[-1]}
return {"loss": loss, "log": tensorboard_logs}
def prepare_data(self):
"Called to initialize data. Use the call to construct features"
args = self.hparams
processor = processors[args.task]()
self.labels = processor.get_labels()
for mode in ["train", "dev"]:
cached_features_file = self._feature_file(mode)
if not os.path.exists(cached_features_file) and not args.overwrite_cache:
logger.info("Creating features from dataset file at %s", args.data_dir)
examples = (
processor.get_dev_examples(args.data_dir)
if mode == "dev"
else processor.get_train_examples(args.data_dir)
)
features = convert_examples_to_features(
examples,
self.tokenizer,
max_length=args.max_seq_length,
task=args.task,
label_list=self.labels,
output_mode=args.glue_output_mode,
pad_on_left=bool(args.model_type in ["xlnet"]), # pad on the left for xlnet
pad_token=self.tokenizer.convert_tokens_to_ids([self.tokenizer.pad_token])[0],
pad_token_segment_id=4 if args.model_type in ["xlnet"] else 0,
)
logger.info("Saving features into cached file %s", cached_features_file)
torch.save(features, cached_features_file)
def load_dataset(self, mode, batch_size):
"Load datasets. Called after prepare data."
# We test on dev set to compare to benchmarks without having to submit to GLUE server
mode = "dev" if mode == "test" else mode
cached_features_file = self._feature_file(mode)
logger.info("Loading features from cached file %s", cached_features_file)
features = torch.load(cached_features_file)
all_input_ids = torch.tensor([f.input_ids for f in features], dtype=torch.long)
all_attention_mask = torch.tensor([f.attention_mask for f in features], dtype=torch.long)
all_token_type_ids = torch.tensor([f.token_type_ids for f in features], dtype=torch.long)
if self.hparams.glue_output_mode == "classification":
all_labels = torch.tensor([f.label for f in features], dtype=torch.long)
elif self.hparams.glue_output_mode == "regression":
all_labels = torch.tensor([f.label for f in features], dtype=torch.float)
return DataLoader(
TensorDataset(all_input_ids, all_attention_mask, all_token_type_ids, all_labels),
batch_size=batch_size,
shuffle=True,
)
def validation_step(self, batch, batch_idx):
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.hparams.model_type != "distilbert":
inputs["token_type_ids"] = batch[2] if self.hparams.model_type in ["bert", "xlnet", "albert"] else None
outputs = self(**inputs)
tmp_eval_loss, logits = outputs[:2]
preds = logits.detach().cpu().numpy()
out_label_ids = inputs["labels"].detach().cpu().numpy()
return {"val_loss": tmp_eval_loss.detach().cpu(), "pred": preds, "target": out_label_ids}
def _eval_end(self, outputs):
val_loss_mean = torch.stack([x["val_loss"] for x in outputs]).mean().detach().cpu().item()
preds = np.concatenate([x["pred"] for x in outputs], axis=0)
if self.hparams.glue_output_mode == "classification":
preds = np.argmax(preds, axis=1)
elif self.hparams.glue_output_mode == "regression":
preds = np.squeeze(preds)
out_label_ids = np.concatenate([x["target"] for x in outputs], axis=0)
out_label_list = [[] for _ in range(out_label_ids.shape[0])]
preds_list = [[] for _ in range(out_label_ids.shape[0])]
results = {**{"val_loss": val_loss_mean}, **compute_metrics(self.hparams.task, preds, out_label_ids)}
ret = {k: v for k, v in results.items()}
ret["log"] = results
return ret, preds_list, out_label_list
def validation_end(self, outputs: list) -> dict:
ret, preds, targets = self._eval_end(outputs)
logs = ret["log"]
return {"val_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
def test_epoch_end(self, outputs):
# updating to test_epoch_end instead of deprecated test_end
ret, predictions, targets = self._eval_end(outputs)
# Converting to the dic required by pl
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master/\
# pytorch_lightning/trainer/logging.py#L139
logs = ret["log"]
# `val_loss` is the key returned by `self._eval_end()` but actually refers to `test_loss`
return {"avg_test_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
@staticmethod
def add_model_specific_args(parser, root_dir):
# Add NER specific options
BaseTransformer.add_model_specific_args(parser, root_dir)
parser.add_argument(
"--max_seq_length",
default=128,
type=int,
help="The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--task", default="", type=str, required=True, help="The GLUE task to run",
)
parser.add_argument(
"--data_dir",
default=None,
type=str,
required=True,
help="The input data dir. Should contain the training files for the CoNLL-2003 NER task.",
)
parser.add_argument(
"--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets"
)
return parser
if __name__ == "__main__":
parser = argparse.ArgumentParser()
add_generic_args(parser, os.getcwd())
parser = GLUETransformer.add_model_specific_args(parser, os.getcwd())
args = parser.parse_args()
# If output_dir not provided, a folder will be generated in pwd
if args.output_dir is None:
args.output_dir = os.path.join("./results", f"{args.task}_{args.model_type}_{time.strftime('%Y%m%d_%H%M%S')}",)
os.makedirs(args.output_dir)
model = GLUETransformer(args)
trainer = generic_train(model, args)
# Optionally, predict on dev set and write to output_dir
if args.do_predict:
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpointepoch=*.ckpt"), recursive=True)))
GLUETransformer.load_from_checkpoint(checkpoints[-1])
trainer.test(model)
+7
View File
@@ -112,6 +112,13 @@ Here is a small comparison between BERT (large, cased), RoBERTa (large, cased) a
| `roberta-large` | 95.96 | 91.87
| `distilbert-base-uncased` | 94.34 | 90.32
#### Run PyTorch version using PyTorch-Lightning
Run `bash run_pl.sh` from the `ner` directory. This would also install `pytorch-lightning` and the `examples/requirements.txt`. It is a shell pipeline which would automatically download, pre-process the data and run the models in `germeval-model` directory. Logs are saved in `lightning_logs` directory.
Pass `--n_gpu` flag to change the number of GPUs. Default uses 1. At the end, the expected results are: `TEST RESULTS {'val_loss': tensor(0.0707), 'precision': 0.852427800698191, 'recall': 0.869537067011978, 'f1': 0.8608974358974358}`
### Run the Tensorflow 2 version
To start training, just run:
+16 -43
View File
@@ -31,26 +31,12 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
WEIGHTS_NAME,
AdamW,
AlbertConfig,
AlbertForTokenClassification,
AlbertTokenizer,
BertConfig,
BertForTokenClassification,
BertTokenizer,
CamembertConfig,
CamembertForTokenClassification,
CamembertTokenizer,
DistilBertConfig,
DistilBertForTokenClassification,
DistilBertTokenizer,
RobertaConfig,
RobertaForTokenClassification,
RobertaTokenizer,
XLMRobertaConfig,
XLMRobertaForTokenClassification,
XLMRobertaTokenizer,
AutoConfig,
AutoModelForTokenClassification,
AutoTokenizer,
get_linear_schedule_with_warmup,
)
from utils_ner import convert_examples_to_features, get_labels, read_examples_from_file
@@ -64,22 +50,10 @@ except ImportError:
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (BertConfig, RobertaConfig, DistilBertConfig, CamembertConfig, XLMRobertaConfig)
),
(),
)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"albert": (AlbertConfig, AlbertForTokenClassification, AlbertTokenizer),
"bert": (BertConfig, BertForTokenClassification, BertTokenizer),
"roberta": (RobertaConfig, RobertaForTokenClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForTokenClassification, DistilBertTokenizer),
"camembert": (CamembertConfig, CamembertForTokenClassification, CamembertTokenizer),
"xlmroberta": (XLMRobertaConfig, XLMRobertaForTokenClassification, XLMRobertaTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), ())
TOKENIZER_ARGS = ["do_lower_case", "strip_accents", "keep_accents", "use_fast"]
@@ -222,8 +196,8 @@ def train(args, train_dataset, model, tokenizer, labels, pad_token_label_id):
else:
torch.nn.utils.clip_grad_norm_(model.parameters(), args.max_grad_norm)
scheduler.step() # Update learning rate schedule
optimizer.step()
scheduler.step() # Update learning rate schedule
model.zero_grad()
global_step += 1
@@ -411,7 +385,7 @@ def main():
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_TYPES),
)
parser.add_argument(
"--model_name_or_path",
@@ -594,8 +568,7 @@ def main():
torch.distributed.barrier() # Make sure only the first process in distributed training will download model & vocab
args.model_type = args.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args.config_name if args.config_name else args.model_name_or_path,
num_labels=num_labels,
id2label={str(i): label for i, label in enumerate(labels)},
@@ -604,12 +577,12 @@ def main():
)
tokenizer_args = {k: v for k, v in vars(args).items() if v is not None and k in TOKENIZER_ARGS}
logger.info("Tokenizer arguments: %s", tokenizer_args)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
cache_dir=args.cache_dir if args.cache_dir else None,
**tokenizer_args,
)
model = model_class.from_pretrained(
model = AutoModelForTokenClassification.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -650,7 +623,7 @@ def main():
# Evaluation
results = {}
if args.do_eval and args.local_rank in [-1, 0]:
tokenizer = tokenizer_class.from_pretrained(args.output_dir, **tokenizer_args)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, **tokenizer_args)
checkpoints = [args.output_dir]
if args.eval_all_checkpoints:
checkpoints = list(
@@ -660,7 +633,7 @@ def main():
logger.info("Evaluate the following checkpoints: %s", checkpoints)
for checkpoint in checkpoints:
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
model = model_class.from_pretrained(checkpoint)
model = AutoModelForTokenClassification.from_pretrained(checkpoint)
model.to(args.device)
result, _ = evaluate(args, model, tokenizer, labels, pad_token_label_id, mode="dev", prefix=global_step)
if global_step:
@@ -672,8 +645,8 @@ def main():
writer.write("{} = {}\n".format(key, str(results[key])))
if args.do_predict and args.local_rank in [-1, 0]:
tokenizer = tokenizer_class.from_pretrained(args.output_dir, **tokenizer_args)
model = model_class.from_pretrained(args.output_dir)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, **tokenizer_args)
model = AutoModelForTokenClassification.from_pretrained(args.output_dir)
model.to(args.device)
result, predictions = evaluate(args, model, tokenizer, labels, pad_token_label_id, mode="test")
# Save results
Regular → Executable
+14 -6
View File
@@ -1,6 +1,9 @@
#!/usr/bin/env bash
# Install newest ptl.
pip install -U git+http://github.com/PyTorchLightning/pytorch-lightning/
# for seqeval metrics import
pip install -r ../requirements.txt
curl -L 'https://sites.google.com/site/germeval2014ner/data/NER-de-train.tsv?attredirects=0&d=1' \
| grep -v "^#" | cut -f 2,3 | tr '\t' ' ' > train.txt.tmp
@@ -15,12 +18,18 @@ python3 preprocess.py train.txt.tmp $BERT_MODEL $MAX_LENGTH > train.txt
python3 preprocess.py dev.txt.tmp $BERT_MODEL $MAX_LENGTH > dev.txt
python3 preprocess.py test.txt.tmp $BERT_MODEL $MAX_LENGTH > test.txt
cat train.txt dev.txt test.txt | cut -d " " -f 2 | grep -v "^$"| sort | uniq > labels.txt
export OUTPUT_DIR=germeval-model
export BATCH_SIZE=32
export NUM_EPOCHS=3
export SAVE_STEPS=750
export SEED=1
export OUTPUT_DIR_NAME=germeval-model
export CURRENT_DIR=${PWD}
export OUTPUT_DIR=${CURRENT_DIR}/${OUTPUT_DIR_NAME}
mkdir -p $OUTPUT_DIR
# Add parent directory to python path to access transformer_base.py
export PYTHONPATH="../":"${PYTHONPATH}"
python3 run_pl_ner.py --data_dir ./ \
--model_type bert \
--labels ./labels.txt \
@@ -28,8 +37,7 @@ python3 run_pl_ner.py --data_dir ./ \
--output_dir $OUTPUT_DIR \
--max_seq_length $MAX_LENGTH \
--num_train_epochs $NUM_EPOCHS \
--train_batch_size 32 \
--save_steps $SAVE_STEPS \
--train_batch_size $BATCH_SIZE \
--seed $SEED \
--do_train \
--do_predict
--do_predict
+23 -49
View File
@@ -21,11 +21,13 @@ class NERTransformer(BaseTransformer):
A training module for NER. See BaseTransformer for the core options.
"""
mode = "token-classification"
def __init__(self, hparams):
self.labels = get_labels(hparams.labels)
num_labels = len(self.labels)
self.pad_token_label_id = CrossEntropyLoss().ignore_index
super(NERTransformer, self).__init__(hparams, num_labels)
super(NERTransformer, self).__init__(hparams, num_labels, self.mode)
def forward(self, **inputs):
return self.model(**inputs)
@@ -38,21 +40,11 @@ class NERTransformer(BaseTransformer):
batch[2] if self.hparams.model_type in ["bert", "xlnet"] else None
) # XLM and RoBERTa don"t use segment_ids
outputs = self.forward(**inputs)
outputs = self(**inputs)
loss = outputs[0]
tensorboard_logs = {"loss": loss, "rate": self.lr_scheduler.get_last_lr()[-1]}
return {"loss": loss, "log": tensorboard_logs}
def _feature_file(self, mode):
return os.path.join(
self.hparams.data_dir,
"cached_{}_{}_{}".format(
mode,
list(filter(None, self.hparams.model_name_or_path.split("/"))).pop(),
str(self.hparams.max_seq_length),
),
)
def prepare_data(self):
"Called to initialize data. Use the call to construct features"
args = self.hparams
@@ -100,7 +92,7 @@ class NERTransformer(BaseTransformer):
inputs["token_type_ids"] = (
batch[2] if self.hparams.model_type in ["bert", "xlnet"] else None
) # XLM and RoBERTa don"t use segment_ids
outputs = self.forward(**inputs)
outputs = self(**inputs)
tmp_eval_loss, logits = outputs[:2]
preds = logits.detach().cpu().numpy()
out_label_ids = inputs["labels"].detach().cpu().numpy()
@@ -130,49 +122,27 @@ class NERTransformer(BaseTransformer):
"f1": f1_score(out_label_list, preds_list),
}
if self.is_logger():
logger.info("***** Eval results *****")
for key in sorted(results.keys()):
logger.info(" %s = %s", key, str(results[key]))
tensorboard_logs = results
ret = {k: v for k, v in results.items()}
ret["log"] = tensorboard_logs
ret["log"] = results
return ret, preds_list, out_label_list
def validation_end(self, outputs):
# todo: update to validation_epoch_end instead of deprecated validation_end
# when stable
ret, preds, targets = self._eval_end(outputs)
return ret
logs = ret["log"]
return {"val_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
def test_end(self, outputs):
def test_epoch_end(self, outputs):
# updating to test_epoch_end instead of deprecated test_end
ret, predictions, targets = self._eval_end(outputs)
if self.is_logger():
# Write output to a file:
# Save results
output_test_results_file = os.path.join(self.hparams.output_dir, "test_results.txt")
with open(output_test_results_file, "w") as writer:
for key in sorted(ret.keys()):
if key != "log":
writer.write("{} = {}\n".format(key, str(ret[key])))
# Save predictions
output_test_predictions_file = os.path.join(self.hparams.output_dir, "test_predictions.txt")
with open(output_test_predictions_file, "w") as writer:
with open(os.path.join(self.hparams.data_dir, "test.txt"), "r") as f:
example_id = 0
for line in f:
if line.startswith("-DOCSTART-") or line == "" or line == "\n":
writer.write(line)
if not predictions[example_id]:
example_id += 1
elif predictions[example_id]:
output_line = line.split()[0] + " " + predictions[example_id].pop(0) + "\n"
writer.write(output_line)
else:
logger.warning(
"Maximum sequence length exceeded: No prediction for '%s'.", line.split()[0]
)
return ret
# Converting to the dict required by pl
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master/\
# pytorch_lightning/trainer/logging.py#L139
logs = ret["log"]
# `val_loss` is the key returned by `self._eval_end()` but actually refers to `test_loss`
return {"avg_test_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
@staticmethod
def add_model_specific_args(parser, root_dir):
@@ -217,6 +187,10 @@ if __name__ == "__main__":
trainer = generic_train(model, args)
if args.do_predict:
checkpoints = list(sorted(glob.glob(args.output_dir + "/checkpoint_*.ckpt", recursive=True)))
# See https://github.com/huggingface/transformers/issues/3159
# pl use this format to create a checkpoint:
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master\
# /pytorch_lightning/callbacks/model_checkpoint.py#L169
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpointepoch=*.ckpt"), recursive=True)))
NERTransformer.load_from_checkpoint(checkpoints[-1])
trainer.test(model)
+15 -26
View File
@@ -13,16 +13,11 @@ from seqeval import metrics
from transformers import (
TF2_WEIGHTS_NAME,
BertConfig,
BertTokenizer,
DistilBertConfig,
DistilBertTokenizer,
TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
AutoConfig,
AutoTokenizer,
GradientAccumulator,
RobertaConfig,
RobertaTokenizer,
TFBertForTokenClassification,
TFDistilBertForTokenClassification,
TFRobertaForTokenClassification,
TFAutoModelForTokenClassification,
create_optimizer,
)
from utils_ner import convert_examples_to_features, get_labels, read_examples_from_file
@@ -34,22 +29,17 @@ except ImportError:
from fastprogress.fastprogress import master_bar, progress_bar
ALL_MODELS = sum(
(tuple(conf.pretrained_config_archive_map.keys()) for conf in (BertConfig, RobertaConfig, DistilBertConfig)), ()
)
MODEL_CONFIG_CLASSES = list(TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"bert": (BertConfig, TFBertForTokenClassification, BertTokenizer),
"roberta": (RobertaConfig, TFRobertaForTokenClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, TFDistilBertForTokenClassification, DistilBertTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), (),)
flags.DEFINE_string(
"data_dir", None, "The input data dir. Should contain the .conll files (or other data files) " "for the task."
)
flags.DEFINE_string("model_type", None, "Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()))
flags.DEFINE_string("model_type", None, "Model type selected in the list: " + ", ".join(MODEL_TYPES))
flags.DEFINE_string(
"model_name_or_path",
@@ -509,8 +499,7 @@ def main(_):
labels = get_labels(args["labels"])
num_labels = len(labels) + 1
pad_token_label_id = 0
config_class, model_class, tokenizer_class = MODEL_CLASSES[args["model_type"]]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args["config_name"] if args["config_name"] else args["model_name_or_path"],
num_labels=num_labels,
cache_dir=args["cache_dir"] if args["cache_dir"] else None,
@@ -520,14 +509,14 @@ def main(_):
# Training
if args["do_train"]:
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args["tokenizer_name"] if args["tokenizer_name"] else args["model_name_or_path"],
do_lower_case=args["do_lower_case"],
cache_dir=args["cache_dir"] if args["cache_dir"] else None,
)
with strategy.scope():
model = model_class.from_pretrained(
model = TFAutoModelForTokenClassification.from_pretrained(
args["model_name_or_path"],
from_pt=bool(".bin" in args["model_name_or_path"]),
config=config,
@@ -562,7 +551,7 @@ def main(_):
# Evaluation
if args["do_eval"]:
tokenizer = tokenizer_class.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
tokenizer = AutoTokenizer.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
checkpoints = []
results = []
@@ -584,7 +573,7 @@ def main(_):
global_step = checkpoint.split("-")[-1] if re.match(".*checkpoint-[0-9]", checkpoint) else "final"
with strategy.scope():
model = model_class.from_pretrained(checkpoint)
model = TFAutoModelForTokenClassification.from_pretrained(checkpoint)
y_true, y_pred, eval_loss = evaluate(
args, strategy, model, tokenizer, labels, pad_token_label_id, mode="dev"
@@ -611,8 +600,8 @@ def main(_):
writer.write("\n")
if args["do_predict"]:
tokenizer = tokenizer_class.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
model = model_class.from_pretrained(args["output_dir"])
tokenizer = AutoTokenizer.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
model = TFAutoModelForTokenClassification.from_pretrained(args["output_dir"])
eval_batch_size = args["per_device_eval_batch_size"] * args["n_device"]
predict_dataset, _ = load_and_cache_examples(
args, tokenizer, labels, pad_token_label_id, eval_batch_size, mode="test"
+7 -4
View File
@@ -112,12 +112,15 @@ def convert_examples_to_features(
label_ids = []
for word, label in zip(example.words, example.labels):
word_tokens = tokenizer.tokenize(word)
tokens.extend(word_tokens)
# Use the real label id for the first token of the word, and padding ids for the remaining tokens
label_ids.extend([label_map[label]] + [pad_token_label_id] * (len(word_tokens) - 1))
# bert-base-multilingual-cased sometimes output "nothing ([]) when calling tokenize with just a space.
if len(word_tokens) > 0:
tokens.extend(word_tokens)
# Use the real label id for the first token of the word, and padding ids for the remaining tokens
label_ids.extend([label_map[label]] + [pad_token_label_id] * (len(word_tokens) - 1))
# Account for [CLS] and [SEP] with "- 2" and with "- 3" for RoBERTa.
special_tokens_count = 3 if sep_token_extra else 2
special_tokens_count = tokenizer.num_added_tokens()
if len(tokens) > max_seq_length - special_tokens_count:
tokens = tokens[: (max_seq_length - special_tokens_count)]
label_ids = label_ids[: (max_seq_length - special_tokens_count)]
+4
View File
@@ -2,3 +2,7 @@ tensorboardX
tensorboard
scikit-learn
seqeval
psutil
sacrebleu
rouge-score
tensorflow_datasets
+20 -60
View File
@@ -30,32 +30,12 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING,
WEIGHTS_NAME,
AdamW,
AlbertConfig,
AlbertForSequenceClassification,
AlbertTokenizer,
BertConfig,
BertForSequenceClassification,
BertTokenizer,
DistilBertConfig,
DistilBertForSequenceClassification,
DistilBertTokenizer,
FlaubertConfig,
FlaubertForSequenceClassification,
FlaubertTokenizer,
RobertaConfig,
RobertaForSequenceClassification,
RobertaTokenizer,
XLMConfig,
XLMForSequenceClassification,
XLMRobertaConfig,
XLMRobertaForSequenceClassification,
XLMRobertaTokenizer,
XLMTokenizer,
XLNetConfig,
XLNetForSequenceClassification,
XLNetTokenizer,
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
get_linear_schedule_with_warmup,
)
from transformers import glue_compute_metrics as compute_metrics
@@ -72,33 +52,10 @@ except ImportError:
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (
BertConfig,
XLNetConfig,
XLMConfig,
RobertaConfig,
DistilBertConfig,
AlbertConfig,
XLMRobertaConfig,
FlaubertConfig,
)
),
(),
)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"bert": (BertConfig, BertForSequenceClassification, BertTokenizer),
"xlnet": (XLNetConfig, XLNetForSequenceClassification, XLNetTokenizer),
"xlm": (XLMConfig, XLMForSequenceClassification, XLMTokenizer),
"roberta": (RobertaConfig, RobertaForSequenceClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForSequenceClassification, DistilBertTokenizer),
"albert": (AlbertConfig, AlbertForSequenceClassification, AlbertTokenizer),
"xlmroberta": (XLMRobertaConfig, XLMRobertaForSequenceClassification, XLMRobertaTokenizer),
"flaubert": (FlaubertConfig, FlaubertForSequenceClassification, FlaubertTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), (),)
def set_seed(args):
@@ -233,7 +190,11 @@ def train(args, train_dataset, model, tokenizer):
loss.backward()
tr_loss += loss.item()
if (step + 1) % args.gradient_accumulation_steps == 0:
if (step + 1) % args.gradient_accumulation_steps == 0 or (
# last step in epoch but step is always smaller than gradient_accumulation_steps
len(epoch_iterator) <= args.gradient_accumulation_steps
and (step + 1) == len(epoch_iterator)
):
if args.fp16:
torch.nn.utils.clip_grad_norm_(amp.master_params(optimizer), args.max_grad_norm)
else:
@@ -438,7 +399,7 @@ def main():
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_TYPES),
)
parser.add_argument(
"--model_name_or_path",
@@ -618,19 +579,18 @@ def main():
torch.distributed.barrier() # Make sure only the first process in distributed training will download model & vocab
args.model_type = args.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args.config_name if args.config_name else args.model_name_or_path,
num_labels=num_labels,
finetuning_task=args.task_name,
cache_dir=args.cache_dir if args.cache_dir else None,
)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
do_lower_case=args.do_lower_case,
cache_dir=args.cache_dir if args.cache_dir else None,
)
model = model_class.from_pretrained(
model = AutoModelForSequenceClassification.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -669,14 +629,14 @@ def main():
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = model_class.from_pretrained(args.output_dir)
tokenizer = tokenizer_class.from_pretrained(args.output_dir)
model = AutoModelForSequenceClassification.from_pretrained(args.output_dir)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir)
model.to(args.device)
# Evaluation
results = {}
if args.do_eval and args.local_rank in [-1, 0]:
tokenizer = tokenizer_class.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
checkpoints = [args.output_dir]
if args.eval_all_checkpoints:
checkpoints = list(
@@ -688,7 +648,7 @@ def main():
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
prefix = checkpoint.split("/")[-1] if checkpoint.find("checkpoint") != -1 else ""
model = model_class.from_pretrained(checkpoint)
model = AutoModelForSequenceClassification.from_pretrained(checkpoint)
model.to(args.device)
result = evaluate(args, model, tokenizer, prefix=prefix)
result = dict((k + "_{}".format(global_step), v) for k, v in result.items())
+23 -40
View File
@@ -38,28 +38,14 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_WITH_LM_HEAD_MAPPING,
WEIGHTS_NAME,
AdamW,
BertConfig,
BertForMaskedLM,
BertTokenizer,
CamembertConfig,
CamembertForMaskedLM,
CamembertTokenizer,
DistilBertConfig,
DistilBertForMaskedLM,
DistilBertTokenizer,
GPT2Config,
GPT2LMHeadModel,
GPT2Tokenizer,
OpenAIGPTConfig,
OpenAIGPTLMHeadModel,
OpenAIGPTTokenizer,
AutoConfig,
AutoModelWithLMHead,
AutoTokenizer,
PreTrainedModel,
PreTrainedTokenizer,
RobertaConfig,
RobertaForMaskedLM,
RobertaTokenizer,
get_linear_schedule_with_warmup,
)
@@ -73,14 +59,8 @@ except ImportError:
logger = logging.getLogger(__name__)
MODEL_CLASSES = {
"gpt2": (GPT2Config, GPT2LMHeadModel, GPT2Tokenizer),
"openai-gpt": (OpenAIGPTConfig, OpenAIGPTLMHeadModel, OpenAIGPTTokenizer),
"bert": (BertConfig, BertForMaskedLM, BertTokenizer),
"roberta": (RobertaConfig, RobertaForMaskedLM, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForMaskedLM, DistilBertTokenizer),
"camembert": (CamembertConfig, CamembertForMaskedLM, CamembertTokenizer),
}
MODEL_CONFIG_CLASSES = list(MODEL_WITH_LM_HEAD_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
class TextDataset(Dataset):
@@ -693,23 +673,26 @@ def main():
if args.local_rank not in [-1, 0]:
torch.distributed.barrier() # Barrier to make sure only the first process in distributed training download model & vocab
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
if args.config_name:
config = config_class.from_pretrained(args.config_name, cache_dir=args.cache_dir)
config = AutoConfig.from_pretrained(args.config_name, cache_dir=args.cache_dir)
elif args.model_name_or_path:
config = config_class.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
config = AutoConfig.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
else:
config = config_class()
# When we release a pip version exposing CONFIG_MAPPING,
# we can do `config = CONFIG_MAPPING[args.model_type]()`.
raise ValueError(
"You are instantiating a new config instance from scratch. This is not supported, but you can do it from another script, save it,"
"and load it from here, using --config_name"
)
if args.tokenizer_name:
tokenizer = tokenizer_class.from_pretrained(args.tokenizer_name, cache_dir=args.cache_dir)
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, cache_dir=args.cache_dir)
elif args.model_name_or_path:
tokenizer = tokenizer_class.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
else:
raise ValueError(
"You are instantiating a new {} tokenizer. This is not supported, but you can do it from another script, save it,"
"and load it from here, using --tokenizer_name".format(tokenizer_class.__name__)
"You are instantiating a new tokenizer from scratch. This is not supported, but you can do it from another script, save it,"
"and load it from here, using --tokenizer_name"
)
if args.block_size <= 0:
@@ -719,7 +702,7 @@ def main():
args.block_size = min(args.block_size, tokenizer.max_len)
if args.model_name_or_path:
model = model_class.from_pretrained(
model = AutoModelWithLMHead.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -727,7 +710,7 @@ def main():
)
else:
logger.info("Training new model from scratch")
model = model_class(config=config)
model = AutoModelWithLMHead.from_config(config)
model.to(args.device)
@@ -768,8 +751,8 @@ def main():
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = model_class.from_pretrained(args.output_dir)
tokenizer = tokenizer_class.from_pretrained(args.output_dir)
model = AutoModelWithLMHead.from_pretrained(args.output_dir)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir)
model.to(args.device)
# Evaluation
@@ -786,7 +769,7 @@ def main():
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
prefix = checkpoint.split("/")[-1] if checkpoint.find("checkpoint") != -1 else ""
model = model_class.from_pretrained(checkpoint)
model = AutoModelWithLMHead.from_pretrained(checkpoint)
model.to(args.device)
result = evaluate(args, model, tokenizer, prefix=prefix)
result = dict((k + "_{}".format(global_step), v) for k, v in result.items())
+14 -45
View File
@@ -30,29 +30,12 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_FOR_QUESTION_ANSWERING_MAPPING,
WEIGHTS_NAME,
AdamW,
AlbertConfig,
AlbertForQuestionAnswering,
AlbertTokenizer,
BertConfig,
BertForQuestionAnswering,
BertTokenizer,
CamembertConfig,
CamembertForQuestionAnswering,
CamembertTokenizer,
DistilBertConfig,
DistilBertForQuestionAnswering,
DistilBertTokenizer,
RobertaConfig,
RobertaForQuestionAnswering,
RobertaTokenizer,
XLMConfig,
XLMForQuestionAnswering,
XLMTokenizer,
XLNetConfig,
XLNetForQuestionAnswering,
XLNetTokenizer,
AutoConfig,
AutoModelForQuestionAnswering,
AutoTokenizer,
get_linear_schedule_with_warmup,
squad_convert_examples_to_features,
)
@@ -72,23 +55,10 @@ except ImportError:
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (BertConfig, CamembertConfig, RobertaConfig, XLNetConfig, XLMConfig)
),
(),
)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_QUESTION_ANSWERING_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"bert": (BertConfig, BertForQuestionAnswering, BertTokenizer),
"camembert": (CamembertConfig, CamembertForQuestionAnswering, CamembertTokenizer),
"roberta": (RobertaConfig, RobertaForQuestionAnswering, RobertaTokenizer),
"xlnet": (XLNetConfig, XLNetForQuestionAnswering, XLNetTokenizer),
"xlm": (XLMConfig, XLMForQuestionAnswering, XLMTokenizer),
"distilbert": (DistilBertConfig, DistilBertForQuestionAnswering, DistilBertTokenizer),
"albert": (AlbertConfig, AlbertForQuestionAnswering, AlbertTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), (),)
def set_seed(args):
@@ -513,7 +483,7 @@ def main():
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_TYPES),
)
parser.add_argument(
"--model_name_or_path",
@@ -757,17 +727,16 @@ def main():
torch.distributed.barrier()
args.model_type = args.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args.config_name if args.config_name else args.model_name_or_path,
cache_dir=args.cache_dir if args.cache_dir else None,
)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
do_lower_case=args.do_lower_case,
cache_dir=args.cache_dir if args.cache_dir else None,
)
model = model_class.from_pretrained(
model = AutoModelForQuestionAnswering.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -817,8 +786,8 @@ def main():
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = model_class.from_pretrained(args.output_dir) # , force_download=True)
tokenizer = tokenizer_class.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
model = AutoModelForQuestionAnswering.from_pretrained(args.output_dir) # , force_download=True)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
model.to(args.device)
# Evaluation - we can ask to evaluate all the checkpoints (sub-directories) in a directory
@@ -842,7 +811,7 @@ def main():
for checkpoint in checkpoints:
# Reload the model
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
model = model_class.from_pretrained(checkpoint) # , force_download=True)
model = AutoModelForQuestionAnswering.from_pretrained(checkpoint) # , force_download=True)
model.to(args.device)
# Evaluate
+11 -4
View File
@@ -1,23 +1,29 @@
### Get the CNN/Daily Mail Data
### Get Preprocessed CNN Data
To be able to reproduce the authors' results on the CNN/Daily Mail dataset you first need to download both CNN and Daily Mail datasets [from Kyunghyun Cho's website](https://cs.nyu.edu/~kcho/DMQA/) (the links next to "Stories") in the same folder. Then uncompress the archives by running:
```bash
tar -xvf cnn_stories.tgz && tar -xvf dailymail_stories.tgz
wget https://s3.amazonaws.com/datasets.huggingface.co/summarization/cnn_dm.tgz
tar -xzvf cnn_dm.tgz
```
this should make a directory called cnn_dm/ with files like `test.source`.
To use your own data, copy that files format. Each article to be summarized is on its own line.
### Usage
### Evaluation
To create summaries for each article in dataset, run:
```bash
python evaluate_cnn.py <path_to_test.source> cnn_test_summaries.txt
```
the default batch size, 8, fits in 16GB GPU memory, but may need to be adjusted to fit your system.
### Training
Run/modify `run_train.sh`
### Where is the code?
The core model is in `src/transformers/modeling_bart.py`. This directory only contains examples.
### (WIP) Rouge Scores
## (WIP) Rouge Scores
### Stanford CoreNLP Setup
```
@@ -32,6 +38,7 @@ unzip stanford-corenlp-full-2018-10-05.zip
cd stanford-corenlp-full-2018-10-05
export CLASSPATH=stanford-corenlp-3.9.2.jar:stanford-corenlp-3.9.2-models.jar
```
Then run `ptb_tokenize` on `test.target` and your generated hypotheses.
### Rouge Setup
Install `files2rouge` following the instructions at [here](https://github.com/pltrdy/files2rouge).
I also needed to run `sudo apt-get install libxml-parser-perl`
+8 -2
View File
@@ -20,6 +20,10 @@ def generate_summaries(lns, out_file, batch_size=8, device=DEFAULT_DEVICE):
fout = Path(out_file).open("w")
model = BartForConditionalGeneration.from_pretrained("bart-large-cnn", output_past=True,).to(device)
tokenizer = BartTokenizer.from_pretrained("bart-large")
max_length = 140
min_length = 55
for batch in tqdm(list(chunks(lns, batch_size))):
dct = tokenizer.batch_encode_plus(batch, max_length=1024, return_tensors="pt", pad_to_max_length=True)
summaries = model.generate(
@@ -27,9 +31,11 @@ def generate_summaries(lns, out_file, batch_size=8, device=DEFAULT_DEVICE):
attention_mask=dct["attention_mask"].to(device),
num_beams=4,
length_penalty=2.0,
max_length=140,
min_len=55,
max_length=max_length + 2, # +2 from original because we start at step=1 and stop before max_length
min_length=min_length + 1, # +1 from original because we start at step=1
no_repeat_ngram_size=3,
early_stopping=True,
decoder_start_token_id=model.config.eos_token_id,
)
dec = [tokenizer.decode(g, skip_special_tokens=True, clean_up_tokenization_spaces=False) for g in summaries]
for hypothesis in dec:
+172
View File
@@ -0,0 +1,172 @@
import argparse
import glob
import logging
import os
import time
import torch
from torch.utils.data import DataLoader
from transformer_base import BaseTransformer, add_generic_args, generic_train, get_linear_schedule_with_warmup
from utils import SummarizationDataset
logger = logging.getLogger(__name__)
class BartSystem(BaseTransformer):
mode = "language-modeling"
def __init__(self, hparams):
super(BartSystem, self).__init__(hparams, num_labels=None, mode=self.mode)
def forward(
self, input_ids, attention_mask=None, decoder_input_ids=None, decoder_attention_mask=None, lm_labels=None
):
return self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
lm_labels=lm_labels,
)
def _step(self, batch):
y = batch["target_ids"]
y_ids = y[:, :-1].contiguous()
lm_labels = y[:, 1:].clone()
lm_labels[y[:, 1:] == self.tokenizer.pad_token_id] = -100
outputs = self(
input_ids=batch["source_ids"],
attention_mask=batch["source_mask"],
decoder_input_ids=y_ids,
lm_labels=lm_labels,
)
loss = outputs[0]
return loss
def training_step(self, batch, batch_idx):
loss = self._step(batch)
tensorboard_logs = {"train_loss": loss}
return {"loss": loss, "log": tensorboard_logs}
def validation_step(self, batch, batch_idx):
loss = self._step(batch)
return {"val_loss": loss}
def validation_end(self, outputs):
avg_loss = torch.stack([x["val_loss"] for x in outputs]).mean()
tensorboard_logs = {"val_loss": avg_loss}
return {"avg_val_loss": avg_loss, "log": tensorboard_logs}
def test_step(self, batch, batch_idx):
generated_ids = self.model.generate(
batch["source_ids"],
attention_mask=batch["source_mask"],
num_beams=1,
max_length=80,
repetition_penalty=2.5,
length_penalty=1.0,
early_stopping=True,
)
preds = [
self.tokenizer.decode(g, skip_special_tokens=True, clean_up_tokenization_spaces=True)
for g in generated_ids
]
target = [
self.tokenizer.decode(t, skip_special_tokens=True, clean_up_tokenization_spaces=True)
for t in batch["target_ids"]
]
loss = self._step(batch)
return {"val_loss": loss, "preds": preds, "target": target}
def test_end(self, outputs):
return self.validation_end(outputs)
def test_epoch_end(self, outputs):
output_test_predictions_file = os.path.join(self.hparams.output_dir, "test_predictions.txt")
output_test_targets_file = os.path.join(self.hparams.output_dir, "test_targets.txt")
# write predictions and targets for later rouge evaluation.
with open(output_test_predictions_file, "w+") as p_writer, open(output_test_targets_file, "w+") as t_writer:
for output_batch in outputs:
p_writer.writelines(s + "\n" for s in output_batch["preds"])
t_writer.writelines(s + "\n" for s in output_batch["target"])
p_writer.close()
t_writer.close()
return self.test_end(outputs)
def train_dataloader(self):
train_dataset = SummarizationDataset(
self.tokenizer, data_dir=self.hparams.data_dir, type_path="train", block_size=self.hparams.max_seq_length
)
dataloader = DataLoader(train_dataset, batch_size=self.hparams.train_batch_size)
t_total = (
(len(dataloader.dataset) // (self.hparams.train_batch_size * max(1, self.hparams.n_gpu)))
// self.hparams.gradient_accumulation_steps
* float(self.hparams.num_train_epochs)
)
scheduler = get_linear_schedule_with_warmup(
self.opt, num_warmup_steps=self.hparams.warmup_steps, num_training_steps=t_total
)
self.lr_scheduler = scheduler
return dataloader
def val_dataloader(self):
val_dataset = SummarizationDataset(
self.tokenizer, data_dir=self.hparams.data_dir, type_path="val", block_size=self.hparams.max_seq_length
)
return DataLoader(val_dataset, batch_size=self.hparams.eval_batch_size)
def test_dataloader(self):
test_dataset = SummarizationDataset(
self.tokenizer, data_dir=self.hparams.data_dir, type_path="test", block_size=self.hparams.max_seq_length
)
return DataLoader(test_dataset, batch_size=self.hparams.eval_batch_size)
@staticmethod
def add_model_specific_args(parser, root_dir):
BaseTransformer.add_model_specific_args(parser, root_dir)
# Add BART specific options
parser.add_argument(
"--max_seq_length",
default=1024,
type=int,
help="The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--data_dir",
default=None,
type=str,
required=True,
help="The input data dir. Should contain the dataset files for the CNN/DM summarization task.",
)
return parser
if __name__ == "__main__":
parser = argparse.ArgumentParser()
add_generic_args(parser, os.getcwd())
parser = BartSystem.add_model_specific_args(parser, os.getcwd())
args = parser.parse_args()
# If output_dir not provided, a folder will be generated in pwd
if args.output_dir is None:
args.output_dir = os.path.join("./results", f"{args.task}_{args.model_type}_{time.strftime('%Y%m%d_%H%M%S')}",)
os.makedirs(args.output_dir)
model = BartSystem(args)
trainer = generic_train(model, args)
# Optionally, predict on dev set and write to output_dir
if args.do_predict:
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpointepoch=*.ckpt"), recursive=True)))
BartSystem.load_from_checkpoint(checkpoints[-1])
trainer.test(model)
+23
View File
@@ -0,0 +1,23 @@
# Install newest ptl.
pip install -U git+http://github.com/PyTorchLightning/pytorch-lightning/
export OUTPUT_DIR_NAME=bart_sum
export CURRENT_DIR=${PWD}
export OUTPUT_DIR=${CURRENT_DIR}/${OUTPUT_DIR_NAME}
# Make output directory if it doesn't exist
mkdir -p $OUTPUT_DIR
# Add parent directory to python path to access transformer_base.py
export PYTHONPATH="../../":"${PYTHONPATH}"
python run_bart_sum.py \
--data_dir=./cnn-dailymail/cnn_dm \
--model_type=bart \
--model_name_or_path=bart-large \
--learning_rate=3e-5 \
--train_batch_size=4 \
--eval_batch_size=4 \
--output_dir=$OUTPUT_DIR \
--do_train
@@ -1,4 +1,5 @@
import logging
import os
import sys
import tempfile
import unittest
@@ -8,6 +9,8 @@ from unittest.mock import patch
from .evaluate_cnn import _run_generate
output_file_name = "output_bart_sum.txt"
articles = [" New York (CNN)When Liana Barrientos was 23 years old, she got married in Westchester County."]
logging.basicConfig(level=logging.DEBUG)
@@ -19,10 +22,11 @@ class TestBartExamples(unittest.TestCase):
def test_bart_cnn_cli(self):
stream_handler = logging.StreamHandler(sys.stdout)
logger.addHandler(stream_handler)
tmp = Path(tempfile.gettempdir()) / "utest_generations.hypo"
tmp = Path(tempfile.gettempdir()) / "utest_generations_bart_sum.hypo"
with tmp.open("w") as f:
f.write("\n".join(articles))
testargs = ["evaluate_cnn.py", str(tmp), "output.txt"]
testargs = ["evaluate_cnn.py", str(tmp), output_file_name]
with patch.object(sys, "argv", testargs):
_run_generate()
self.assertTrue(Path("output.txt").exists())
self.assertTrue(Path(output_file_name).exists())
os.remove(Path(output_file_name))
+43
View File
@@ -0,0 +1,43 @@
import os
from torch.utils.data import Dataset
class SummarizationDataset(Dataset):
def __init__(self, tokenizer, data_dir="./cnn-dailymail/cnn_dm/", type_path="train", block_size=1024):
super(SummarizationDataset,).__init__()
self.tokenizer = tokenizer
self.source = []
self.target = []
print("loading " + type_path + " source.")
with open(os.path.join(data_dir, type_path + ".source"), "r") as f:
for text in f.readlines(): # each text is a line and a full story
tokenized = tokenizer.batch_encode_plus(
[text], max_length=block_size, pad_to_max_length=True, return_tensors="pt"
)
self.source.append(tokenized)
f.close()
print("loading " + type_path + " target.")
with open(os.path.join(data_dir, type_path + ".target"), "r") as f:
for text in f.readlines(): # each text is a line and a summary
tokenized = tokenizer.batch_encode_plus(
[text], max_length=56, pad_to_max_length=True, return_tensors="pt"
)
self.target.append(tokenized)
f.close()
def __len__(self):
return len(self.source)
def __getitem__(self, index):
source_ids = self.source[index]["input_ids"].squeeze()
target_ids = self.target[index]["input_ids"].squeeze()
src_mask = self.source[index]["attention_mask"].squeeze() # might need to squeeze
return {"source_ids": source_ids, "source_mask": src_mask, "target_ids": target_ids}
@@ -23,7 +23,7 @@ logger = logging.getLogger(__name__)
BERTABS_FINETUNED_CONFIG_MAP = {
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization-config.json",
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization/config.json",
}
@@ -157,7 +157,7 @@ def convert_bertabs_checkpoints(path_to_checkpoints, dump_path):
# directory structure. We save the state_dict instead.
logging.info("saving the model's state dictionary")
torch.save(
new_model.state_dict(), "bertabs-finetuned-cnndm-extractive-abstractive-summarization-pytorch_model.bin"
new_model.state_dict(), "./bertabs-finetuned-cnndm-extractive-abstractive-summarization/pytorch_model.bin"
)
@@ -34,7 +34,7 @@ from transformers import BertConfig, BertModel, PreTrainedModel
MAX_SIZE = 5000
BERTABS_FINETUNED_MODEL_MAP = {
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization-pytorch_model.bin",
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization/pytorch_model.bin",
}
@@ -844,7 +844,7 @@ class Translator(object):
dec_out, dec_states = self.model.decoder(decoder_input, src_features, dec_states, step=step)
# Generator forward.
log_probs = self.generator.forward(dec_out.transpose(0, 1).squeeze(0))
log_probs = self.generator(dec_out.transpose(0, 1).squeeze(0))
vocab_size = log_probs.size(-1)
if step < min_length:
+25
View File
@@ -0,0 +1,25 @@
***This script evaluates the the multitask pre-trained checkpoint for ``t5-base`` (see paper [here](https://arxiv.org/pdf/1910.10683.pdf)) on the CNN/Daily Mail test dataset. Please note that the results in the paper were attained using a model fine-tuned on summarization, so that results will be worse here by approx. 0.5 ROUGE points***
### Get the CNN Data
First, you need to download the CNN data. It's about ~400 MB and can be downloaded by
running
```bash
python download_cnn_daily_mail.py cnn_articles_input_data.txt cnn_articles_reference_summaries.txt
```
You should confirm that each file has 11490 lines:
```bash
wc -l cnn_articles_input_data.txt # should print 11490
wc -l cnn_articles_reference_summaries.txt # should print 11490
```
### Usage
To create summaries for each article in dataset, run:
```bash
python evaluate_cnn.py cnn_articles_input_data.txt cnn_generated_articles_summaries.txt cnn_articles_reference_summaries.txt rouge_score.txt
```
The default batch size, 8, fits in 16GB GPU memory, but may need to be adjusted to fit your system.
The rouge scores "rouge1, rouge2, rougeL" are automatically created and saved in ``rouge_score.txt``.
@@ -0,0 +1,31 @@
import argparse
from pathlib import Path
import tensorflow_datasets as tfds
def main(input_path, reference_path, data_dir):
cnn_ds = tfds.load("cnn_dailymail", split="test", shuffle_files=False, data_dir=data_dir)
cnn_ds_iter = tfds.as_numpy(cnn_ds)
test_articles_file = Path(input_path).open("w")
test_summaries_file = Path(reference_path).open("w")
for example in cnn_ds_iter:
test_articles_file.write(example["article"].decode("utf-8") + "\n")
test_articles_file.flush()
test_summaries_file.write(example["highlights"].decode("utf-8").replace("\n", " ") + "\n")
test_summaries_file.flush()
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("input_path", type=str, help="where to save the articles input data")
parser.add_argument(
"reference_path", type=str, help="where to save the reference summaries",
)
parser.add_argument(
"--data_dir", type=str, default="~/tensorflow_datasets", help="where to save the tensorflow datasets.",
)
args = parser.parse_args()
main(args.input_path, args.reference_path, args.data_dir)
+101
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@@ -0,0 +1,101 @@
import argparse
from pathlib import Path
import torch
from tqdm import tqdm
from rouge_score import rouge_scorer, scoring
from transformers import T5ForConditionalGeneration, T5Tokenizer
def chunks(lst, n):
"""Yield successive n-sized chunks from lst."""
for i in range(0, len(lst), n):
yield lst[i : i + n]
def generate_summaries(lns, output_file_path, model_size, batch_size, device):
output_file = Path(output_file_path).open("w")
model = T5ForConditionalGeneration.from_pretrained(model_size)
model.to(device)
tokenizer = T5Tokenizer.from_pretrained(model_size)
# update config with summarization specific params
task_specific_params = model.config.task_specific_params
if task_specific_params is not None:
model.config.update(task_specific_params.get("summarization", {}))
for batch in tqdm(list(chunks(lns, batch_size))):
batch = [model.config.prefix + text for text in batch]
dct = tokenizer.batch_encode_plus(batch, max_length=512, return_tensors="pt", pad_to_max_length=True)
input_ids = dct["input_ids"].to(device)
attention_mask = dct["attention_mask"].to(device)
summaries = model.generate(input_ids=input_ids, attention_mask=attention_mask)
dec = [tokenizer.decode(g, skip_special_tokens=True, clean_up_tokenization_spaces=False) for g in summaries]
for hypothesis in dec:
output_file.write(hypothesis + "\n")
output_file.flush()
def calculate_rouge(output_lns, reference_lns, score_path):
score_file = Path(score_path).open("w")
scorer = rouge_scorer.RougeScorer(["rouge1", "rouge2", "rougeL"], use_stemmer=True)
aggregator = scoring.BootstrapAggregator()
for reference_ln, output_ln in zip(reference_lns, output_lns):
scores = scorer.score(reference_ln, output_ln)
aggregator.add_scores(scores)
result = aggregator.aggregate()
score_file.write(
"ROUGE_1: \n{} \n\n ROUGE_2: \n{} \n\n ROUGE_L: \n{} \n\n".format(
result["rouge1"], result["rouge2"], result["rougeL"]
)
)
def run_generate():
parser = argparse.ArgumentParser()
parser.add_argument(
"model_size",
type=str,
help="T5 model size, either 't5-small', 't5-base' or 't5-large'. Defaults to base.",
default="t5-base",
)
parser.add_argument(
"input_path", type=str, help="like cnn_dm/test_articles_input.txt",
)
parser.add_argument(
"output_path", type=str, help="where to save summaries",
)
parser.add_argument("reference_path", type=str, help="like cnn_dm/test_reference_summaries.txt")
parser.add_argument(
"score_path", type=str, help="where to save the rouge score",
)
parser.add_argument(
"--batch_size", type=int, default=8, required=False, help="batch size: how many to summarize at a time",
)
parser.add_argument(
"--no_cuda", default=False, type=bool, help="Whether to force the execution on CPU.",
)
args = parser.parse_args()
args.device = torch.device("cuda" if torch.cuda.is_available() and not args.no_cuda else "cpu")
source_lns = [x.rstrip() for x in open(args.input_path).readlines()]
generate_summaries(source_lns, args.output_path, args.model_size, args.batch_size, args.device)
output_lns = [x.rstrip() for x in open(args.output_path).readlines()]
reference_lns = [x.rstrip() for x in open(args.reference_path).readlines()]
calculate_rouge(output_lns, reference_lns, args.score_path)
if __name__ == "__main__":
run_generate()
@@ -0,0 +1,35 @@
import logging
import os
import sys
import tempfile
import unittest
from pathlib import Path
from unittest.mock import patch
from .evaluate_cnn import run_generate
output_file_name = "output_t5_sum.txt"
score_file_name = "score_t5_sum.txt"
articles = ["New York (CNN)When Liana Barrientos was 23 years old, she got married in Westchester County."]
logging.basicConfig(level=logging.DEBUG)
logger = logging.getLogger()
class TestT5Examples(unittest.TestCase):
def test_t5_cli(self):
stream_handler = logging.StreamHandler(sys.stdout)
logger.addHandler(stream_handler)
tmp = Path(tempfile.gettempdir()) / "utest_generations_t5_sum.hypo"
with tmp.open("w") as f:
f.write("\n".join(articles))
testargs = ["evaluate_cnn.py", "t5-small", str(tmp), output_file_name, str(tmp), score_file_name]
with patch.object(sys, "argv", testargs):
run_generate()
self.assertTrue(Path(output_file_name).exists())
self.assertTrue(Path(score_file_name).exists())
os.remove(Path(output_file_name))
os.remove(Path(score_file_name))
@@ -7,43 +7,34 @@ import pytorch_lightning as pl
import torch
from transformers import (
ALL_PRETRAINED_MODEL_ARCHIVE_MAP,
AdamW,
BertConfig,
BertForTokenClassification,
BertTokenizer,
CamembertConfig,
CamembertForTokenClassification,
CamembertTokenizer,
DistilBertConfig,
DistilBertForTokenClassification,
DistilBertTokenizer,
RobertaConfig,
RobertaForTokenClassification,
RobertaTokenizer,
XLMRobertaConfig,
XLMRobertaForTokenClassification,
XLMRobertaTokenizer,
AutoConfig,
AutoModel,
AutoModelForPreTraining,
AutoModelForQuestionAnswering,
AutoModelForSequenceClassification,
AutoModelForTokenClassification,
AutoModelWithLMHead,
AutoTokenizer,
get_linear_schedule_with_warmup,
)
from transformers.modeling_auto import MODEL_MAPPING
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (BertConfig, RobertaConfig, DistilBertConfig, CamembertConfig, XLMRobertaConfig)
),
(),
)
ALL_MODELS = tuple(ALL_PRETRAINED_MODEL_ARCHIVE_MAP)
MODEL_CLASSES = tuple(m.model_type for m in MODEL_MAPPING)
MODEL_CLASSES = {
"bert": (BertConfig, BertForTokenClassification, BertTokenizer),
"roberta": (RobertaConfig, RobertaForTokenClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForTokenClassification, DistilBertTokenizer),
"camembert": (CamembertConfig, CamembertForTokenClassification, CamembertTokenizer),
"xlmroberta": (XLMRobertaConfig, XLMRobertaForTokenClassification, XLMRobertaTokenizer),
MODEL_MODES = {
"base": AutoModel,
"sequence-classification": AutoModelForSequenceClassification,
"question-answering": AutoModelForQuestionAnswering,
"pretraining": AutoModelForPreTraining,
"token-classification": AutoModelForTokenClassification,
"language-modeling": AutoModelWithLMHead,
}
@@ -56,25 +47,23 @@ def set_seed(args):
class BaseTransformer(pl.LightningModule):
def __init__(self, hparams, num_labels=None):
def __init__(self, hparams, num_labels=None, mode="base"):
"Initialize a model."
super(BaseTransformer, self).__init__()
self.hparams = hparams
self.hparams.model_type = self.hparams.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[self.hparams.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
self.hparams.config_name if self.hparams.config_name else self.hparams.model_name_or_path,
num_labels=num_labels,
**({"num_labels": num_labels} if num_labels is not None else {}),
cache_dir=self.hparams.cache_dir if self.hparams.cache_dir else None,
)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
self.hparams.tokenizer_name if self.hparams.tokenizer_name else self.hparams.model_name_or_path,
do_lower_case=self.hparams.do_lower_case,
cache_dir=self.hparams.cache_dir if self.hparams.cache_dir else None,
)
model = model_class.from_pretrained(
model = MODEL_MODES[mode].from_pretrained(
self.hparams.model_name_or_path,
from_tf=bool(".ckpt" in self.hparams.model_name_or_path),
config=config,
@@ -144,6 +133,16 @@ class BaseTransformer(pl.LightningModule):
def test_dataloader(self):
return self.load_dataset("test", self.hparams.eval_batch_size)
def _feature_file(self, mode):
return os.path.join(
self.hparams.data_dir,
"cached_{}_{}_{}".format(
mode,
list(filter(None, self.hparams.model_name_or_path.split("/"))).pop(),
str(self.hparams.max_seq_length),
),
)
@staticmethod
def add_model_specific_args(parser, root_dir):
parser.add_argument(
@@ -151,7 +150,7 @@ class BaseTransformer(pl.LightningModule):
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES),
)
parser.add_argument(
"--model_name_or_path",
@@ -190,6 +189,31 @@ class BaseTransformer(pl.LightningModule):
parser.add_argument("--eval_batch_size", default=32, type=int)
class LoggingCallback(pl.Callback):
def on_validation_end(self, trainer, pl_module):
logger.info("***** Validation results *****")
if pl_module.is_logger():
metrics = trainer.callback_metrics
# Log results
for key in sorted(metrics):
if key not in ["log", "progress_bar"]:
logger.info("{} = {}\n".format(key, str(metrics[key])))
def on_test_end(self, trainer, pl_module):
logger.info("***** Test results *****")
if pl_module.is_logger():
metrics = trainer.callback_metrics
# Log and save results to file
output_test_results_file = os.path.join(pl_module.hparams.output_dir, "test_results.txt")
with open(output_test_results_file, "w") as writer:
for key in sorted(metrics):
if key not in ["log", "progress_bar"]:
logger.info("{} = {}\n".format(key, str(metrics[key])))
writer.write("{} = {}\n".format(key, str(metrics[key])))
def add_generic_args(parser, root_dir):
parser.add_argument(
"--output_dir",
@@ -257,6 +281,7 @@ def generic_train(model, args):
early_stop_callback=False,
gradient_clip_val=args.max_grad_norm,
checkpoint_callback=checkpoint_callback,
callbacks=[LoggingCallback()],
)
if args.fp16:
+51
View File
@@ -0,0 +1,51 @@
***This script evaluates the multitask pre-trained checkpoint for ``t5-base`` (see paper [here](https://arxiv.org/pdf/1910.10683.pdf)) on the English to German WMT dataset. Please note that the results in the paper were attained using a model fine-tuned on translation, so that results will be worse here by approx. 1.5 BLEU points***
### Intro
This example shows how T5 (here the official [paper](https://arxiv.org/abs/1910.10683)) can be
evaluated on the WMT English-German dataset.
### Get the WMT Data
To be able to reproduce the authors' results on WMT English to German, you first need to download
the WMT14 en-de news datasets.
Go on Stanford's official NLP [website](https://nlp.stanford.edu/projects/nmt/) and find "newstest2013.en" and "newstest2013.de" under WMT'14 English-German data or download the dataset directly via:
```bash
curl https://nlp.stanford.edu/projects/nmt/data/wmt14.en-de/newstest2013.en > newstest2013.en
curl https://nlp.stanford.edu/projects/nmt/data/wmt14.en-de/newstest2013.de > newstest2013.de
```
You should have 3000 sentence in each file. You can verify this by running:
```bash
wc -l newstest2013.en # should give 3000
```
### Usage
Let's check the longest and shortest sentence in our file to find reasonable decoding hyperparameters:
Get the longest and shortest sentence:
```bash
awk '{print NF}' newstest2013.en | sort -n | head -1 # shortest sentence has 1 word
awk '{print NF}' newstest2013.en | sort -n | tail -1 # longest sentence has 106 words
```
We will set our `max_length` to ~3 times the longest sentence and leave `min_length` to its default value of 0.
We decode with beam search `num_beams=4` as proposed in the paper. Also as is common in beam search we set `early_stopping=True` and `length_penalty=2.0`.
To create translation for each in dataset and get a final BLEU score, run:
```bash
python evaluate_wmt.py <path_to_newstest2013.en> newstest2013_de_translations.txt <path_to_newstest2013.de> newsstest2013_en_de_bleu.txt
```
the default batch size, 16, fits in 16GB GPU memory, but may need to be adjusted to fit your system.
### Where is the code?
The core model is in `src/transformers/modeling_t5.py`. This directory only contains examples.
### BLEU Scores
The BLEU score is calculated using [sacrebleu](https://github.com/mjpost/sacreBLEU) by mjpost.
To get the BLEU score we used
View File
+90
View File
@@ -0,0 +1,90 @@
import argparse
from pathlib import Path
import torch
from tqdm import tqdm
from sacrebleu import corpus_bleu
from transformers import T5ForConditionalGeneration, T5Tokenizer
def chunks(lst, n):
"""Yield successive n-sized chunks from lst."""
for i in range(0, len(lst), n):
yield lst[i : i + n]
def generate_translations(lns, output_file_path, batch_size, device):
output_file = Path(output_file_path).open("w")
model = T5ForConditionalGeneration.from_pretrained("t5-base")
model.to(device)
tokenizer = T5Tokenizer.from_pretrained("t5-base")
# update config with summarization specific params
task_specific_params = model.config.task_specific_params
if task_specific_params is not None:
model.config.update(task_specific_params.get("translation_en_to_de", {}))
for batch in tqdm(list(chunks(lns, batch_size))):
batch = [model.config.prefix + text for text in batch]
dct = tokenizer.batch_encode_plus(batch, max_length=512, return_tensors="pt", pad_to_max_length=True)
input_ids = dct["input_ids"].to(device)
attention_mask = dct["attention_mask"].to(device)
translations = model.generate(input_ids=input_ids, attention_mask=attention_mask)
dec = [tokenizer.decode(g, skip_special_tokens=True, clean_up_tokenization_spaces=False) for g in translations]
for hypothesis in dec:
output_file.write(hypothesis + "\n")
output_file.flush()
def calculate_bleu_score(output_lns, refs_lns, score_path):
bleu = corpus_bleu(output_lns, [refs_lns])
result = "BLEU score: {}".format(bleu.score)
score_file = Path(score_path).open("w")
score_file.write(result)
def run_generate():
parser = argparse.ArgumentParser()
parser.add_argument(
"input_path", type=str, help="like wmt/newstest2013.en",
)
parser.add_argument(
"output_path", type=str, help="where to save translation",
)
parser.add_argument(
"reference_path", type=str, help="like wmt/newstest2013.de",
)
parser.add_argument(
"score_path", type=str, help="where to save the bleu score",
)
parser.add_argument(
"--batch_size", type=int, default=16, required=False, help="batch size: how many to summarize at a time",
)
parser.add_argument(
"--no_cuda", default=False, type=bool, help="Whether to force the execution on CPU.",
)
args = parser.parse_args()
args.device = torch.device("cuda" if torch.cuda.is_available() and not args.no_cuda else "cpu")
dash_pattern = (" ##AT##-##AT## ", "-")
input_lns = [x.strip().replace(dash_pattern[0], dash_pattern[1]) for x in open(args.input_path).readlines()]
generate_translations(input_lns, args.output_path, args.batch_size, args.device)
output_lns = [x.strip() for x in open(args.output_path).readlines()]
refs_lns = [x.strip().replace(dash_pattern[0], dash_pattern[1]) for x in open(args.reference_path).readlines()]
calculate_bleu_score(output_lns, refs_lns, args.score_path)
if __name__ == "__main__":
run_generate()
@@ -0,0 +1,43 @@
import logging
import os
import sys
import tempfile
import unittest
from pathlib import Path
from unittest.mock import patch
from .evaluate_wmt import run_generate
text = ["When Liana Barrientos was 23 years old, she got married in Westchester County."]
translation = ["Als Liana Barrientos 23 Jahre alt war, heiratete sie in Westchester County."]
output_file_name = "output_t5_trans.txt"
score_file_name = "score_t5_trans.txt"
logging.basicConfig(level=logging.DEBUG)
logger = logging.getLogger()
class TestT5Examples(unittest.TestCase):
def test_t5_cli(self):
stream_handler = logging.StreamHandler(sys.stdout)
logger.addHandler(stream_handler)
tmp_source = Path(tempfile.gettempdir()) / "utest_generations_t5_trans.hypo"
with tmp_source.open("w") as f:
f.write("\n".join(text))
tmp_target = Path(tempfile.gettempdir()) / "utest_generations_t5_trans.target"
with tmp_target.open("w") as f:
f.write("\n".join(translation))
testargs = ["evaluate_wmt.py", str(tmp_source), output_file_name, str(tmp_target), score_file_name]
with patch.object(sys, "argv", testargs):
run_generate()
self.assertTrue(Path(output_file_name).exists())
self.assertTrue(Path(score_file_name).exists())
os.remove(Path(output_file_name))
os.remove(Path(score_file_name))
+3 -1
View File
@@ -320,7 +320,9 @@ def convert_examples_to_features(
else:
text_b = example.question + " " + ending
inputs = tokenizer.encode_plus(text_a, text_b, add_special_tokens=True, max_length=max_length,)
inputs = tokenizer.encode_plus(
text_a, text_b, add_special_tokens=True, max_length=max_length, return_token_type_ids=True
)
if "num_truncated_tokens" in inputs and inputs["num_truncated_tokens"] > 0:
logger.info(
"Attention! you are cropping tokens (swag task is ok). "
@@ -0,0 +1,84 @@
---
language: finnish
---
## Quickstart
**Release 1.0** (November 25, 2019)
Download the models here:
* Cased Finnish BERT Base: [bert-base-finnish-cased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased-v1.zip)
* Uncased Finnish BERT Base: [bert-base-finnish-uncased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased-v1.zip)
We generally recommend the use of the cased model.
Paper presenting Finnish BERT: [arXiv:1912.07076](https://arxiv.org/abs/1912.07076)
## What's this?
A version of Google's [BERT](https://github.com/google-research/bert) deep transfer learning model for Finnish. The model can be fine-tuned to achieve state-of-the-art results for various Finnish natural language processing tasks.
FinBERT features a custom 50,000 wordpiece vocabulary that has much better coverage of Finnish words than e.g. the previously released [multilingual BERT](https://github.com/google-research/bert/blob/master/multilingual.md) models from Google:
| Vocabulary | Example |
|------------|---------|
| FinBERT | Suomessa vaihtuu kesän aikana sekä pääministeri että valtiovarain ##ministeri . |
| Multilingual BERT | Suomessa vai ##htuu kes ##än aikana sekä p ##ää ##minister ##i että valt ##io ##vara ##in ##minister ##i . |
FinBERT has been pre-trained for 1 million steps on over 3 billion tokens (24B characters) of Finnish text drawn from news, online discussion, and internet crawls. By contrast, Multilingual BERT was trained on Wikipedia texts, where the Finnish Wikipedia text is approximately 3% of the amount used to train FinBERT.
These features allow FinBERT to outperform not only Multilingual BERT but also all previously proposed models when fine-tuned for Finnish natural language processing tasks.
## Results
### Document classification
![learning curves for Yle and Ylilauta document classification](https://raw.githubusercontent.com/TurkuNLP/FinBERT/master/img/yle-ylilauta-curves.png)
FinBERT outperforms multilingual BERT (M-BERT) on document classification over a range of training set sizes on the Yle news (left) and Ylilauta online discussion (right) corpora. (Baseline classification performance with [FastText](https://fasttext.cc/) included for reference.)
[[code](https://github.com/spyysalo/finbert-text-classification)][[Yle data](https://github.com/spyysalo/yle-corpus)] [[Ylilauta data](https://github.com/spyysalo/ylilauta-corpus)]
### Named Entity Recognition
Evaluation on FiNER corpus ([Ruokolainen et al 2019](https://arxiv.org/abs/1908.04212))
| Model | Accuracy |
|--------------------|----------|
| **FinBERT** | **92.40%** |
| Multilingual BERT | 90.29% |
| [FiNER-tagger](https://github.com/Traubert/FiNer-rules) (rule-based) | 86.82% |
(FiNER tagger results from [Ruokolainen et al. 2019](https://arxiv.org/pdf/1908.04212.pdf))
[[code](https://github.com/jouniluoma/keras-bert-ner)][[data](https://github.com/mpsilfve/finer-data)]
### Part of speech tagging
Evaluation on three Finnish corpora annotated with [Universal Dependencies](https://universaldependencies.org/) part-of-speech tags: the Turku Dependency Treebank (TDT), FinnTreeBank (FTB), and Parallel UD treebank (PUD)
| Model | TDT | FTB | PUD |
|-------------------|-------------|-------------|-------------|
| **FinBERT** | **98.23%** | **98.39%** | **98.08%** |
| Multilingual BERT | 96.97% | 95.87% | 97.58% |
[[code](https://github.com/spyysalo/bert-pos)][[data](http://hdl.handle.net/11234/1-2837)]
## Use with PyTorch
If you want to use the model with the huggingface/transformers library, follow the steps in [huggingface_transformers.md](https://github.com/TurkuNLP/FinBERT/blob/master/huggingface_transformers.md)
## Previous releases
### Release 0.2
**October 24, 2019** Beta version of the BERT base uncased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-uncased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased.zip)
### Release 0.1
**September 30, 2019** We release a beta version of the BERT base cased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-cased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased.zip)
@@ -0,0 +1,84 @@
---
language: finnish
---
## Quickstart
**Release 1.0** (November 25, 2019)
Download the models here:
* Cased Finnish BERT Base: [bert-base-finnish-cased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased-v1.zip)
* Uncased Finnish BERT Base: [bert-base-finnish-uncased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased-v1.zip)
We generally recommend the use of the cased model.
Paper presenting Finnish BERT: [arXiv:1912.07076](https://arxiv.org/abs/1912.07076)
## What's this?
A version of Google's [BERT](https://github.com/google-research/bert) deep transfer learning model for Finnish. The model can be fine-tuned to achieve state-of-the-art results for various Finnish natural language processing tasks.
FinBERT features a custom 50,000 wordpiece vocabulary that has much better coverage of Finnish words than e.g. the previously released [multilingual BERT](https://github.com/google-research/bert/blob/master/multilingual.md) models from Google:
| Vocabulary | Example |
|------------|---------|
| FinBERT | Suomessa vaihtuu kesän aikana sekä pääministeri että valtiovarain ##ministeri . |
| Multilingual BERT | Suomessa vai ##htuu kes ##än aikana sekä p ##ää ##minister ##i että valt ##io ##vara ##in ##minister ##i . |
FinBERT has been pre-trained for 1 million steps on over 3 billion tokens (24B characters) of Finnish text drawn from news, online discussion, and internet crawls. By contrast, Multilingual BERT was trained on Wikipedia texts, where the Finnish Wikipedia text is approximately 3% of the amount used to train FinBERT.
These features allow FinBERT to outperform not only Multilingual BERT but also all previously proposed models when fine-tuned for Finnish natural language processing tasks.
## Results
### Document classification
![learning curves for Yle and Ylilauta document classification](https://raw.githubusercontent.com/TurkuNLP/FinBERT/master/img/yle-ylilauta-curves.png)
FinBERT outperforms multilingual BERT (M-BERT) on document classification over a range of training set sizes on the Yle news (left) and Ylilauta online discussion (right) corpora. (Baseline classification performance with [FastText](https://fasttext.cc/) included for reference.)
[[code](https://github.com/spyysalo/finbert-text-classification)][[Yle data](https://github.com/spyysalo/yle-corpus)] [[Ylilauta data](https://github.com/spyysalo/ylilauta-corpus)]
### Named Entity Recognition
Evaluation on FiNER corpus ([Ruokolainen et al 2019](https://arxiv.org/abs/1908.04212))
| Model | Accuracy |
|--------------------|----------|
| **FinBERT** | **92.40%** |
| Multilingual BERT | 90.29% |
| [FiNER-tagger](https://github.com/Traubert/FiNer-rules) (rule-based) | 86.82% |
(FiNER tagger results from [Ruokolainen et al. 2019](https://arxiv.org/pdf/1908.04212.pdf))
[[code](https://github.com/jouniluoma/keras-bert-ner)][[data](https://github.com/mpsilfve/finer-data)]
### Part of speech tagging
Evaluation on three Finnish corpora annotated with [Universal Dependencies](https://universaldependencies.org/) part-of-speech tags: the Turku Dependency Treebank (TDT), FinnTreeBank (FTB), and Parallel UD treebank (PUD)
| Model | TDT | FTB | PUD |
|-------------------|-------------|-------------|-------------|
| **FinBERT** | **98.23%** | **98.39%** | **98.08%** |
| Multilingual BERT | 96.97% | 95.87% | 97.58% |
[[code](https://github.com/spyysalo/bert-pos)][[data](http://hdl.handle.net/11234/1-2837)]
## Use with PyTorch
If you want to use the model with the huggingface/transformers library, follow the steps in [huggingface_transformers.md](https://github.com/TurkuNLP/FinBERT/blob/master/huggingface_transformers.md)
## Previous releases
### Release 0.2
**October 24, 2019** Beta version of the BERT base uncased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-uncased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased.zip)
### Release 0.1
**September 30, 2019** We release a beta version of the BERT base cased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-cased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased.zip)
@@ -0,0 +1,26 @@
# SciBERT
This is the pretrained model presented in [SciBERT: A Pretrained Language Model for Scientific Text](https://www.aclweb.org/anthology/D19-1371/), which is a BERT model trained on scientific text.
The training corpus was papers taken from [Semantic Scholar](https://www.semanticscholar.org). Corpus size is 1.14M papers, 3.1B tokens. We use the full text of the papers in training, not just abstracts.
SciBERT has its own wordpiece vocabulary (scivocab) that's built to best match the training corpus. We trained cased and uncased versions.
Available models include:
* `scibert_scivocab_cased`
* `scibert_scivocab_uncased`
The original repo can be found [here](https://github.com/allenai/scibert).
If using these models, please cite the following paper:
```
@inproceedings{beltagy-etal-2019-scibert,
title = "SciBERT: A Pretrained Language Model for Scientific Text",
author = "Beltagy, Iz and Lo, Kyle and Cohan, Arman",
booktitle = "EMNLP",
year = "2019",
publisher = "Association for Computational Linguistics",
url = "https://www.aclweb.org/anthology/D19-1371"
}
```
@@ -0,0 +1,26 @@
# SciBERT
This is the pretrained model presented in [SciBERT: A Pretrained Language Model for Scientific Text](https://www.aclweb.org/anthology/D19-1371/), which is a BERT model trained on scientific text.
The training corpus was papers taken from [Semantic Scholar](https://www.semanticscholar.org). Corpus size is 1.14M papers, 3.1B tokens. We use the full text of the papers in training, not just abstracts.
SciBERT has its own wordpiece vocabulary (scivocab) that's built to best match the training corpus. We trained cased and uncased versions.
Available models include:
* `scibert_scivocab_cased`
* `scibert_scivocab_uncased`
The original repo can be found [here](https://github.com/allenai/scibert).
If using these models, please cite the following paper:
```
@inproceedings{beltagy-etal-2019-scibert,
title = "SciBERT: A Pretrained Language Model for Scientific Text",
author = "Beltagy, Iz and Lo, Kyle and Cohan, Arman",
booktitle = "EMNLP",
year = "2019",
publisher = "Association for Computational Linguistics",
url = "https://www.aclweb.org/anthology/D19-1371"
}
```
+9
View File
@@ -0,0 +1,9 @@
# CamemBERT
CamemBERT is a state-of-the-art language model for French based on the RoBERTa architecture pretrained on the French subcorpus of the newly available multilingual corpus OSCAR.
CamemBERT was originally evaluated on four different downstream tasks for French: part-of-speech (POS) tagging, dependency parsing, named entity recognition (NER) and natural language inference (NLI); improving the state of the art for most tasks over previous monolingual and multilingual approaches, which confirms the effectiveness of large pretrained language models for French.
CamemBERT was trained and evaluated by Louis Martin, Benjamin Muller, Pedro Javier Ortiz Suárez, Yoann Dupont, Laurent Romary, Éric Villemonte de la Clergerie, Djamé Seddah and Benoît Sagot.
Preprint can be found [CamemBERT: a Tasty French Language Model](https://arxiv.org/abs/1911.03894)
@@ -0,0 +1,31 @@
## albert_chinese_small
### Overview
**Language model:** albert-small
**Model size:** 18.5M
**Language:** Chinese
**Training data:** [CLUECorpusSmall](https://github.com/CLUEbenchmark/CLUECorpus2020)
**Eval data:** [CLUE dataset](https://github.com/CLUEbenchmark/CLUE)
### Results
For results on downstream tasks like text classification, please refer to [this repository](https://github.com/CLUEbenchmark/CLUE).
### Usage
**NOTE:**Since sentencepiece is not used in `albert_chinese_small` model, you have to call **BertTokenizer** instead of AlbertTokenizer !!!
```
import torch
from transformers import BertTokenizer, AlbertModel
tokenizer = BertTokenizer.from_pretrained("clue/albert_chinese_small")
albert = AlbertModel.from_pretrained("clue/albert_chinese_small")
```
### About CLUE benchmark
Organization of Language Understanding Evaluation benchmark for Chinese: tasks & datasets, baselines, pre-trained Chinese models, corpus and leaderboard.
Github: https://github.com/CLUEbenchmark
Website: https://www.cluebenchmarks.com/
@@ -0,0 +1,31 @@
## albert_chinese_tiny
### Overview
**Language model:** albert-tiny
**Model size:** 16M
**Language:** Chinese
**Training data:** [CLUECorpusSmall](https://github.com/CLUEbenchmark/CLUECorpus2020)
**Eval data:** [CLUE dataset](https://github.com/CLUEbenchmark/CLUE)
### Results
For results on downstream tasks like text classification, please refer to [this repository](https://github.com/CLUEbenchmark/CLUE).
### Usage
**NOTE:**Since sentencepiece is not used in `albert_chinese_tiny` model, you have to call **BertTokenizer** instead of AlbertTokenizer !!!
```
import torch
from transformers import BertTokenizer, AlbertModel
tokenizer = BertTokenizer.from_pretrained("clue/albert_chinese_tiny")
albert = AlbertModel.from_pretrained("clue/albert_chinese_tiny")
```
### About CLUE benchmark
Organization of Language Understanding Evaluation benchmark for Chinese: tasks & datasets, baselines, pre-trained Chinese models, corpus and leaderboard.
Github: https://github.com/CLUEbenchmark
Website: https://www.cluebenchmarks.com/
@@ -0,0 +1,39 @@
# Introduction
This model was trained on TPU and the details are as follows:
## Model
##
| Model_name | params | size | Training_corpus | Vocab |
| :------------------------------------------ | :----- | :------- | :----------------- | :-----------: |
| **`RoBERTa-tiny-clue`** <br/>Super_small_model | 7.5M | 28.3M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-tiny-pair`** <br/>Super_small_sentence_pair_model | 7.5M | 28.3M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-tiny3L768-clue`** <br/>small_model | 38M | 110M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-tiny3L312-clue`** <br/>small_model | <7.5M | 24M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-large-clue`** <br/> Large_model | 290M | 1.20G | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-large-pair`** <br/>Large_sentence_pair_model | 290M | 1.20G | **CLUECorpus2020** | **CLUEVocab** |
### Usage
With the help of[Huggingface-Transformers 2.5.1](https://github.com/huggingface/transformers), you could use these model as follows
```
tokenizer = BertTokenizer.from_pretrained("MODEL_NAME")
model = BertModel.from_pretrained("MODEL_NAME")
```
`MODEL_NAME`:
| Model_NAME | MODEL_LINK |
| -------------------------- | ------------------------------------------------------------ |
| **RoBERTa-tiny-clue** | [`clue/roberta_chinese_clue_tiny`](https://huggingface.co/clue/roberta_chinese_clue_tiny) |
| **RoBERTa-tiny-pair** | [`clue/roberta_chinese_pair_tiny`](https://huggingface.co/clue/roberta_chinese_pair_tiny) |
| **RoBERTa-tiny3L768-clue** | [`clue/roberta_chinese_3L768_clue_tiny`](https://huggingface.co/clue/roberta_chinese_3L768_clue_tiny) |
| **RoBERTa-tiny3L312-clue** | [`clue/roberta_chinese_3L312_clue_tiny`](https://huggingface.co/clue/roberta_chinese_3L312_clue_tiny) |
| **RoBERTa-large-clue** | [`clue/roberta_chinese_clue_large`](https://huggingface.co/clue/roberta_chinese_clue_large) |
| **RoBERTa-large-pair** | [`clue/roberta_chinese_pair_large`](https://huggingface.co/clue/roberta_chinese_pair_large) |
## Details
Please read <a href='https://arxiv.org/pdf/2003.01355'>https://arxiv.org/pdf/2003.01355.
Please visit our repository: https://github.com/CLUEbenchmark/CLUEPretrainedModels.git
@@ -0,0 +1,31 @@
## roberta_chinese_base
### Overview
**Language model:** roberta-base
**Model size:** 392M
**Language:** Chinese
**Training data:** [CLUECorpusSmall](https://github.com/CLUEbenchmark/CLUECorpus2020)
**Eval data:** [CLUE dataset](https://github.com/CLUEbenchmark/CLUE)
### Results
For results on downstream tasks like text classification, please refer to [this repository](https://github.com/CLUEbenchmark/CLUE).
### Usage
**NOTE:** You have to call **BertTokenizer** instead of RobertaTokenizer !!!
```
import torch
from transformers import BertTokenizer, BertModel
tokenizer = BertTokenizer.from_pretrained("clue/roberta_chinese_base")
roberta = BertModel.from_pretrained("clue/roberta_chinese_base")
```
### About CLUE benchmark
Organization of Language Understanding Evaluation benchmark for Chinese: tasks & datasets, baselines, pre-trained Chinese models, corpus and leaderboard.
Github: https://github.com/CLUEbenchmark
Website: https://www.cluebenchmarks.com/
@@ -1,5 +1,6 @@
---
language: german
license: mit
---
# 🤗 + 📚 dbmdz German BERT models
@@ -1,5 +1,6 @@
---
language: german
license: mit
tags:
- "historic german"
---
@@ -1,5 +1,6 @@
---
language: german
license: mit
tags:
- "historic german"
---
@@ -1,5 +1,6 @@
---
language: german
license: mit
---
# 🤗 + 📚 dbmdz German BERT models
@@ -1,5 +1,6 @@
---
language: italian
license: mit
---
# 🤗 + 📚 dbmdz BERT models
@@ -1,5 +1,6 @@
---
language: italian
license: mit
---
# 🤗 + 📚 dbmdz BERT models
@@ -1,5 +1,6 @@
---
language: italian
license: mit
---
# 🤗 + 📚 dbmdz BERT models
@@ -1,5 +1,6 @@
---
language: italian
license: mit
---
# 🤗 + 📚 dbmdz BERT models
@@ -0,0 +1,77 @@
---
language: turkish
license: mit
---
# 🤗 + 📚 dbmdz Turkish BERT model
In this repository the MDZ Digital Library team (dbmdz) at the Bavarian State
Library open sources a cased model for Turkish 🎉
# 🇹🇷 BERTurk
BERTurk is a community-driven cased BERT model for Turkish.
Some datasets used for pretraining and evaluation are contributed from the
awesome Turkish NLP community, as well as the decision for the model name: BERTurk.
## Stats
The current version of the model is trained on a filtered and sentence
segmented version of the Turkish [OSCAR corpus](https://traces1.inria.fr/oscar/),
a recent Wikipedia dump, various [OPUS corpora](http://opus.nlpl.eu/) and a
special corpus provided by [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/).
The final training corpus has a size of 35GB and 44,04,976,662 tokens.
Thanks to Google's TensorFlow Research Cloud (TFRC) we could train a cased model
on a TPU v3-8 for 2M steps.
For this model we use a vocab size of 128k.
## Model weights
Currently only PyTorch-[Transformers](https://github.com/huggingface/transformers)
compatible weights are available. If you need access to TensorFlow checkpoints,
please raise an issue!
| Model | Downloads
| ------------------------------------ | ---------------------------------------------------------------------------------------------------------------
| `dbmdz/bert-base-turkish-128k-cased` | [`config.json`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-cased/config.json) • [`pytorch_model.bin`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-cased/pytorch_model.bin) • [`vocab.txt`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-cased/vocab.txt)
## Usage
With Transformers >= 2.3 our BERTurk cased model can be loaded like:
```python
from transformers import AutoModel, AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("dbmdz/bert-base-turkish-128k-cased")
model = AutoModel.from_pretrained("dbmdz/bert-base-turkish-128k-cased")
```
## Results
For results on PoS tagging or NER tasks, please refer to
[this repository](https://github.com/stefan-it/turkish-bert).
# Huggingface model hub
All models are available on the [Huggingface model hub](https://huggingface.co/dbmdz).
# Contact (Bugs, Feedback, Contribution and more)
For questions about our BERT models just open an issue
[here](https://github.com/dbmdz/berts/issues/new) 🤗
# Acknowledgments
Thanks to [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/) for providing us
additional large corpora for Turkish. Many thanks to Reyyan Yeniterzi for providing
us the Turkish NER dataset for evaluation.
Research supported with Cloud TPUs from Google's TensorFlow Research Cloud (TFRC).
Thanks for providing access to the TFRC ❤️
Thanks to the generous support from the [Hugging Face](https://huggingface.co/) team,
it is possible to download both cased and uncased models from their S3 storage 🤗
@@ -0,0 +1,77 @@
---
language: turkish
license: mit
---
# 🤗 + 📚 dbmdz Turkish BERT model
In this repository the MDZ Digital Library team (dbmdz) at the Bavarian State
Library open sources an uncased model for Turkish 🎉
# 🇹🇷 BERTurk
BERTurk is a community-driven uncased BERT model for Turkish.
Some datasets used for pretraining and evaluation are contributed from the
awesome Turkish NLP community, as well as the decision for the model name: BERTurk.
## Stats
The current version of the model is trained on a filtered and sentence
segmented version of the Turkish [OSCAR corpus](https://traces1.inria.fr/oscar/),
a recent Wikipedia dump, various [OPUS corpora](http://opus.nlpl.eu/) and a
special corpus provided by [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/).
The final training corpus has a size of 35GB and 44,04,976,662 tokens.
Thanks to Google's TensorFlow Research Cloud (TFRC) we could train an uncased model
on a TPU v3-8 for 2M steps.
For this model we use a vocab size of 128k.
## Model weights
Currently only PyTorch-[Transformers](https://github.com/huggingface/transformers)
compatible weights are available. If you need access to TensorFlow checkpoints,
please raise an issue!
| Model | Downloads
| -------------------------------------- | ---------------------------------------------------------------------------------------------------------------
| `dbmdz/bert-base-turkish-128k-uncased` | [`config.json`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-uncased/config.json) • [`pytorch_model.bin`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-uncased/pytorch_model.bin) • [`vocab.txt`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-uncased/vocab.txt)
## Usage
With Transformers >= 2.3 our BERTurk uncased model can be loaded like:
```python
from transformers import AutoModel, AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("dbmdz/bert-base-turkish-128k-uncased")
model = AutoModel.from_pretrained("dbmdz/bert-base-turkish-128k-uncased")
```
## Results
For results on PoS tagging or NER tasks, please refer to
[this repository](https://github.com/stefan-it/turkish-bert).
# Huggingface model hub
All models are available on the [Huggingface model hub](https://huggingface.co/dbmdz).
# Contact (Bugs, Feedback, Contribution and more)
For questions about our BERT models just open an issue
[here](https://github.com/dbmdz/berts/issues/new) 🤗
# Acknowledgments
Thanks to [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/) for providing us
additional large corpora for Turkish. Many thanks to Reyyan Yeniterzi for providing
us the Turkish NER dataset for evaluation.
Research supported with Cloud TPUs from Google's TensorFlow Research Cloud (TFRC).
Thanks for providing access to the TFRC ❤️
Thanks to the generous support from the [Hugging Face](https://huggingface.co/) team,
it is possible to download both cased and uncased models from their S3 storage 🤗
@@ -1,5 +1,6 @@
---
language: turkish
license: mit
---
# 🤗 + 📚 dbmdz Turkish BERT model
@@ -0,0 +1,75 @@
---
language: turkish
license: mit
---
# 🤗 + 📚 dbmdz Turkish BERT model
In this repository the MDZ Digital Library team (dbmdz) at the Bavarian State
Library open sources an uncased model for Turkish 🎉
# 🇹🇷 BERTurk
BERTurk is a community-driven uncased BERT model for Turkish.
Some datasets used for pretraining and evaluation are contributed from the
awesome Turkish NLP community, as well as the decision for the model name: BERTurk.
## Stats
The current version of the model is trained on a filtered and sentence
segmented version of the Turkish [OSCAR corpus](https://traces1.inria.fr/oscar/),
a recent Wikipedia dump, various [OPUS corpora](http://opus.nlpl.eu/) and a
special corpus provided by [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/).
The final training corpus has a size of 35GB and 44,04,976,662 tokens.
Thanks to Google's TensorFlow Research Cloud (TFRC) we could train an uncased model
on a TPU v3-8 for 2M steps.
## Model weights
Currently only PyTorch-[Transformers](https://github.com/huggingface/transformers)
compatible weights are available. If you need access to TensorFlow checkpoints,
please raise an issue!
| Model | Downloads
| --------------------------------- | ---------------------------------------------------------------------------------------------------------------
| `dbmdz/bert-base-turkish-uncased` | [`config.json`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-uncased/config.json) • [`pytorch_model.bin`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-uncased/pytorch_model.bin) • [`vocab.txt`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-uncased/vocab.txt)
## Usage
With Transformers >= 2.3 our BERTurk uncased model can be loaded like:
```python
from transformers import AutoModel, AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("dbmdz/bert-base-turkish-uncased")
model = AutoModel.from_pretrained("dbmdz/bert-base-turkish-uncased")
```
## Results
For results on PoS tagging or NER tasks, please refer to
[this repository](https://github.com/stefan-it/turkish-bert).
# Huggingface model hub
All models are available on the [Huggingface model hub](https://huggingface.co/dbmdz).
# Contact (Bugs, Feedback, Contribution and more)
For questions about our BERT models just open an issue
[here](https://github.com/dbmdz/berts/issues/new) 🤗
# Acknowledgments
Thanks to [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/) for providing us
additional large corpora for Turkish. Many thanks to Reyyan Yeniterzi for providing
us the Turkish NER dataset for evaluation.
Research supported with Cloud TPUs from Google's TensorFlow Research Cloud (TFRC).
Thanks for providing access to the TFRC ❤️
Thanks to the generous support from the [Hugging Face](https://huggingface.co/) team,
it is possible to download both cased and uncased models from their S3 storage 🤗
@@ -0,0 +1,77 @@
---
language: turkish
license: mit
---
# 🤗 + 📚 dbmdz Distilled Turkish BERT model
In this repository the MDZ Digital Library team (dbmdz) at the Bavarian State
Library open sources a (cased) distilled model for Turkish 🎉
# 🇹🇷 DistilBERTurk
DistilBERTurk is a community-driven cased distilled BERT model for Turkish.
DistilBERTurk was trained on 7GB of the original training data that was used
for training [BERTurk](https://github.com/stefan-it/turkish-bert/tree/master#stats),
using the cased version of BERTurk as teacher model.
*DistilBERTurk* was trained with the official Hugging Face implementation from
[here](https://github.com/huggingface/transformers/tree/master/examples/distillation)
for 5 days on 4 RTX 2080 TI.
More details about distillation can be found in the
["DistilBERT, a distilled version of BERT: smaller, faster, cheaper and lighter"](https://arxiv.org/abs/1910.01108)
paper by Sanh et al. (2019).
## Model weights
Currently only PyTorch-[Transformers](https://github.com/huggingface/transformers)
compatible weights are available. If you need access to TensorFlow checkpoints,
please raise an issue in the [BERTurk](https://github.com/stefan-it/turkish-bert) repository!
| Model | Downloads
| --------------------------------- | ---------------------------------------------------------------------------------------------------------------
| `dbmdz/distilbert-base-turkish-cased` | [`config.json`](https://cdn.huggingface.co/dbmdz/distilbert-base-turkish-cased/config.json) • [`pytorch_model.bin`](https://cdn.huggingface.co/dbmdz/distilbert-base-turkish-cased/pytorch_model.bin) • [`vocab.txt`](https://cdn.huggingface.co/dbmdz/distilbert-base-turkish-cased/vocab.txt)
## Usage
With Transformers >= 2.3 our DistilBERTurk model can be loaded like:
```python
from transformers import AutoModel, AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("dbmdz/distilbert-base-turkish-cased")
model = AutoModel.from_pretrained("dbmdz/distilbert-base-turkish-cased")
```
## Results
For results on PoS tagging or NER tasks, please refer to
[this repository](https://github.com/stefan-it/turkish-bert).
For PoS tagging, DistilBERTurk outperforms the 24-layer XLM-RoBERTa model.
The overall performance difference between DistilBERTurk and the original
(teacher) BERTurk model is ~1.18%.
# Huggingface model hub
All models are available on the [Huggingface model hub](https://huggingface.co/dbmdz).
# Contact (Bugs, Feedback, Contribution and more)
For questions about our BERT models just open an issue
[here](https://github.com/dbmdz/berts/issues/new) 🤗
# Acknowledgments
Thanks to [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/) for providing us
additional large corpora for Turkish. Many thanks to Reyyan Yeniterzi for providing
us the Turkish NER dataset for evaluation.
Research supported with Cloud TPUs from Google's TensorFlow Research Cloud (TFRC).
Thanks for providing access to the TFRC ❤️
Thanks to the generous support from the [Hugging Face](https://huggingface.co/) team,
it is possible to download both cased and uncased models from their S3 storage 🤗
@@ -0,0 +1 @@
This is an upload of the bert-base-nli-stsb-mean-tokens pretrained model from the Sentence Transformers Repo (https://github.com/UKPLab/sentence-transformers)
@@ -0,0 +1,79 @@
---
language: polish
thumbnail: https://raw.githubusercontent.com/kldarek/polbert/master/img/polbert.png
---
# Polbert - Polish BERT
Polish version of BERT language model is here! While this is still work in progress, I'm happy to share the first model, similar to BERT-Base and trained on a large Polish corpus. If you'd like to contribute to this project, please reach out to me!
![PolBERT image](https://raw.githubusercontent.com/kldarek/polbert/master/img/polbert.png)
## Pre-training corpora
Below is the list of corpora used along with the output of `wc` command (counting lines, words and characters). These corpora were divided into sentences with srxsegmenter (see references), concatenated and tokenized with HuggingFace BERT Tokenizer.
| Tables | Lines | Words | Characters |
| ------------- |--------------:| -----:| -----:|
| [Polish subset of Open Subtitles](http://opus.nlpl.eu/OpenSubtitles-v2018.php) | 236635408| 1431199601 | 7628097730 |
| [Polish subset of ParaCrawl](http://opus.nlpl.eu/ParaCrawl.php) | 8470950 | 176670885 | 1163505275 |
| [Polish Parliamentary Corpus](http://clip.ipipan.waw.pl/PPC) | 9799859 | 121154785 | 938896963 |
| [Polish Wikipedia - Feb 2020](https://dumps.wikimedia.org/plwiki/latest/plwiki-latest-pages-articles.xml.bz2) | 8014206 | 132067986 | 1015849191 |
| Total | 262920423 | 1861093257 | 10746349159 |
## Pre-training details
* Polbert was trained with code provided in Google BERT's github repository (https://github.com/google-research/bert)
* Currently released model follows bert-base-uncased model architecture (12-layer, 768-hidden, 12-heads, 110M parameters)
* Training set-up: in total 1 million training steps:
* 100.000 steps - 128 sequence length, batch size 512, learning rate 1e-4 (10.000 steps warmup)
* 800.000 steps - 128 sequence length, batch size 512, learning rate 5e-5
* 100.000 steps - 512 sequence length, batch size 256, learning rate 2e-5
* The model was trained on a single Google Cloud TPU v3-8
## Usage
Polbert is released via [HuggingFace Transformers library](https://huggingface.co/transformers/).
For an example use as language model, see [this notebook](https://github.com/kldarek/polbert/blob/master/LM_testing.ipynb) file.
```python
from transformers import *
model = BertForMaskedLM.from_pretrained("dkleczek/bert-base-polish-uncased-v1")
tokenizer = BertTokenizer.from_pretrained("dkleczek/bert-base-polish-uncased-v1")
nlp = pipeline('fill-mask', model=model, tokenizer=tokenizer)
for pred in nlp(f"Adam Mickiewicz wielkim polskim {nlp.tokenizer.mask_token} był."):
print(pred)
# Output:
# {'sequence': '[CLS] adam mickiewicz wielkim polskim poeta był. [SEP]', 'score': 0.47196975350379944, 'token': 26596}
# {'sequence': '[CLS] adam mickiewicz wielkim polskim bohaterem był. [SEP]', 'score': 0.09127858281135559, 'token': 10953}
# {'sequence': '[CLS] adam mickiewicz wielkim polskim człowiekiem był. [SEP]', 'score': 0.0647173821926117, 'token': 5182}
# {'sequence': '[CLS] adam mickiewicz wielkim polskim pisarzem był. [SEP]', 'score': 0.05232388526201248, 'token': 24293}
# {'sequence': '[CLS] adam mickiewicz wielkim polskim politykiem był. [SEP]', 'score': 0.04554257541894913, 'token': 44095}
```
See the next section for an example usage of Polbert in downstream tasks.
## Evaluation
I'd love to get some help from the Polish NLP community here! If you feel like evaluating Polbert on some benchmark tasks, it would be great if you can share the results.
So far, I've compared the performance of Polbert vs Multilingual BERT on PolEmo 2.0 sentiment classification, here are the results. These results are are produced with a linear classification layer on top of pooled output, trained for 10 epochs with learning rate 3e-5. The checkpoint with the lowest loss on validation set is evaluated on the test set.
| PolEmo 2.0 Sentiment Classifcation | Test Accuracy |
| ------------- |--------------:|
| Multilingual BERT | 0.78 |
| Polbert | 0.85 |
## Bias
The data used to train the model is biased. It may reflect stereotypes related to gender, ethnicity etc. Please be careful when using the model for downstream task to consider these biases and mitigate them.
## Acknowledgements
I'd like to express my gratitude to Google [TensorFlow Research Cloud (TFRC)](https://www.tensorflow.org/tfrc) for providing the free TPU credits - thank you! Also appreciate the help from Timo Möller from [deepset](https://deepset.ai) for sharing tips and scripts based on their experience training German BERT model. Finally, thanks to Rachel Thomas, Jeremy Howard and Sylvain Gugger from [fastai](https://www.fast.ai) for their NLP and Deep Learning courses!
## Author
Darek Kłeczek - contact me on Twitter [@dk21](https://twitter.com/dk21)
## References
* https://github.com/google-research/bert
* https://github.com/narusemotoki/srx_segmenter
* SRX rules file for sentence splitting in Polish, written by Marcin Miłkowski: https://raw.githubusercontent.com/languagetool-org/languagetool/master/languagetool-core/src/main/resources/org/languagetool/resource/segment.srx
* PolEmo 2.0 Sentiment Analysis Dataset for CoNLL: https://clarin-pl.eu/dspace/handle/11321/710
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 78.94044093451794,
"f1": 81.7724930324639,
"total": 6078,
"HasAns_exact": 76.28865979381443,
"HasAns_f1": 82.20385314478195,
"HasAns_total": 2910,
"NoAns_exact": 81.37626262626263,
"NoAns_f1": 81.37626262626263,
"NoAns_total": 3168,
"best_exact": 78.95689371503784,
"best_exact_thresh": 0.0,
"best_f1": 81.78894581298378,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "albert-base-v2",
"model_type": "albert",
"num_train_epochs": 3,
"per_gpu_train_batch_size": 8,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 8,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 79.2694965449161,
"f1": 82.50844352970152,
"total": 6078,
"HasAns_exact": 74.87972508591065,
"HasAns_f1": 81.64478342732858,
"HasAns_total": 2910,
"NoAns_exact": 83.30176767676768,
"NoAns_f1": 83.30176767676768,
"NoAns_total": 3168,
"best_exact": 79.2694965449161,
"best_exact_thresh": 0.0,
"best_f1": 82.50844352970155,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 1,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "albert-large-v2",
"model_type": "albert",
"num_train_epochs": 5,
"per_gpu_train_batch_size": 8,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 8,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 85.93287265547877,
"f1": 88.91258331187983,
"total": 6078,
"HasAns_exact": 84.36426116838489,
"HasAns_f1": 90.58786301361013,
"HasAns_total": 2910,
"NoAns_exact": 87.37373737373737,
"NoAns_f1": 87.37373737373737,
"NoAns_total": 3168,
"best_exact": 85.93287265547877,
"best_exact_thresh": 0.0,
"best_f1": 88.91258331187993,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 512,
"model_name_or_path": "albert-xxlarge-v1",
"model_type": "albert",
"num_train_epochs": 4,
"per_gpu_train_batch_size": 1,
"save_steps": 1000,
"seed": 42,
"train_batch_size": 1,
"version_2_with_negative": true,
"warmup_steps": 814,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 65.16946363935504,
"f1": 67.87348075352251,
"total": 6078,
"HasAns_exact": 69.51890034364261,
"HasAns_f1": 75.16667217179045,
"HasAns_total": 2910,
"NoAns_exact": 61.17424242424242,
"NoAns_f1": 61.17424242424242,
"NoAns_total": 3168,
"best_exact": 65.16946363935504,
"best_exact_thresh": 0.0,
"best_f1": 67.87348075352243,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "distilbert-base-uncased-distilled-squad",
"model_type": "distilbert",
"num_train_epochs": 4,
"per_gpu_train_batch_size": 32,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 32,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 75.32082922013821,
"f1": 78.66699523704254,
"total": 6078,
"HasAns_exact": 74.84536082474227,
"HasAns_f1": 81.83436324767868,
"HasAns_total": 2910,
"NoAns_exact": 75.75757575757575,
"NoAns_f1": 75.75757575757575,
"NoAns_total": 3168,
"best_exact": 75.32082922013821,
"best_exact_thresh": 0.0,
"best_f1": 78.66699523704266,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "roberta-base",
"model_type": "roberta",
"num_train_epochs": 4,
"per_gpu_train_batch_size": 16,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 16,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
@@ -0,0 +1,39 @@
# ClinicalBERT - Bio + Clinical BERT Model
The [Publicly Available Clinical BERT Embeddings](https://arxiv.org/abs/1904.03323) paper contains four unique clinicalBERT models: initialized with BERT-Base (`cased_L-12_H-768_A-12`) or BioBERT (`BioBERT-Base v1.0 + PubMed 200K + PMC 270K`) & trained on either all MIMIC notes or only discharge summaries.
This model card describes the Bio+Clinical BERT model, which was initialized from [BioBERT](https://arxiv.org/abs/1901.08746) & trained on all MIMIC notes.
## Pretraining Data
The `Bio_ClinicalBERT` model was trained on all notes from [MIMIC III](https://www.nature.com/articles/sdata201635), a database containing electronic health records from ICU patients at the Beth Israel Hospital in Boston, MA. For more details on MIMIC, see [here](https://mimic.physionet.org/). All notes from the `NOTEEVENTS` table were included (~880M words).
## Model Pretraining
### Note Preprocessing
Each note in MIMIC was first split into sections using a rules-based section splitter (e.g. discharge summary notes were split into "History of Present Illness", "Family History", "Brief Hospital Course", etc. sections). Then each section was split into sentences using SciSpacy (`en core sci md` tokenizer).
### Pretraining Procedures
The model was trained using code from [Google's BERT repository](https://github.com/google-research/bert) on a GeForce GTX TITAN X 12 GB GPU. Model parameters were initialized with BioBERT (`BioBERT-Base v1.0 + PubMed 200K + PMC 270K`).
### Pretraining Hyperparameters
We used a batch size of 32, a maximum sequence length of 128, and a learning rate of 5 · 10−5 for pre-training our models. The models trained on all MIMIC notes were trained for 150,000 steps. The dup factor for duplicating input data with different masks was set to 5. All other default parameters were used (specifically, masked language model probability = 0.15
and max predictions per sequence = 20).
## How to use the model
Load the model via the transformers library:
```
from transformers import AutoTokenizer, AutoModel
tokenizer = AutoTokenizer.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
model = AutoModel.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
```
## More Information
Refer to the original paper, [Publicly Available Clinical BERT Embeddings](https://arxiv.org/abs/1904.03323) (NAACL Clinical NLP Workshop 2019) for additional details and performance on NLI and NER tasks.
## Questions?
Post a Github issue on the [clinicalBERT repo](https://github.com/EmilyAlsentzer/clinicalBERT) or email emilya@mit.edu with any questions.
@@ -0,0 +1,39 @@
# ClinicalBERT - Bio + Discharge Summary BERT Model
The [Publicly Available Clinical BERT Embeddings](https://arxiv.org/abs/1904.03323) paper contains four unique clinicalBERT models: initialized with BERT-Base (`cased_L-12_H-768_A-12`) or BioBERT (`BioBERT-Base v1.0 + PubMed 200K + PMC 270K`) & trained on either all MIMIC notes or only discharge summaries.
This model card describes the Bio+Discharge Summary BERT model, which was initialized from [BioBERT](https://arxiv.org/abs/1901.08746) & trained on only discharge summaries from MIMIC.
## Pretraining Data
The `Bio_Discharge_Summary_BERT` model was trained on all discharge summaries from [MIMIC III](https://www.nature.com/articles/sdata201635), a database containing electronic health records from ICU patients at the Beth Israel Hospital in Boston, MA. For more details on MIMIC, see [here](https://mimic.physionet.org/). All notes from the `NOTEEVENTS` table were included (~880M words).
## Model Pretraining
### Note Preprocessing
Each note in MIMIC was first split into sections using a rules-based section splitter (e.g. discharge summary notes were split into "History of Present Illness", "Family History", "Brief Hospital Course", etc. sections). Then each section was split into sentences using SciSpacy (`en core sci md` tokenizer).
### Pretraining Procedures
The model was trained using code from [Google's BERT repository](https://github.com/google-research/bert) on a GeForce GTX TITAN X 12 GB GPU. Model parameters were initialized with BioBERT (`BioBERT-Base v1.0 + PubMed 200K + PMC 270K`).
### Pretraining Hyperparameters
We used a batch size of 32, a maximum sequence length of 128, and a learning rate of 5 · 10−5 for pre-training our models. The models trained on all MIMIC notes were trained for 150,000 steps. The dup factor for duplicating input data with different masks was set to 5. All other default parameters were used (specifically, masked language model probability = 0.15
and max predictions per sequence = 20).
## How to use the model
Load the model via the transformers library:
```
from transformers import AutoTokenizer, AutoModel
tokenizer = AutoTokenizer.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
model = AutoModel.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
```
## More Information
Refer to the original paper, [Publicly Available Clinical BERT Embeddings](https://arxiv.org/abs/1904.03323) (NAACL Clinical NLP Workshop 2019) for additional details and performance on NLI and NER tasks.
## Questions?
Post a Github issue on the [clinicalBERT repo](https://github.com/EmilyAlsentzer/clinicalBERT) or email emilya@mit.edu with any questions.
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