Compare commits

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Author SHA1 Message Date
Thomas Wolf 4344c34e11 cleaner mem logging 2020-03-26 17:32:09 +01:00
Manuel Romero 7420a6a9cc Create card for model GPT-2-finetuned-CORD19 2020-03-26 09:10:09 -04:00
Patrick von Platen 022e8fab97 Adds translation pipeline (#3419)
* fix merge conflicts

* add t5 summarization example

* change parameters for t5 summarization

* make style

* add first code snippet for translation

* only add prefixes

* add prefix patterns

* make style

* renaming

* fix conflicts

* remove unused patterns

* solve conflicts

* fix merge conflicts

* remove translation example

* remove summarization example

* make sure tensors are in numpy for float comparsion

* re-add t5 config

* fix t5 import config typo

* make style

* remove unused numpy statements

* update doctstring

* import translation pipeline
2020-03-26 13:50:58 +01:00
HUSEIN ZOLKEPLI 3c5c567507 Update model card huseinzol05/bert-base-bahasa-cased (#3425)
* add bert bahasa readme

* update readme

* update readme

* added xlnet
2020-03-26 07:50:27 -04:00
Patrick von Platen 9c683ef01e Add t5 to pipeline(task='summarization') (#3413)
* solve conflicts

* move warnings below

* incorporate changes

* add pad_to_max_length to pipelines

* add bug fix for T5 beam search

* add prefix patterns

* make style

* fix conflicts

* adapt pipelines for task specific parameters

* improve docstring

* remove unused patterns
2020-03-26 11:03:13 +01:00
Lysandre Debut ffcffebe85 Force the return of token type IDs (#3439) 2020-03-26 09:41:36 +01:00
Travis McGuire 010e0460b2 Updated/added model cards (#3435) 2020-03-25 16:40:03 -04:00
Patrick von Platen ffa17fe322 Extend config with task specific configs. (#3433)
* add new default configs

* change prefix default to None
2020-03-25 21:32:04 +01:00
Julien Chaumond 83272a3853 Experiment w/ dataclasses (including Py36) (#3423)
* [ci] Also run test_examples in py37

(will revert at the end of the experiment)

* InputExample: use immutable dataclass

* [deps] Install dataclasses for Py<3.7

* [skip ci] Revert "[ci] Also run test_examples in py37"

This reverts commit d29afd9959786b77759b0b8fa4e6b4335b952015.
2020-03-25 11:10:20 -04:00
Gabriele Sarti ccbe839ee0 Added BioBERT-NLI model card (#3421) 2020-03-24 21:15:55 -04:00
Andre Carrera 3d76df3a12 BART for summarization training with CNN/DM using pytorch-lightning 2020-03-24 21:00:24 -04:00
Julien Chaumond eaabaaf750 [run_language_modeling] Fix: initialize a new model from a config object 2020-03-24 17:56:40 -04:00
Julien Chaumond f8823bad9a Expose missing mappings (see #3415) 2020-03-24 17:46:25 -04:00
Julien Chaumond d0c36a7b72 [ci] Partial revert of 18eec3a984 due to fbc5bf10cf 2020-03-24 12:10:43 -04:00
LysandreJik fbc5bf10cf v2.6.0 release: isort un-pinned 2020-03-24 11:52:02 -04:00
Manuel Romero b88bda6af3 Add right model and tokenizer path in example 2020-03-24 11:30:12 -04:00
Stefan Schweter b31ef225cf [model_cards] 🇹🇷 Add new (uncased, 128k) BERTurk model 2020-03-24 11:29:06 -04:00
Stefan Schweter b4009cb001 [model_cards] 🇹🇷 Add new (cased, 128k) BERTurk model 2020-03-24 11:29:06 -04:00
Stefan Schweter d3283490ef [model_cards] 🇹🇷 Add new (uncased) BERTurk model 2020-03-24 11:29:06 -04:00
Mohamed El-Geish e279a312d6 Model cards for CS224n SQuAD2.0 models (#3406)
* Model cards for CS224n SQuAD2.0 models

* consistent spacing
2020-03-24 11:28:33 -04:00
Gabriele Sarti 7372e62b2c Added precisions in SciBERT-NLI model card (#3410) 2020-03-24 11:01:56 -04:00
LysandreJik 471cce24b3 Release: v2.6.0 2020-03-24 10:37:32 -04:00
Patrick von Platen e392ba6938 Add camembert integration tests (#3375)
* add integration tests for camembert

* use jplu/tf-camembert fro the moment

* make style
2020-03-24 10:18:37 +01:00
Julien Chaumond a8e3336a85 [examples] Use AutoModels in more examples 2020-03-23 20:11:14 -04:00
Julien Chaumond ec6766a363 [deps] scikit-learn's transient issue was fixed 2020-03-23 18:38:09 -04:00
Julien Chaumond f7dcf8fcea [BertAbs] Move files around for more consistent naming 2020-03-23 13:58:49 -04:00
Julien Chaumond e25c4f4027 [ALBERT] move things around for more consistent naming
see #3359

cc @lysandrejik
2020-03-23 13:58:21 -04:00
Manuel Romero 85b324bee5 Add comparison table with older brother in family 2020-03-23 12:11:20 -04:00
Manuel Romero b7aa077a63 Create card for the model 2020-03-23 12:10:41 -04:00
Manuel Romero f740177c87 Add comparison table with new models 2020-03-23 12:10:23 -04:00
LysandreJik e52482909b Correct order for dev/quality dependencies
cc @julien-c
2020-03-23 12:01:23 -04:00
Gabriele Sarti 28424906c2 Added scibert-nli model card 2020-03-23 11:55:41 -04:00
Julien Chaumond 18eec3a984 [ci] simpler way to load correct version of isort
hat/tip @bramvanroy
2020-03-23 10:03:22 -04:00
Julien Chaumond cf72479bf1 One last reorder of {scheduler,optimizer}.step() 2020-03-20 18:05:50 -04:00
Elijah Rippeth 634bf6cf7e fixes lr_scheduler warning
For more details, see https://pytorch.org/docs/stable/optim.html#how-to-adjust-learning-rate
2020-03-20 18:03:50 -04:00
Travis McGuire 265709f5cd New model, new model cards 2020-03-20 18:01:01 -04:00
Bram Vanroy 115abd2166 Handle pinned version of isort
The CONTRIBUTING file pins to a specific version of isort, so we might as well install that in `dev` . This makes it easier for contributors so they don't have to manually install the specific commit.
2020-03-20 18:00:04 -04:00
Patrick von Platen 95e00d0808 Clean special token init in modeling_....py (#3264)
* make style

* fix conflicts
2020-03-20 21:41:04 +01:00
Nitish Shirish Keskar 8becb73293 removing torch.cuda.empty_cache() from TF function (#3267)
torch.cuda.empty_cache() was being called from a TF function (even when torch is unavailable)
not sure any replacement is needed if TF OOMs
2020-03-19 23:25:30 +01:00
Julien Chaumond ecfd336318 Simpler Error message when loading config/model with .from_pretrained() (#3341) 2020-03-19 23:23:03 +01:00
Kyeongpil Kang 8eeefcb576 Update 01-training-tokenizers.ipynb (typo issue) (#3343)
I found there are two grammar errors or typo issues in the explanation of the encoding properties.

The original sentences:
If your was made of multiple \"parts\" such as (question, context), then this would be a vector with for each token the segment it belongs to
If your has been truncated into multiple subparts because of a length limit (for BERT for example the sequence length is limited to 512), this will contain all the remaining overflowing parts.

I think "input" should be inserted after the phrase "If your".
2020-03-19 23:21:49 +01:00
Patrick von PlatenandMorgan Funtowicz bbf26c4e61 Support T5 Generation (#3228)
* fix conflicts

* update bart max length test

* correct spelling mistakes

* implemented model specific encode function

* fix merge conflicts

* better naming

* save intermediate state -> need to rethink strucuture a bit

* leave tf problem as it is for now

* current version

* add layers.pop

* remove ipdb

* make style

* clean return cut decoding

* remove ipdbs

* Fix restoring layers in the decoders that doesnt exists.

* push good intermediate solution for now

* fix conflicts

* always good to refuse to merge conflicts when rebasing

* fix small bug

* improve function calls

* remove unused file

* add correct scope behavior for t5_generate

Co-authored-by: Morgan Funtowicz <funtowiczmo@gmail.com>
2020-03-19 23:18:23 +01:00
Julien Chaumond 656e1386a2 Fix #3305: run_ner only possible on ModelForTokenClassification models 2020-03-19 16:41:28 -04:00
husein zolkepli 0c44b11917 add bert bahasa readme 2020-03-19 15:08:19 -04:00
Manuel Romero e99af3b17b Create model card for bert-small-finetuned-squadv2 2020-03-19 15:07:55 -04:00
Manuel Romero 39db055268 Merge pull request #3348 from mrm8488/patch-28
Create card for BERT-Mini finetuned on SQuAD v2
2020-03-19 15:07:39 -04:00
Manuel Romero dedc7a8fdb Create card for BERT-Tiny fine-tuned on SQuAD v2
- Only 17MB of Model weights!!
2020-03-19 15:07:22 -04:00
Manuel Romero 676adf8625 Created card for spanbert-finetuned-squadv1 2020-03-19 15:06:35 -04:00
Antti Virtanen 11d8bcc9d7 Add model cards for FinBERT. (#3331)
* Add a model card for FinBERT

This is a copy of https://github.com/TurkuNLP/FinBERT/blob/master/README.md.

* Added a file for uncased.

* Add metadata for cased.

* Added metadata for uncased.
2020-03-19 15:06:01 -04:00
Lysandre Debut f049be7ad4 Export ALBERT main layer in TensorFlow (#3354) 2020-03-19 13:53:05 -04:00
Kyeongpil Kang 3bedfd3347 Fix wrong link for the notebook file (#3344)
For the tutorial of "How to generate text", the URL link was wrong (it was linked to the tutorial of "How to train a language model").

I fixed the URL.
2020-03-19 17:22:47 +01:00
Serkan KarakulakandLysandreJik b2c2c31c60 Minor Bug Fix for Running Roberta on Glue (#3240)
* added return_token_type_ids argument for tokenizers which do not generate return_type_ids by default

* fixed styling

* Style

Co-authored-by: LysandreJik <lysandre.debut@reseau.eseo.fr>
2020-03-19 12:08:31 -04:00
Sam Shleifer 4e4403c9b4 [BART] torch 1.0 compatibility (#3322)
* config.activation_function
2020-03-19 11:56:54 -04:00
mataney c44a17db1b [FIX] not training when epoch is small (#3006)
* solving bug where for small epochs and large gradient_accumulation_steps we never train

* black formatting

* no need to change these files
2020-03-19 11:21:21 -04:00
Sam Shleifer ad7233fc01 [BART] cleanup: remove redundant kwargs, improve docstrings (#3319) 2020-03-19 11:16:51 -04:00
Mohamed El-Geish cd21d8bc00 Typo in warning message (#3219)
`T5Tokenizer` instead of `XLNetTokenizer`
2020-03-19 09:49:25 -04:00
Matthew Goldey 8d3e218ea6 fix typo in docstring demonstrating usage (#3213) 2020-03-19 09:47:54 -04:00
Patrick von Platen cec3cdda15 Fix input ids can be none attn mask (#3345)
* fix issue 3289

* fix attention mask if input_ids None behavior
2020-03-19 09:55:17 +01:00
Junyi_Li f6d813aaaa Create README.md 2020-03-18 23:45:02 -04:00
Junyi_Li 939328111b Create README.md
roberta_chinese_base card
2020-03-18 23:44:12 -04:00
Junyi_Li 29442d2edf Create README.md
albert_chinese_tiny card
2020-03-18 23:43:49 -04:00
Kyle Lo 20139b7c8d Added model cards for SciBERT models uploaded under AllenAI org (#3330)
* Create README.md

* model card

* add model card for cased
2020-03-18 15:45:11 -04:00
Morgan Funtowicz cae334c43c Improve fill-mask pipeline example in 03-pipelines notebook.
Remove hardcoded mask_token and use the value provided by the tokenizer.
2020-03-18 17:11:42 +01:00
Branden Chan 4b1970bb4c Create README.md 2020-03-18 11:37:17 -04:00
Lysandre Debut d6afbd323d XLM-R Tokenizer now passes common tests + Integration tests (#3198)
* XLM-R now passes common tests + Integration tests

* Correct mask index

* Model input names

* Style

* Remove text preprocessing

* Unneccessary import
2020-03-18 09:52:49 -04:00
Patrick von Platen 292186a3e7 Adding LM Head to Transfo-XL and first step to fixing problem with Adaptive Embeddings in TransfoXL (#3286)
* first commit

* work in progress

* make language generation task pass

* update to working version for LM

* delete print

* remove dead code

* make style
2020-03-18 09:24:27 -04:00
Patrick von Platen efdb46b6e2 add link to blog post (#3326) 2020-03-18 13:24:28 +01:00
Patrick von Platen ddb10c6447 improve doctstring (#3327) 2020-03-18 13:24:09 +01:00
Junyi_Li d7f98cd3ef Init card for model 2020-03-18 07:55:27 -04:00
Sam Shleifer 38a555a83c Add Summarization to Pipelines (#3128)
* passing

* Undo stupid chg

* docs

* undo rename

* delete-cruft

* only import if you have torch

* Dont rely on dict ordering

* Fix dict ordering upstream

* docstring link

* docstring link

* remove trailing comma for 3.5 compat

* new name

* delegate kwarging

* Update kwargs
2020-03-17 18:04:21 -04:00
J.P Lee 2b60a26b46 Update examples/ner/run_ner.py to use AutoModel (#3305)
* Update examples/ner/run_ner.py to use AutoModel

* Fix missing code and apply `make style` command
2020-03-17 12:30:10 -04:00
Manuel Romero e41212c715 Create model card for CodeBERTaPy (#3309) 2020-03-17 12:29:11 -04:00
Julien Chaumond 0f1bc0d68e [model_cards] Add google thumbnail 2020-03-17 12:02:51 -04:00
Nathan Raw 930c9412b4 [WIP] Lightning glue example (#3290)
* ✨ Alter base pl transformer to use automodels

* 🐛 Add batch size env variable to function call

* 💄 Apply black code style from Makefile

* 🚚 Move lightning base out of ner directory

* ✨ Add lightning glue example

* 💄 self

* move _feature_file to base class

* ✨ Move eval logging to custom callback

* 💄 Apply black code style

* 🐛 Add parent to pythonpath, remove copy command

* 🐛 Add missing max_length kwarg
2020-03-17 11:46:42 -04:00
Patrick von Platen e8f44af5bf [generate] do_sample default back to False (#3298)
* change do_samples back

* None better default as boolean

* adapt do_sample to True in test example

* make style
2020-03-17 10:52:37 -04:00
Thomas Wolf 2187c49f5c CPU/GPU memory benchmarking utilities - Remove support for python 3.5 (now only 3.6+) (#3186)
* memory benchmark rss

* have both forward pass and line-by-line mem tracing

* cleaned up tracing

* refactored and cleaning up API

* no f-strings yet...

* add GPU mem logging

* fix GPU memory monitoring

* style and quality

* clean up and doc

* update with comments

* Switching to python 3.6+

* fix quality
2020-03-17 10:17:11 -04:00
Jannes bd3feddf67 Create README.md (#3306)
* Create README.md

* Updated README.md
2020-03-17 09:05:11 -04:00
Julien Chaumond 68ef0a111f [model_cards] Symlink all Google AI's BERT Miniatures to source model card 2020-03-16 23:37:42 -04:00
Sam Shleifer b2c1a447fe [BART] Delete redundant unit test (#3302) 2020-03-16 23:09:10 -04:00
iuliaturc-google b2028cc26b Add model card for Google AI's BERT Miniatures (#3301)
This model card is intended to be shared among all models under google/bert_uncased_*
(We'll need some support from HuggingFace to get this card cross-linked from all models)
2020-03-16 21:51:46 -04:00
Patrick von Platen 4759176313 add camembert for Question answering for examples 2020-03-16 14:42:11 -04:00
Sam Shleifer 11573231c6 [BART] generation_mode as a kwarg not a class attribute (#3278) 2020-03-16 12:47:53 -04:00
Manuel Romero de697935a2 Create model card for spanbert-finetuned-squadv2 2020-03-16 12:32:46 -04:00
Manuel Romero 3ddd2029bc Create CodeBERTaJS model card 2020-03-16 12:23:01 -04:00
Julien PluandLysandre Debut 879e1d3234 Add TF2 version of FlauBERT (#2700)
* Add TF2 version of FlauBERT

* Add TF2 version of FlauBERT

* Add documentation

* Apply style and quality

* Apply style once again

Co-authored-by: Lysandre Debut <lysandre@huggingface.co>
2020-03-16 09:29:21 -04:00
Patrick von Platen af471ce5e8 Improved Error message when loading config/model with .from_pretrained() (#3247)
* better error message

* better error message

* update to model identifier instead of url

* update to model identifier instead of ur
2020-03-16 09:48:30 +01:00
Sam Shleifer 5ea8ba67b4 [BART] Remove unused kwargs (#3279)
* Remove unused kwargs
* dont call forward in tests
2020-03-15 23:00:44 -04:00
Thomas Wolf 3814e167d9 Merge pull request #3225 from patrickvonplaten/finalize_merge_bart_generate_into_default_generate
Complete merge Seq-2-Seq generation into default generation
2020-03-14 15:08:59 +01:00
Sam Shleifer 2bd79e23de [BART] FP16 testing fixes (#3266) 2020-03-13 19:48:26 -04:00
Julien Chaumond 8320feec09 [model_cards] CodeBERTa 2020-03-13 18:28:09 -04:00
Patrick von Platen ab756f713c add gpt2-xl for tf 2020-03-13 16:40:35 -04:00
Patrick von Platen 4f75d380a4 make style 2020-03-13 16:35:52 +01:00
Patrick von Platen c2ee3840ae update file to new starting token logic 2020-03-13 16:34:44 +01:00
Benjamin Muller cc4c37952a Create camembert-base-README.md 2020-03-13 09:35:53 -04:00
dependabot[bot] afea70c01c Bump psutil from 5.6.3 to 5.6.6 in /examples/distillation
Bumps [psutil](https://github.com/giampaolo/psutil) from 5.6.3 to 5.6.6.
- [Release notes](https://github.com/giampaolo/psutil/releases)
- [Changelog](https://github.com/giampaolo/psutil/blob/master/HISTORY.rst)
- [Commits](https://github.com/giampaolo/psutil/compare/release-5.6.3...release-5.6.6)

Signed-off-by: dependabot[bot] <support@github.com>
2020-03-12 21:14:56 -04:00
Sam Shleifer 087465b943 add BART to README (#3255) 2020-03-12 19:38:05 -04:00
Patrick von Platen 6a82f774f2 fix typo 2020-03-12 21:10:51 +01:00
Patrick von Platen f1c71da115 fix eos_token_ids in test 2020-03-12 21:00:54 +01:00
Patrick von Platen 6047f46b19 re-add eos token to get good bart results 2020-03-12 20:17:50 +01:00
Patrick von Platen c11160114a small clean-up 2020-03-12 20:02:35 +01:00
152 changed files with 5931 additions and 1215 deletions
+5 -5
View File
@@ -3,7 +3,7 @@ jobs:
run_tests_torch_and_tf:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
environment:
OMP_NUM_THREADS: 1
resource_class: xlarge
@@ -46,7 +46,7 @@ jobs:
run_tests_custom_tokenizers:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
environment:
RUN_CUSTOM_TOKENIZERS: yes
steps:
@@ -56,7 +56,7 @@ jobs:
run_examples_torch:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
environment:
OMP_NUM_THREADS: 1
resource_class: xlarge
@@ -69,7 +69,7 @@ jobs:
deploy_doc:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
steps:
- add_ssh_keys:
fingerprints:
@@ -94,7 +94,7 @@ jobs:
check_repository_consistency:
working_directory: ~/transformers
docker:
- image: circleci/python:3.5
- image: circleci/python:3.6
resource_class: small
parallelism: 1
steps:
+4 -3
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@@ -66,7 +66,7 @@ Choose the right framework for every part of a model's lifetime
## Installation
This repo is tested on Python 3.5+, PyTorch 1.0.0+ and TensorFlow 2.0.0-rc1
This repo is tested on Python 3.6+, PyTorch 1.0.0+ and TensorFlow 2.0.0-rc1
You should install 🤗 Transformers in a [virtual environment](https://docs.python.org/3/library/venv.html). If you're unfamiliar with Python virtual environments, check out the [user guide](https://packaging.python.org/guides/installing-using-pip-and-virtual-environments/).
@@ -163,8 +163,9 @@ At some point in the future, you'll be able to seamlessly move from pre-training
13. **[XLM-RoBERTa](https://github.com/pytorch/fairseq/tree/master/examples/xlmr)** (from Facebook AI), released together with the paper [Unsupervised Cross-lingual Representation Learning at Scale](https://arxiv.org/abs/1911.02116) by Alexis Conneau*, Kartikay Khandelwal*, Naman Goyal, Vishrav Chaudhary, Guillaume Wenzek, Francisco Guzmán, Edouard Grave, Myle Ott, Luke Zettlemoyer and Veselin Stoyanov.
14. **[MMBT](https://github.com/facebookresearch/mmbt/)** (from Facebook), released together with the paper a [Supervised Multimodal Bitransformers for Classifying Images and Text](https://arxiv.org/pdf/1909.02950.pdf) by Douwe Kiela, Suvrat Bhooshan, Hamed Firooz, Davide Testuggine.
15. **[FlauBERT](https://github.com/getalp/Flaubert)** (from CNRS) released with the paper [FlauBERT: Unsupervised Language Model Pre-training for French](https://arxiv.org/abs/1912.05372) by Hang Le, Loïc Vial, Jibril Frej, Vincent Segonne, Maximin Coavoux, Benjamin Lecouteux, Alexandre Allauzen, Benoît Crabbé, Laurent Besacier, Didier Schwab.
16. **[Other community models](https://huggingface.co/models)**, contributed by the [community](https://huggingface.co/users).
17. Want to contribute a new model? We have added a **detailed guide and templates** to guide you in the process of adding a new model. You can find them in the [`templates`](./templates) folder of the repository. Be sure to check the [contributing guidelines](./CONTRIBUTING.md) and contact the maintainers or open an issue to collect feedbacks before starting your PR.
16. **[BART](https://github.com/pytorch/fairseq/tree/master/examples/bart)** (from Facebook) released with the paper [BART: Denoising Sequence-to-Sequence Pre-training for Natural Language Generation, Translation, and Comprehension](https://arxiv.org/pdf/1910.13461.pdf) by Mike Lewis, Yinhan Liu, Naman Goyal, Marjan Ghazvininejad, Abdelrahman Mohamed, Omer Levy, Ves Stoyanov and Luke Zettlemoyer.
17. **[Other community models](https://huggingface.co/models)**, contributed by the [community](https://huggingface.co/users).
18. Want to contribute a new model? We have added a **detailed guide and templates** to guide you in the process of adding a new model. You can find them in the [`templates`](./templates) folder of the repository. Be sure to check the [contributing guidelines](./CONTRIBUTING.md) and contact the maintainers or open an issue to collect feedbacks before starting your PR.
These implementations have been tested on several datasets (see the example scripts) and should match the performances of the original implementations (e.g. ~93 F1 on SQuAD for BERT Whole-Word-Masking, ~88 F1 on RocStories for OpenAI GPT, ~18.3 perplexity on WikiText 103 for Transformer-XL, ~0.916 Peason R coefficient on STS-B for XLNet). You can find more details on the performances in the Examples section of the [documentation](https://huggingface.co/transformers/examples.html).
+1 -1
View File
@@ -26,7 +26,7 @@ author = u'huggingface'
# The short X.Y version
version = u''
# The full version, including alpha/beta/rc tags
release = u'2.5.1'
release = u'2.6.0'
# -- General configuration ---------------------------------------------------
+1 -1
View File
@@ -1,6 +1,6 @@
# Installation
Transformers is tested on Python 3.5+ and PyTorch 1.1.0
Transformers is tested on Python 3.6+ and PyTorch 1.1.0
## With pip
+5
View File
@@ -61,3 +61,8 @@ QuestionAnsweringPipeline
.. autoclass:: transformers.QuestionAnsweringPipeline
SummarizationPipeline
==========================================
.. autoclass:: transformers.SummarizationPipeline
+162 -22
View File
@@ -24,7 +24,15 @@ import timeit
from time import time
from typing import List
from transformers import AutoConfig, AutoTokenizer, is_tf_available, is_torch_available
from transformers import (
AutoConfig,
AutoTokenizer,
MemorySummary,
is_tf_available,
is_torch_available,
start_memory_tracing,
stop_memory_tracing,
)
if is_tf_available():
@@ -250,15 +258,21 @@ as they entered."""
def create_setup_and_compute(
model_names: List[str],
batch_sizes: List[int],
slice_sizes: List[int],
gpu: bool = True,
tensorflow: bool = False,
average_over: int = 3,
no_speed: bool = False,
no_memory: bool = False,
verbose: bool = False,
torchscript: bool = False,
xla: bool = False,
amp: bool = False,
fp16: bool = False,
save_to_csv: bool = False,
csv_filename: str = f"results_{round(time())}.csv",
csv_memory_filename: str = f"memory_{round(time())}.csv",
):
if xla:
tf.config.optimizer.set_jit(True)
@@ -267,11 +281,25 @@ def create_setup_and_compute(
if tensorflow:
dictionary = {model_name: {} for model_name in model_names}
results = _compute_tensorflow(model_names, dictionary, average_over, amp)
results = _compute_tensorflow(
model_names, batch_sizes, slice_sizes, dictionary, average_over, amp, no_speed, no_memory, verbose
)
else:
device = "cuda" if (gpu and torch.cuda.is_available()) else "cpu"
dictionary = {model_name: {} for model_name in model_names}
results = _compute_pytorch(model_names, dictionary, average_over, device, torchscript, fp16)
results = _compute_pytorch(
model_names,
batch_sizes,
slice_sizes,
dictionary,
average_over,
device,
torchscript,
fp16,
no_speed,
no_memory,
verbose,
)
print("=========== RESULTS ===========")
for model_name in model_names:
@@ -280,13 +308,19 @@ def create_setup_and_compute(
print("\t\t" + f"===== BATCH SIZE: {batch_size} =====")
for slice_size in results[model_name]["ss"]:
result = results[model_name]["results"][batch_size][slice_size]
memory = results[model_name]["memory"][batch_size][slice_size]
if isinstance(result, str):
print(f"\t\t{model_name}/{batch_size}/{slice_size}: " f"{result}")
print(f"\t\t{model_name}/{batch_size}/{slice_size}: " f"{result} " f"{memory}")
else:
print(f"\t\t{model_name}/{batch_size}/{slice_size}: " f"{(round(1000 * result) / 1000)}" f"s")
print(
f"\t\t{model_name}/{batch_size}/{slice_size}: "
f"{(round(1000 * result) / 1000)}"
f"s "
f"{memory}"
)
if save_to_csv:
with open(csv_filename, mode="w") as csv_file:
with open(csv_filename, mode="w") as csv_file, open(csv_memory_filename, mode="w") as csv_memory_file:
fieldnames = [
"model",
"1x8",
@@ -317,6 +351,8 @@ def create_setup_and_compute(
writer = csv.DictWriter(csv_file, fieldnames=fieldnames)
writer.writeheader()
memory_writer = csv.DictWriter(csv_memory_file, fieldnames=fieldnames)
memory_writer.writeheader()
for model_name in model_names:
model_results = {
@@ -326,8 +362,59 @@ def create_setup_and_compute(
}
writer.writerow({"model": model_name, **model_results})
model_memory_results = {
f"{bs}x{ss}": results[model_name]["memory"][bs][ss]
for bs in results[model_name]["memory"]
for ss in results[model_name]["memory"][bs]
}
memory_writer.writerow({"model": model_name, **model_memory_results})
def _compute_pytorch(model_names, dictionary, average_over, device, torchscript, fp16):
def print_summary_statistics(summary: MemorySummary):
print(
"\nLines by line memory consumption:\n"
+ "\n".join(
f"{state.frame.filename}:{state.frame.line_number}: mem {state.cpu_gpu}: {state.frame.line_text}"
for state in summary.relative_mem_list
)
)
print(
"\nLines with top memory increase:\n"
+ "\n".join(
f"=> {state.frame.filename}:{state.frame.line_number}: mem {state.cpu_gpu_with_units}: {state.frame.line_text}"
for state in summary.relative_mem_sorted[:6]
)
)
print(
"\nLines with lowest memory increase:\n"
+ "\n".join(
f"=> {state.frame.filename}:{state.frame.line_number}: mem {state.cpu_gpu_with_units}: {state.frame.line_text}"
for state in summary.relative_mem_sorted[-6:]
)
)
print(
"\nLines with peak memory used:\n"
+ "\n".join(
f"=> {state.frame.filename}:{state.frame.line_number}: mem {state.cpu_gpu_with_units}: {state.frame.line_text}"
for state in summary.absolute_mem_sorted[:6]
)
)
print(f"\nTotal memory increase: {summary.relative_mem_total.cpu_gpu_with_units}")
def _compute_pytorch(
model_names,
batch_sizes,
slice_sizes,
dictionary,
average_over,
device,
torchscript,
fp16,
no_speed,
no_memory,
verbose,
):
for c, model_name in enumerate(model_names):
print(f"{c + 1} / {len(model_names)}")
config = AutoConfig.from_pretrained(model_name, torchscript=torchscript)
@@ -337,17 +424,17 @@ def _compute_pytorch(model_names, dictionary, average_over, device, torchscript,
tokenized_sequence = tokenizer.encode(input_text, add_special_tokens=False)
max_input_size = tokenizer.max_model_input_sizes[model_name]
batch_sizes = [1, 2, 4, 8]
slice_sizes = [8, 64, 128, 256, 512, 1024]
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}}
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}, "memory": {}}
dictionary[model_name]["results"] = {i: {} for i in batch_sizes}
dictionary[model_name]["memory"] = {i: {} for i in batch_sizes}
for batch_size in batch_sizes:
if fp16:
model.half()
model.to(device)
model.eval()
for slice_size in slice_sizes:
if max_input_size is not None and slice_size > max_input_size:
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
@@ -362,18 +449,40 @@ def _compute_pytorch(model_names, dictionary, average_over, device, torchscript,
inference = model
inference(sequence)
print("Going through model with sequence of shape", sequence.shape)
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
if not no_memory:
# model.add_memory_hooks() # Forward method tracing (only for PyTorch models)
# Line by line memory tracing (all code in the module `transformers`) works for all models/arbitrary code
trace = start_memory_tracing("transformers")
inference(sequence)
summary = stop_memory_tracing(trace)
if verbose:
print_summary_statistics(summary)
dictionary[model_name]["memory"][batch_size][slice_size] = summary.relative_mem_total.cpu_gpu_with_units
else:
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
if not no_speed:
print("Going through model with sequence of shape", sequence.shape)
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
else:
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
except RuntimeError as e:
print("Doesn't fit on GPU.", e)
torch.cuda.empty_cache()
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
return dictionary
def _compute_tensorflow(model_names, dictionary, average_over, amp):
def _compute_tensorflow(
model_names, batch_sizes, slice_sizes, dictionary, average_over, amp, no_speed, no_memory, verbose
):
for c, model_name in enumerate(model_names):
print(f"{c + 1} / {len(model_names)}")
config = AutoConfig.from_pretrained(model_name)
@@ -383,11 +492,10 @@ def _compute_tensorflow(model_names, dictionary, average_over, amp):
tokenized_sequence = tokenizer.encode(input_text, add_special_tokens=False)
max_input_size = tokenizer.max_model_input_sizes[model_name]
batch_sizes = [1, 2, 4, 8]
slice_sizes = [8, 64, 128, 256, 512, 1024]
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}}
dictionary[model_name] = {"bs": batch_sizes, "ss": slice_sizes, "results": {}, "memory": {}}
dictionary[model_name]["results"] = {i: {} for i in batch_sizes}
dictionary[model_name]["memory"] = {i: {} for i in batch_sizes}
print("Using model", model)
@@ -409,13 +517,30 @@ def _compute_tensorflow(model_names, dictionary, average_over, amp):
# To make sure that the model is traced + that the tensors are on the appropriate device
inference(sequence)
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
if not no_memory:
# Line by line memory tracing (all code in the module `transformers`) works for all models/arbitrary code
trace = start_memory_tracing("transformers")
inference(sequence)
summary = stop_memory_tracing(trace)
if verbose:
print_summary_statistics(summary)
dictionary[model_name]["memory"][batch_size][slice_size] = str(summary.total)
else:
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
if not no_speed:
runtimes = timeit.repeat(lambda: inference(sequence), repeat=average_over, number=3)
average_time = sum(runtimes) / float(len(runtimes)) / 3.0
dictionary[model_name]["results"][batch_size][slice_size] = average_time
else:
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
except tf.errors.ResourceExhaustedError as e:
print("Doesn't fit on GPU.", e)
torch.cuda.empty_cache()
dictionary[model_name]["results"][batch_size][slice_size] = "N/A"
dictionary[model_name]["memory"][batch_size][slice_size] = "N/A"
return dictionary
@@ -433,6 +558,9 @@ def main():
"of all available model "
"architectures.",
)
parser.add_argument("--verbose", required=False, action="store_true", help="Verbose memory tracing")
parser.add_argument("--no_speed", required=False, action="store_true", help="Don't perform speed measurments")
parser.add_argument("--no_memory", required=False, action="store_true", help="Don't perform memory measurments")
parser.add_argument(
"--torch", required=False, action="store_true", help="Benchmark the Pytorch version of the " "models"
)
@@ -477,6 +605,8 @@ def main():
parser.add_argument(
"--average_over", required=False, default=30, type=int, help="Times an experiment will be run."
)
parser.add_argument("--batch_sizes", nargs="+", type=int, default=[1, 2, 4, 8])
parser.add_argument("--slice_sizes", nargs="+", type=int, default=[8, 64, 128, 256, 512, 1024])
args = parser.parse_args()
if args.models == "all":
@@ -501,6 +631,8 @@ def main():
if is_torch_available():
create_setup_and_compute(
model_names=args.models,
batch_sizes=args.batch_sizes,
slice_sizes=args.slice_sizes,
tensorflow=False,
gpu=args.torch_cuda,
torchscript=args.torchscript,
@@ -508,6 +640,9 @@ def main():
save_to_csv=args.save_to_csv,
csv_filename=args.csv_filename,
average_over=args.average_over,
no_speed=args.no_speed,
no_memory=args.no_memory,
verbose=args.verbose,
)
else:
raise ImportError("Trying to run a PyTorch benchmark but PyTorch was not found in the environment.")
@@ -516,12 +651,17 @@ def main():
if is_tf_available():
create_setup_and_compute(
model_names=args.models,
batch_sizes=args.batch_sizes,
slice_sizes=args.slice_sizes,
tensorflow=True,
xla=args.xla,
amp=args.amp,
save_to_csv=args.save_to_csv,
csv_filename=args.csv_filename,
average_over=args.average_over,
no_speed=args.no_speed,
no_memory=args.no_memory,
verbose=args.verbose,
)
else:
raise ImportError("Trying to run a TensorFlow benchmark but TensorFlow was not found in the environment.")
+1 -1
View File
@@ -249,8 +249,8 @@ def main():
losses = model(input_ids, mc_token_ids=mc_token_ids, lm_labels=lm_labels, mc_labels=mc_labels)
loss = args.lm_coef * losses[0] + losses[1]
loss.backward()
scheduler.step()
optimizer.step()
scheduler.step()
optimizer.zero_grad()
tr_loss += loss.item()
exp_average_loss = (
+1 -1
View File
@@ -3,5 +3,5 @@ transformers
gitpython==3.0.2
tensorboard>=1.14.0
tensorboardX==1.8
psutil==5.6.3
psutil==5.6.6
scipy==1.3.1
+9
View File
@@ -0,0 +1,9 @@
# GLUE Benchmark
Based on the script [`run_glue.py`](https://github.com/huggingface/transformers/blob/master/examples/run_glue.py).
#### Run PyTorch version using PyTorch-Lightning
Run `bash run_pl.sh` from the `glue` directory. This will also install `pytorch-lightning` and the requirements in `examples/requirements.txt`. It is a shell pipeline that will automatically download, pre-process the data and run the specified models. Logs are saved in `lightning_logs` directory.
Pass `--n_gpu` flag to change the number of GPUs. Default uses 1. At the end, the expected results are: `TEST RESULTS {'val_loss': tensor(0.0707), 'precision': 0.852427800698191, 'recall': 0.869537067011978, 'f1': 0.8608974358974358}`
+38
View File
@@ -0,0 +1,38 @@
# Install newest ptl.
pip install -U git+http://github.com/PyTorchLightning/pytorch-lightning/
# Install example requirements
pip install -r ../requirements.txt
# Download glue data
python3 ../../utils/download_glue_data.py
export TASK=mrpc
export DATA_DIR=./glue_data/MRPC/
export MAX_LENGTH=128
export LEARNING_RATE=2e-5
export BERT_MODEL=bert-base-cased
export MODEL_TYPE=bert
export BATCH_SIZE=32
export NUM_EPOCHS=3
export SEED=2
export OUTPUT_DIR_NAME=mrpc-pl-bert
export CURRENT_DIR=${PWD}
export OUTPUT_DIR=${CURRENT_DIR}/${OUTPUT_DIR_NAME}
# Make output directory if it doesn't exist
mkdir -p $OUTPUT_DIR
# Add parent directory to python path to access transformer_base.py
export PYTHONPATH="../":"${PYTHONPATH}"
python3 run_pl_glue.py --data_dir $DATA_DIR \
--model_type $MODEL_TYPE \
--task $TASK \
--model_name_or_path $BERT_MODEL \
--output_dir $OUTPUT_DIR \
--max_seq_length $MAX_LENGTH \
--learning_rate $LEARNING_RATE \
--num_train_epochs $NUM_EPOCHS \
--train_batch_size $BATCH_SIZE \
--seed $SEED \
--do_train \
--do_predict
+196
View File
@@ -0,0 +1,196 @@
import argparse
import glob
import logging
import os
import time
import numpy as np
import torch
from torch.utils.data import DataLoader, TensorDataset
from transformer_base import BaseTransformer, add_generic_args, generic_train
from transformers import glue_compute_metrics as compute_metrics
from transformers import glue_convert_examples_to_features as convert_examples_to_features
from transformers import glue_output_modes
from transformers import glue_processors as processors
from transformers import glue_tasks_num_labels
logger = logging.getLogger(__name__)
class GLUETransformer(BaseTransformer):
mode = "sequence-classification"
def __init__(self, hparams):
hparams.glue_output_mode = glue_output_modes[hparams.task]
num_labels = glue_tasks_num_labels[hparams.task]
super().__init__(hparams, num_labels, self.mode)
def forward(self, **inputs):
return self.model(**inputs)
def training_step(self, batch, batch_idx):
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.hparams.model_type != "distilbert":
inputs["token_type_ids"] = batch[2] if self.hparams.model_type in ["bert", "xlnet", "albert"] else None
outputs = self(**inputs)
loss = outputs[0]
tensorboard_logs = {"loss": loss, "rate": self.lr_scheduler.get_last_lr()[-1]}
return {"loss": loss, "log": tensorboard_logs}
def prepare_data(self):
"Called to initialize data. Use the call to construct features"
args = self.hparams
processor = processors[args.task]()
self.labels = processor.get_labels()
for mode in ["train", "dev"]:
cached_features_file = self._feature_file(mode)
if not os.path.exists(cached_features_file) and not args.overwrite_cache:
logger.info("Creating features from dataset file at %s", args.data_dir)
examples = (
processor.get_dev_examples(args.data_dir)
if mode == "dev"
else processor.get_train_examples(args.data_dir)
)
features = convert_examples_to_features(
examples,
self.tokenizer,
max_length=args.max_seq_length,
task=args.task,
label_list=self.labels,
output_mode=args.glue_output_mode,
pad_on_left=bool(args.model_type in ["xlnet"]), # pad on the left for xlnet
pad_token=self.tokenizer.convert_tokens_to_ids([self.tokenizer.pad_token])[0],
pad_token_segment_id=4 if args.model_type in ["xlnet"] else 0,
)
logger.info("Saving features into cached file %s", cached_features_file)
torch.save(features, cached_features_file)
def load_dataset(self, mode, batch_size):
"Load datasets. Called after prepare data."
# We test on dev set to compare to benchmarks without having to submit to GLUE server
mode = "dev" if mode == "test" else mode
cached_features_file = self._feature_file(mode)
logger.info("Loading features from cached file %s", cached_features_file)
features = torch.load(cached_features_file)
all_input_ids = torch.tensor([f.input_ids for f in features], dtype=torch.long)
all_attention_mask = torch.tensor([f.attention_mask for f in features], dtype=torch.long)
all_token_type_ids = torch.tensor([f.token_type_ids for f in features], dtype=torch.long)
if self.hparams.glue_output_mode == "classification":
all_labels = torch.tensor([f.label for f in features], dtype=torch.long)
elif self.hparams.glue_output_mode == "regression":
all_labels = torch.tensor([f.label for f in features], dtype=torch.float)
return DataLoader(
TensorDataset(all_input_ids, all_attention_mask, all_token_type_ids, all_labels),
batch_size=batch_size,
shuffle=True,
)
def validation_step(self, batch, batch_idx):
inputs = {"input_ids": batch[0], "attention_mask": batch[1], "labels": batch[3]}
if self.hparams.model_type != "distilbert":
inputs["token_type_ids"] = batch[2] if self.hparams.model_type in ["bert", "xlnet", "albert"] else None
outputs = self(**inputs)
tmp_eval_loss, logits = outputs[:2]
preds = logits.detach().cpu().numpy()
out_label_ids = inputs["labels"].detach().cpu().numpy()
return {"val_loss": tmp_eval_loss.detach().cpu(), "pred": preds, "target": out_label_ids}
def _eval_end(self, outputs):
val_loss_mean = torch.stack([x["val_loss"] for x in outputs]).mean().detach().cpu().item()
preds = np.concatenate([x["pred"] for x in outputs], axis=0)
if self.hparams.glue_output_mode == "classification":
preds = np.argmax(preds, axis=1)
elif self.hparams.glue_output_mode == "regression":
preds = np.squeeze(preds)
out_label_ids = np.concatenate([x["target"] for x in outputs], axis=0)
out_label_list = [[] for _ in range(out_label_ids.shape[0])]
preds_list = [[] for _ in range(out_label_ids.shape[0])]
results = {**{"val_loss": val_loss_mean}, **compute_metrics(self.hparams.task, preds, out_label_ids)}
ret = {k: v for k, v in results.items()}
ret["log"] = results
return ret, preds_list, out_label_list
def validation_end(self, outputs: list) -> dict:
ret, preds, targets = self._eval_end(outputs)
logs = ret["log"]
return {"val_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
def test_epoch_end(self, outputs):
# updating to test_epoch_end instead of deprecated test_end
ret, predictions, targets = self._eval_end(outputs)
# Converting to the dic required by pl
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master/\
# pytorch_lightning/trainer/logging.py#L139
logs = ret["log"]
# `val_loss` is the key returned by `self._eval_end()` but actually refers to `test_loss`
return {"avg_test_loss": logs["val_loss"], "log": logs, "progress_bar": logs}
@staticmethod
def add_model_specific_args(parser, root_dir):
# Add NER specific options
BaseTransformer.add_model_specific_args(parser, root_dir)
parser.add_argument(
"--max_seq_length",
default=128,
type=int,
help="The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--task", default="", type=str, required=True, help="The GLUE task to run",
)
parser.add_argument(
"--data_dir",
default=None,
type=str,
required=True,
help="The input data dir. Should contain the training files for the CoNLL-2003 NER task.",
)
parser.add_argument(
"--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets"
)
return parser
if __name__ == "__main__":
parser = argparse.ArgumentParser()
add_generic_args(parser, os.getcwd())
parser = GLUETransformer.add_model_specific_args(parser, os.getcwd())
args = parser.parse_args()
# If output_dir not provided, a folder will be generated in pwd
if args.output_dir is None:
args.output_dir = os.path.join("./results", f"{args.task}_{args.model_type}_{time.strftime('%Y%m%d_%H%M%S')}",)
os.makedirs(args.output_dir)
model = GLUETransformer(args)
trainer = generic_train(model, args)
# Optionally, predict on dev set and write to output_dir
if args.do_predict:
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpointepoch=*.ckpt"), recursive=True)))
GLUETransformer.load_from_checkpoint(checkpoints[-1])
trainer.test(model)
+16 -43
View File
@@ -31,26 +31,12 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
WEIGHTS_NAME,
AdamW,
AlbertConfig,
AlbertForTokenClassification,
AlbertTokenizer,
BertConfig,
BertForTokenClassification,
BertTokenizer,
CamembertConfig,
CamembertForTokenClassification,
CamembertTokenizer,
DistilBertConfig,
DistilBertForTokenClassification,
DistilBertTokenizer,
RobertaConfig,
RobertaForTokenClassification,
RobertaTokenizer,
XLMRobertaConfig,
XLMRobertaForTokenClassification,
XLMRobertaTokenizer,
AutoConfig,
AutoModelForTokenClassification,
AutoTokenizer,
get_linear_schedule_with_warmup,
)
from utils_ner import convert_examples_to_features, get_labels, read_examples_from_file
@@ -64,22 +50,10 @@ except ImportError:
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (BertConfig, RobertaConfig, DistilBertConfig, CamembertConfig, XLMRobertaConfig)
),
(),
)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"albert": (AlbertConfig, AlbertForTokenClassification, AlbertTokenizer),
"bert": (BertConfig, BertForTokenClassification, BertTokenizer),
"roberta": (RobertaConfig, RobertaForTokenClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForTokenClassification, DistilBertTokenizer),
"camembert": (CamembertConfig, CamembertForTokenClassification, CamembertTokenizer),
"xlmroberta": (XLMRobertaConfig, XLMRobertaForTokenClassification, XLMRobertaTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), ())
TOKENIZER_ARGS = ["do_lower_case", "strip_accents", "keep_accents", "use_fast"]
@@ -222,8 +196,8 @@ def train(args, train_dataset, model, tokenizer, labels, pad_token_label_id):
else:
torch.nn.utils.clip_grad_norm_(model.parameters(), args.max_grad_norm)
scheduler.step() # Update learning rate schedule
optimizer.step()
scheduler.step() # Update learning rate schedule
model.zero_grad()
global_step += 1
@@ -411,7 +385,7 @@ def main():
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_TYPES),
)
parser.add_argument(
"--model_name_or_path",
@@ -594,8 +568,7 @@ def main():
torch.distributed.barrier() # Make sure only the first process in distributed training will download model & vocab
args.model_type = args.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args.config_name if args.config_name else args.model_name_or_path,
num_labels=num_labels,
id2label={str(i): label for i, label in enumerate(labels)},
@@ -604,12 +577,12 @@ def main():
)
tokenizer_args = {k: v for k, v in vars(args).items() if v is not None and k in TOKENIZER_ARGS}
logger.info("Tokenizer arguments: %s", tokenizer_args)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
cache_dir=args.cache_dir if args.cache_dir else None,
**tokenizer_args,
)
model = model_class.from_pretrained(
model = AutoModelForTokenClassification.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -650,7 +623,7 @@ def main():
# Evaluation
results = {}
if args.do_eval and args.local_rank in [-1, 0]:
tokenizer = tokenizer_class.from_pretrained(args.output_dir, **tokenizer_args)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, **tokenizer_args)
checkpoints = [args.output_dir]
if args.eval_all_checkpoints:
checkpoints = list(
@@ -660,7 +633,7 @@ def main():
logger.info("Evaluate the following checkpoints: %s", checkpoints)
for checkpoint in checkpoints:
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
model = model_class.from_pretrained(checkpoint)
model = AutoModelForTokenClassification.from_pretrained(checkpoint)
model.to(args.device)
result, _ = evaluate(args, model, tokenizer, labels, pad_token_label_id, mode="dev", prefix=global_step)
if global_step:
@@ -672,8 +645,8 @@ def main():
writer.write("{} = {}\n".format(key, str(results[key])))
if args.do_predict and args.local_rank in [-1, 0]:
tokenizer = tokenizer_class.from_pretrained(args.output_dir, **tokenizer_args)
model = model_class.from_pretrained(args.output_dir)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, **tokenizer_args)
model = AutoModelForTokenClassification.from_pretrained(args.output_dir)
model.to(args.device)
result, predictions = evaluate(args, model, tokenizer, labels, pad_token_label_id, mode="test")
# Save results
Regular → Executable
+4 -1
View File
@@ -27,6 +27,9 @@ export CURRENT_DIR=${PWD}
export OUTPUT_DIR=${CURRENT_DIR}/${OUTPUT_DIR_NAME}
mkdir -p $OUTPUT_DIR
# Add parent directory to python path to access transformer_base.py
export PYTHONPATH="../":"${PYTHONPATH}"
python3 run_pl_ner.py --data_dir ./ \
--model_type bert \
--labels ./labels.txt \
@@ -34,7 +37,7 @@ python3 run_pl_ner.py --data_dir ./ \
--output_dir $OUTPUT_DIR \
--max_seq_length $MAX_LENGTH \
--num_train_epochs $NUM_EPOCHS \
--train_batch_size 32 \
--train_batch_size $BATCH_SIZE \
--seed $SEED \
--do_train \
--do_predict
+8 -47
View File
@@ -21,11 +21,13 @@ class NERTransformer(BaseTransformer):
A training module for NER. See BaseTransformer for the core options.
"""
mode = "token-classification"
def __init__(self, hparams):
self.labels = get_labels(hparams.labels)
num_labels = len(self.labels)
self.pad_token_label_id = CrossEntropyLoss().ignore_index
super(NERTransformer, self).__init__(hparams, num_labels)
super(NERTransformer, self).__init__(hparams, num_labels, self.mode)
def forward(self, **inputs):
return self.model(**inputs)
@@ -38,21 +40,11 @@ class NERTransformer(BaseTransformer):
batch[2] if self.hparams.model_type in ["bert", "xlnet"] else None
) # XLM and RoBERTa don"t use segment_ids
outputs = self.forward(**inputs)
outputs = self(**inputs)
loss = outputs[0]
tensorboard_logs = {"loss": loss, "rate": self.lr_scheduler.get_last_lr()[-1]}
return {"loss": loss, "log": tensorboard_logs}
def _feature_file(self, mode):
return os.path.join(
self.hparams.data_dir,
"cached_{}_{}_{}".format(
mode,
list(filter(None, self.hparams.model_name_or_path.split("/"))).pop(),
str(self.hparams.max_seq_length),
),
)
def prepare_data(self):
"Called to initialize data. Use the call to construct features"
args = self.hparams
@@ -100,7 +92,7 @@ class NERTransformer(BaseTransformer):
inputs["token_type_ids"] = (
batch[2] if self.hparams.model_type in ["bert", "xlnet"] else None
) # XLM and RoBERTa don"t use segment_ids
outputs = self.forward(**inputs)
outputs = self(**inputs)
tmp_eval_loss, logits = outputs[:2]
preds = logits.detach().cpu().numpy()
out_label_ids = inputs["labels"].detach().cpu().numpy()
@@ -130,14 +122,8 @@ class NERTransformer(BaseTransformer):
"f1": f1_score(out_label_list, preds_list),
}
if self.is_logger():
logger.info("***** Eval results *****")
for key in sorted(results.keys()):
logger.info(" %s = %s", key, str(results[key]))
tensorboard_logs = results
ret = {k: v for k, v in results.items()}
ret["log"] = tensorboard_logs
ret["log"] = results
return ret, preds_list, out_label_list
def validation_end(self, outputs):
@@ -151,32 +137,7 @@ class NERTransformer(BaseTransformer):
# updating to test_epoch_end instead of deprecated test_end
ret, predictions, targets = self._eval_end(outputs)
if self.is_logger():
# Write output to a file:
# Save results
output_test_results_file = os.path.join(self.hparams.output_dir, "test_results.txt")
with open(output_test_results_file, "w") as writer:
for key in sorted(ret.keys()):
if key != "log":
writer.write("{} = {}\n".format(key, str(ret[key])))
# Save predictions
output_test_predictions_file = os.path.join(self.hparams.output_dir, "test_predictions.txt")
with open(output_test_predictions_file, "w") as writer:
with open(os.path.join(self.hparams.data_dir, "test.txt"), "r") as f:
example_id = 0
for line in f:
if line.startswith("-DOCSTART-") or line == "" or line == "\n":
writer.write(line)
if not predictions[example_id]:
example_id += 1
elif predictions[example_id]:
output_line = line.split()[0] + " " + predictions[example_id].pop(0) + "\n"
writer.write(output_line)
else:
logger.warning(
"Maximum sequence length exceeded: No prediction for '%s'.", line.split()[0]
)
# Converting to the dic required by pl
# Converting to the dict required by pl
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master/\
# pytorch_lightning/trainer/logging.py#L139
logs = ret["log"]
@@ -230,6 +191,6 @@ if __name__ == "__main__":
# pl use this format to create a checkpoint:
# https://github.com/PyTorchLightning/pytorch-lightning/blob/master\
# /pytorch_lightning/callbacks/model_checkpoint.py#L169
checkpoints = list(sorted(glob.glob(args.output_dir + "/checkpointepoch=*.ckpt", recursive=True)))
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpointepoch=*.ckpt"), recursive=True)))
NERTransformer.load_from_checkpoint(checkpoints[-1])
trainer.test(model)
+15 -26
View File
@@ -13,16 +13,11 @@ from seqeval import metrics
from transformers import (
TF2_WEIGHTS_NAME,
BertConfig,
BertTokenizer,
DistilBertConfig,
DistilBertTokenizer,
TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
AutoConfig,
AutoTokenizer,
GradientAccumulator,
RobertaConfig,
RobertaTokenizer,
TFBertForTokenClassification,
TFDistilBertForTokenClassification,
TFRobertaForTokenClassification,
TFAutoModelForTokenClassification,
create_optimizer,
)
from utils_ner import convert_examples_to_features, get_labels, read_examples_from_file
@@ -34,22 +29,17 @@ except ImportError:
from fastprogress.fastprogress import master_bar, progress_bar
ALL_MODELS = sum(
(tuple(conf.pretrained_config_archive_map.keys()) for conf in (BertConfig, RobertaConfig, DistilBertConfig)), ()
)
MODEL_CONFIG_CLASSES = list(TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"bert": (BertConfig, TFBertForTokenClassification, BertTokenizer),
"roberta": (RobertaConfig, TFRobertaForTokenClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, TFDistilBertForTokenClassification, DistilBertTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), (),)
flags.DEFINE_string(
"data_dir", None, "The input data dir. Should contain the .conll files (or other data files) " "for the task."
)
flags.DEFINE_string("model_type", None, "Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()))
flags.DEFINE_string("model_type", None, "Model type selected in the list: " + ", ".join(MODEL_TYPES))
flags.DEFINE_string(
"model_name_or_path",
@@ -509,8 +499,7 @@ def main(_):
labels = get_labels(args["labels"])
num_labels = len(labels) + 1
pad_token_label_id = 0
config_class, model_class, tokenizer_class = MODEL_CLASSES[args["model_type"]]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args["config_name"] if args["config_name"] else args["model_name_or_path"],
num_labels=num_labels,
cache_dir=args["cache_dir"] if args["cache_dir"] else None,
@@ -520,14 +509,14 @@ def main(_):
# Training
if args["do_train"]:
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args["tokenizer_name"] if args["tokenizer_name"] else args["model_name_or_path"],
do_lower_case=args["do_lower_case"],
cache_dir=args["cache_dir"] if args["cache_dir"] else None,
)
with strategy.scope():
model = model_class.from_pretrained(
model = TFAutoModelForTokenClassification.from_pretrained(
args["model_name_or_path"],
from_pt=bool(".bin" in args["model_name_or_path"]),
config=config,
@@ -562,7 +551,7 @@ def main(_):
# Evaluation
if args["do_eval"]:
tokenizer = tokenizer_class.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
tokenizer = AutoTokenizer.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
checkpoints = []
results = []
@@ -584,7 +573,7 @@ def main(_):
global_step = checkpoint.split("-")[-1] if re.match(".*checkpoint-[0-9]", checkpoint) else "final"
with strategy.scope():
model = model_class.from_pretrained(checkpoint)
model = TFAutoModelForTokenClassification.from_pretrained(checkpoint)
y_true, y_pred, eval_loss = evaluate(
args, strategy, model, tokenizer, labels, pad_token_label_id, mode="dev"
@@ -611,8 +600,8 @@ def main(_):
writer.write("\n")
if args["do_predict"]:
tokenizer = tokenizer_class.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
model = model_class.from_pretrained(args["output_dir"])
tokenizer = AutoTokenizer.from_pretrained(args["output_dir"], do_lower_case=args["do_lower_case"])
model = TFAutoModelForTokenClassification.from_pretrained(args["output_dir"])
eval_batch_size = args["per_device_eval_batch_size"] * args["n_device"]
predict_dataset, _ = load_and_cache_examples(
args, tokenizer, labels, pad_token_label_id, eval_batch_size, mode="test"
+1
View File
@@ -2,3 +2,4 @@ tensorboardX
tensorboard
scikit-learn
seqeval
psutil
+20 -60
View File
@@ -30,32 +30,12 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING,
WEIGHTS_NAME,
AdamW,
AlbertConfig,
AlbertForSequenceClassification,
AlbertTokenizer,
BertConfig,
BertForSequenceClassification,
BertTokenizer,
DistilBertConfig,
DistilBertForSequenceClassification,
DistilBertTokenizer,
FlaubertConfig,
FlaubertForSequenceClassification,
FlaubertTokenizer,
RobertaConfig,
RobertaForSequenceClassification,
RobertaTokenizer,
XLMConfig,
XLMForSequenceClassification,
XLMRobertaConfig,
XLMRobertaForSequenceClassification,
XLMRobertaTokenizer,
XLMTokenizer,
XLNetConfig,
XLNetForSequenceClassification,
XLNetTokenizer,
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
get_linear_schedule_with_warmup,
)
from transformers import glue_compute_metrics as compute_metrics
@@ -72,33 +52,10 @@ except ImportError:
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (
BertConfig,
XLNetConfig,
XLMConfig,
RobertaConfig,
DistilBertConfig,
AlbertConfig,
XLMRobertaConfig,
FlaubertConfig,
)
),
(),
)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"bert": (BertConfig, BertForSequenceClassification, BertTokenizer),
"xlnet": (XLNetConfig, XLNetForSequenceClassification, XLNetTokenizer),
"xlm": (XLMConfig, XLMForSequenceClassification, XLMTokenizer),
"roberta": (RobertaConfig, RobertaForSequenceClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForSequenceClassification, DistilBertTokenizer),
"albert": (AlbertConfig, AlbertForSequenceClassification, AlbertTokenizer),
"xlmroberta": (XLMRobertaConfig, XLMRobertaForSequenceClassification, XLMRobertaTokenizer),
"flaubert": (FlaubertConfig, FlaubertForSequenceClassification, FlaubertTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), (),)
def set_seed(args):
@@ -233,7 +190,11 @@ def train(args, train_dataset, model, tokenizer):
loss.backward()
tr_loss += loss.item()
if (step + 1) % args.gradient_accumulation_steps == 0:
if (step + 1) % args.gradient_accumulation_steps == 0 or (
# last step in epoch but step is always smaller than gradient_accumulation_steps
len(epoch_iterator) <= args.gradient_accumulation_steps
and (step + 1) == len(epoch_iterator)
):
if args.fp16:
torch.nn.utils.clip_grad_norm_(amp.master_params(optimizer), args.max_grad_norm)
else:
@@ -438,7 +399,7 @@ def main():
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_TYPES),
)
parser.add_argument(
"--model_name_or_path",
@@ -618,19 +579,18 @@ def main():
torch.distributed.barrier() # Make sure only the first process in distributed training will download model & vocab
args.model_type = args.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args.config_name if args.config_name else args.model_name_or_path,
num_labels=num_labels,
finetuning_task=args.task_name,
cache_dir=args.cache_dir if args.cache_dir else None,
)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
do_lower_case=args.do_lower_case,
cache_dir=args.cache_dir if args.cache_dir else None,
)
model = model_class.from_pretrained(
model = AutoModelForSequenceClassification.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -669,14 +629,14 @@ def main():
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = model_class.from_pretrained(args.output_dir)
tokenizer = tokenizer_class.from_pretrained(args.output_dir)
model = AutoModelForSequenceClassification.from_pretrained(args.output_dir)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir)
model.to(args.device)
# Evaluation
results = {}
if args.do_eval and args.local_rank in [-1, 0]:
tokenizer = tokenizer_class.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
checkpoints = [args.output_dir]
if args.eval_all_checkpoints:
checkpoints = list(
@@ -688,7 +648,7 @@ def main():
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
prefix = checkpoint.split("/")[-1] if checkpoint.find("checkpoint") != -1 else ""
model = model_class.from_pretrained(checkpoint)
model = AutoModelForSequenceClassification.from_pretrained(checkpoint)
model.to(args.device)
result = evaluate(args, model, tokenizer, prefix=prefix)
result = dict((k + "_{}".format(global_step), v) for k, v in result.items())
+23 -40
View File
@@ -38,28 +38,14 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_WITH_LM_HEAD_MAPPING,
WEIGHTS_NAME,
AdamW,
BertConfig,
BertForMaskedLM,
BertTokenizer,
CamembertConfig,
CamembertForMaskedLM,
CamembertTokenizer,
DistilBertConfig,
DistilBertForMaskedLM,
DistilBertTokenizer,
GPT2Config,
GPT2LMHeadModel,
GPT2Tokenizer,
OpenAIGPTConfig,
OpenAIGPTLMHeadModel,
OpenAIGPTTokenizer,
AutoConfig,
AutoModelWithLMHead,
AutoTokenizer,
PreTrainedModel,
PreTrainedTokenizer,
RobertaConfig,
RobertaForMaskedLM,
RobertaTokenizer,
get_linear_schedule_with_warmup,
)
@@ -73,14 +59,8 @@ except ImportError:
logger = logging.getLogger(__name__)
MODEL_CLASSES = {
"gpt2": (GPT2Config, GPT2LMHeadModel, GPT2Tokenizer),
"openai-gpt": (OpenAIGPTConfig, OpenAIGPTLMHeadModel, OpenAIGPTTokenizer),
"bert": (BertConfig, BertForMaskedLM, BertTokenizer),
"roberta": (RobertaConfig, RobertaForMaskedLM, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForMaskedLM, DistilBertTokenizer),
"camembert": (CamembertConfig, CamembertForMaskedLM, CamembertTokenizer),
}
MODEL_CONFIG_CLASSES = list(MODEL_WITH_LM_HEAD_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
class TextDataset(Dataset):
@@ -693,23 +673,26 @@ def main():
if args.local_rank not in [-1, 0]:
torch.distributed.barrier() # Barrier to make sure only the first process in distributed training download model & vocab
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
if args.config_name:
config = config_class.from_pretrained(args.config_name, cache_dir=args.cache_dir)
config = AutoConfig.from_pretrained(args.config_name, cache_dir=args.cache_dir)
elif args.model_name_or_path:
config = config_class.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
config = AutoConfig.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
else:
config = config_class()
# When we release a pip version exposing CONFIG_MAPPING,
# we can do `config = CONFIG_MAPPING[args.model_type]()`.
raise ValueError(
"You are instantiating a new config instance from scratch. This is not supported, but you can do it from another script, save it,"
"and load it from here, using --config_name"
)
if args.tokenizer_name:
tokenizer = tokenizer_class.from_pretrained(args.tokenizer_name, cache_dir=args.cache_dir)
tokenizer = AutoTokenizer.from_pretrained(args.tokenizer_name, cache_dir=args.cache_dir)
elif args.model_name_or_path:
tokenizer = tokenizer_class.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
tokenizer = AutoTokenizer.from_pretrained(args.model_name_or_path, cache_dir=args.cache_dir)
else:
raise ValueError(
"You are instantiating a new {} tokenizer. This is not supported, but you can do it from another script, save it,"
"and load it from here, using --tokenizer_name".format(tokenizer_class.__name__)
"You are instantiating a new tokenizer from scratch. This is not supported, but you can do it from another script, save it,"
"and load it from here, using --tokenizer_name"
)
if args.block_size <= 0:
@@ -719,7 +702,7 @@ def main():
args.block_size = min(args.block_size, tokenizer.max_len)
if args.model_name_or_path:
model = model_class.from_pretrained(
model = AutoModelWithLMHead.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -727,7 +710,7 @@ def main():
)
else:
logger.info("Training new model from scratch")
model = model_class(config=config)
model = AutoModelWithLMHead.from_config(config)
model.to(args.device)
@@ -768,8 +751,8 @@ def main():
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = model_class.from_pretrained(args.output_dir)
tokenizer = tokenizer_class.from_pretrained(args.output_dir)
model = AutoModelWithLMHead.from_pretrained(args.output_dir)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir)
model.to(args.device)
# Evaluation
@@ -786,7 +769,7 @@ def main():
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
prefix = checkpoint.split("/")[-1] if checkpoint.find("checkpoint") != -1 else ""
model = model_class.from_pretrained(checkpoint)
model = AutoModelWithLMHead.from_pretrained(checkpoint)
model.to(args.device)
result = evaluate(args, model, tokenizer, prefix=prefix)
result = dict((k + "_{}".format(global_step), v) for k, v in result.items())
+14 -45
View File
@@ -30,29 +30,12 @@ from torch.utils.data.distributed import DistributedSampler
from tqdm import tqdm, trange
from transformers import (
MODEL_FOR_QUESTION_ANSWERING_MAPPING,
WEIGHTS_NAME,
AdamW,
AlbertConfig,
AlbertForQuestionAnswering,
AlbertTokenizer,
BertConfig,
BertForQuestionAnswering,
BertTokenizer,
CamembertConfig,
CamembertForQuestionAnswering,
CamembertTokenizer,
DistilBertConfig,
DistilBertForQuestionAnswering,
DistilBertTokenizer,
RobertaConfig,
RobertaForQuestionAnswering,
RobertaTokenizer,
XLMConfig,
XLMForQuestionAnswering,
XLMTokenizer,
XLNetConfig,
XLNetForQuestionAnswering,
XLNetTokenizer,
AutoConfig,
AutoModelForQuestionAnswering,
AutoTokenizer,
get_linear_schedule_with_warmup,
squad_convert_examples_to_features,
)
@@ -72,23 +55,10 @@ except ImportError:
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (BertConfig, CamembertConfig, RobertaConfig, XLNetConfig, XLMConfig)
),
(),
)
MODEL_CONFIG_CLASSES = list(MODEL_FOR_QUESTION_ANSWERING_MAPPING.keys())
MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES)
MODEL_CLASSES = {
"bert": (BertConfig, BertForQuestionAnswering, BertTokenizer),
"camembert": (CamembertConfig, CamembertForQuestionAnswering, CamembertTokenizer),
"roberta": (RobertaConfig, RobertaForQuestionAnswering, RobertaTokenizer),
"xlnet": (XLNetConfig, XLNetForQuestionAnswering, XLNetTokenizer),
"xlm": (XLMConfig, XLMForQuestionAnswering, XLMTokenizer),
"distilbert": (DistilBertConfig, DistilBertForQuestionAnswering, DistilBertTokenizer),
"albert": (AlbertConfig, AlbertForQuestionAnswering, AlbertTokenizer),
}
ALL_MODELS = sum((tuple(conf.pretrained_config_archive_map.keys()) for conf in MODEL_CONFIG_CLASSES), (),)
def set_seed(args):
@@ -513,7 +483,7 @@ def main():
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_TYPES),
)
parser.add_argument(
"--model_name_or_path",
@@ -757,17 +727,16 @@ def main():
torch.distributed.barrier()
args.model_type = args.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[args.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
args.config_name if args.config_name else args.model_name_or_path,
cache_dir=args.cache_dir if args.cache_dir else None,
)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
args.tokenizer_name if args.tokenizer_name else args.model_name_or_path,
do_lower_case=args.do_lower_case,
cache_dir=args.cache_dir if args.cache_dir else None,
)
model = model_class.from_pretrained(
model = AutoModelForQuestionAnswering.from_pretrained(
args.model_name_or_path,
from_tf=bool(".ckpt" in args.model_name_or_path),
config=config,
@@ -817,8 +786,8 @@ def main():
torch.save(args, os.path.join(args.output_dir, "training_args.bin"))
# Load a trained model and vocabulary that you have fine-tuned
model = model_class.from_pretrained(args.output_dir) # , force_download=True)
tokenizer = tokenizer_class.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
model = AutoModelForQuestionAnswering.from_pretrained(args.output_dir) # , force_download=True)
tokenizer = AutoTokenizer.from_pretrained(args.output_dir, do_lower_case=args.do_lower_case)
model.to(args.device)
# Evaluation - we can ask to evaluate all the checkpoints (sub-directories) in a directory
@@ -842,7 +811,7 @@ def main():
for checkpoint in checkpoints:
# Reload the model
global_step = checkpoint.split("-")[-1] if len(checkpoints) > 1 else ""
model = model_class.from_pretrained(checkpoint) # , force_download=True)
model = AutoModelForQuestionAnswering.from_pretrained(checkpoint) # , force_download=True)
model.to(args.device)
# Evaluate
+13
View File
@@ -14,6 +14,19 @@ python evaluate_cnn.py <path_to_test.source> cnn_test_summaries.txt
```
the default batch size, 8, fits in 16GB GPU memory, but may need to be adjusted to fit your system.
### Training
After downloading the CNN and Daily Mail datasets, preprocess the dataset:
```commandline
git clone https://github.com/artmatsak/cnn-dailymail
cd cnn-dailymail && python make_datafiles.py ../cnn/stories/ ../dailymail/stories/
```
Run the training script: `run_train.sh`
### Where is the code?
The core model is in `src/transformers/modeling_bart.py`. This directory only contains examples.
+7 -3
View File
@@ -20,6 +20,10 @@ def generate_summaries(lns, out_file, batch_size=8, device=DEFAULT_DEVICE):
fout = Path(out_file).open("w")
model = BartForConditionalGeneration.from_pretrained("bart-large-cnn", output_past=True,).to(device)
tokenizer = BartTokenizer.from_pretrained("bart-large")
max_length = 140
min_length = 55
for batch in tqdm(list(chunks(lns, batch_size))):
dct = tokenizer.batch_encode_plus(batch, max_length=1024, return_tensors="pt", pad_to_max_length=True)
summaries = model.generate(
@@ -27,11 +31,11 @@ def generate_summaries(lns, out_file, batch_size=8, device=DEFAULT_DEVICE):
attention_mask=dct["attention_mask"].to(device),
num_beams=4,
length_penalty=2.0,
max_length=142, # +2 from original because we start at step=1 and stop before max_length
min_length=56, # +1 from original because we start at step=1
max_length=max_length + 2, # +2 from original because we start at step=1 and stop before max_length
min_length=min_length + 1, # +1 from original because we start at step=1
no_repeat_ngram_size=3,
early_stopping=True,
do_sample=False,
decoder_start_token_id=model.config.eos_token_id,
)
dec = [tokenizer.decode(g, skip_special_tokens=True, clean_up_tokenization_spaces=False) for g in summaries]
for hypothesis in dec:
+172
View File
@@ -0,0 +1,172 @@
import argparse
import glob
import logging
import os
import time
import torch
from torch.utils.data import DataLoader
from transformer_base import BaseTransformer, add_generic_args, generic_train, get_linear_schedule_with_warmup
from utils import SummarizationDataset
logger = logging.getLogger(__name__)
class BartSystem(BaseTransformer):
mode = "language-modeling"
def __init__(self, hparams):
super(BartSystem, self).__init__(hparams, num_labels=None, mode=self.mode)
def forward(
self, input_ids, attention_mask=None, decoder_input_ids=None, decoder_attention_mask=None, lm_labels=None
):
return self.model(
input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
lm_labels=lm_labels,
)
def _step(self, batch):
y = batch["target_ids"]
y_ids = y[:, :-1].contiguous()
lm_labels = y[:, 1:].clone()
lm_labels[y[:, 1:] == self.tokenizer.pad_token_id] = -100
outputs = self(
input_ids=batch["source_ids"],
attention_mask=batch["source_mask"],
decoder_input_ids=y_ids,
lm_labels=lm_labels,
)
loss = outputs[0]
return loss
def training_step(self, batch, batch_idx):
loss = self._step(batch)
tensorboard_logs = {"train_loss": loss}
return {"loss": loss, "log": tensorboard_logs}
def validation_step(self, batch, batch_idx):
loss = self._step(batch)
return {"val_loss": loss}
def validation_end(self, outputs):
avg_loss = torch.stack([x["val_loss"] for x in outputs]).mean()
tensorboard_logs = {"val_loss": avg_loss}
return {"avg_val_loss": avg_loss, "log": tensorboard_logs}
def test_step(self, batch, batch_idx):
generated_ids = self.model.generate(
batch["source_ids"],
attention_mask=batch["source_mask"],
num_beams=1,
max_length=80,
repetition_penalty=2.5,
length_penalty=1.0,
early_stopping=True,
)
preds = [
self.tokenizer.decode(g, skip_special_tokens=True, clean_up_tokenization_spaces=True)
for g in generated_ids
]
target = [
self.tokenizer.decode(t, skip_special_tokens=True, clean_up_tokenization_spaces=True)
for t in batch["target_ids"]
]
loss = self._step(batch)
return {"val_loss": loss, "preds": preds, "target": target}
def test_end(self, outputs):
return self.validation_end(outputs)
def test_epoch_end(self, outputs):
output_test_predictions_file = os.path.join(self.hparams.output_dir, "test_predictions.txt")
output_test_targets_file = os.path.join(self.hparams.output_dir, "test_targets.txt")
# write predictions and targets for later rouge evaluation.
with open(output_test_predictions_file, "w+") as p_writer, open(output_test_targets_file, "w+") as t_writer:
for output_batch in outputs:
p_writer.writelines(s + "\n" for s in output_batch["preds"])
t_writer.writelines(s + "\n" for s in output_batch["target"])
p_writer.close()
t_writer.close()
return self.test_end(outputs)
def train_dataloader(self):
train_dataset = SummarizationDataset(
self.tokenizer, data_dir=self.hparams.data_dir, type_path="train", block_size=self.hparams.max_seq_length
)
dataloader = DataLoader(train_dataset, batch_size=self.hparams.train_batch_size)
t_total = (
(len(dataloader.dataset) // (self.hparams.train_batch_size * max(1, self.hparams.n_gpu)))
// self.hparams.gradient_accumulation_steps
* float(self.hparams.num_train_epochs)
)
scheduler = get_linear_schedule_with_warmup(
self.opt, num_warmup_steps=self.hparams.warmup_steps, num_training_steps=t_total
)
self.lr_scheduler = scheduler
return dataloader
def val_dataloader(self):
val_dataset = SummarizationDataset(
self.tokenizer, data_dir=self.hparams.data_dir, type_path="val", block_size=self.hparams.max_seq_length
)
return DataLoader(val_dataset, batch_size=self.hparams.eval_batch_size)
def test_dataloader(self):
test_dataset = SummarizationDataset(
self.tokenizer, data_dir=self.hparams.data_dir, type_path="test", block_size=self.hparams.max_seq_length
)
return DataLoader(test_dataset, batch_size=self.hparams.eval_batch_size)
@staticmethod
def add_model_specific_args(parser, root_dir):
BaseTransformer.add_model_specific_args(parser, root_dir)
# Add BART specific options
parser.add_argument(
"--max_seq_length",
default=1024,
type=int,
help="The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded.",
)
parser.add_argument(
"--data_dir",
default=None,
type=str,
required=True,
help="The input data dir. Should contain the dataset files for the CNN/DM summarization task.",
)
return parser
if __name__ == "__main__":
parser = argparse.ArgumentParser()
add_generic_args(parser, os.getcwd())
parser = BartSystem.add_model_specific_args(parser, os.getcwd())
args = parser.parse_args()
# If output_dir not provided, a folder will be generated in pwd
if args.output_dir is None:
args.output_dir = os.path.join("./results", f"{args.task}_{args.model_type}_{time.strftime('%Y%m%d_%H%M%S')}",)
os.makedirs(args.output_dir)
model = BartSystem(args)
trainer = generic_train(model, args)
# Optionally, predict on dev set and write to output_dir
if args.do_predict:
checkpoints = list(sorted(glob.glob(os.path.join(args.output_dir, "checkpointepoch=*.ckpt"), recursive=True)))
BartSystem.load_from_checkpoint(checkpoints[-1])
trainer.test(model)
+23
View File
@@ -0,0 +1,23 @@
# Install newest ptl.
pip install -U git+http://github.com/PyTorchLightning/pytorch-lightning/
export OUTPUT_DIR_NAME=bart_sum
export CURRENT_DIR=${PWD}
export OUTPUT_DIR=${CURRENT_DIR}/${OUTPUT_DIR_NAME}
# Make output directory if it doesn't exist
mkdir -p $OUTPUT_DIR
# Add parent directory to python path to access transformer_base.py
export PYTHONPATH="../../":"${PYTHONPATH}"
python run_bart_sum.py \
--data_dir=./cnn-dailymail/cnn_dm \
--model_type=bart \
--model_name_or_path=bart-large \
--learning_rate=3e-5 \
--train_batch_size=4 \
--eval_batch_size=4 \
--output_dir=$OUTPUT_DIR \
--do_train
+43
View File
@@ -0,0 +1,43 @@
import os
from torch.utils.data import Dataset
class SummarizationDataset(Dataset):
def __init__(self, tokenizer, data_dir="./cnn-dailymail/cnn_dm/", type_path="train", block_size=1024):
super(SummarizationDataset,).__init__()
self.tokenizer = tokenizer
self.source = []
self.target = []
print("loading " + type_path + " source.")
with open(os.path.join(data_dir, type_path + ".source"), "r") as f:
for text in f.readlines(): # each text is a line and a full story
tokenized = tokenizer.batch_encode_plus(
[text], max_length=block_size, pad_to_max_length=True, return_tensors="pt"
)
self.source.append(tokenized)
f.close()
print("loading " + type_path + " target.")
with open(os.path.join(data_dir, type_path + ".target"), "r") as f:
for text in f.readlines(): # each text is a line and a summary
tokenized = tokenizer.batch_encode_plus(
[text], max_length=56, pad_to_max_length=True, return_tensors="pt"
)
self.target.append(tokenized)
f.close()
def __len__(self):
return len(self.source)
def __getitem__(self, index):
source_ids = self.source[index]["input_ids"].squeeze()
target_ids = self.target[index]["input_ids"].squeeze()
src_mask = self.source[index]["attention_mask"].squeeze() # might need to squeeze
return {"source_ids": source_ids, "source_mask": src_mask, "target_ids": target_ids}
@@ -23,7 +23,7 @@ logger = logging.getLogger(__name__)
BERTABS_FINETUNED_CONFIG_MAP = {
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization-config.json",
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization/config.json",
}
@@ -157,7 +157,7 @@ def convert_bertabs_checkpoints(path_to_checkpoints, dump_path):
# directory structure. We save the state_dict instead.
logging.info("saving the model's state dictionary")
torch.save(
new_model.state_dict(), "bertabs-finetuned-cnndm-extractive-abstractive-summarization-pytorch_model.bin"
new_model.state_dict(), "./bertabs-finetuned-cnndm-extractive-abstractive-summarization/pytorch_model.bin"
)
@@ -34,7 +34,7 @@ from transformers import BertConfig, BertModel, PreTrainedModel
MAX_SIZE = 5000
BERTABS_FINETUNED_MODEL_MAP = {
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization-pytorch_model.bin",
"bertabs-finetuned-cnndm": "https://s3.amazonaws.com/models.huggingface.co/bert/remi/bertabs-finetuned-cnndm-extractive-abstractive-summarization/pytorch_model.bin",
}
@@ -844,7 +844,7 @@ class Translator(object):
dec_out, dec_states = self.model.decoder(decoder_input, src_features, dec_states, step=step)
# Generator forward.
log_probs = self.generator.forward(dec_out.transpose(0, 1).squeeze(0))
log_probs = self.generator(dec_out.transpose(0, 1).squeeze(0))
vocab_size = log_probs.size(-1)
if step < min_length:
@@ -7,43 +7,34 @@ import pytorch_lightning as pl
import torch
from transformers import (
ALL_PRETRAINED_MODEL_ARCHIVE_MAP,
AdamW,
BertConfig,
BertForTokenClassification,
BertTokenizer,
CamembertConfig,
CamembertForTokenClassification,
CamembertTokenizer,
DistilBertConfig,
DistilBertForTokenClassification,
DistilBertTokenizer,
RobertaConfig,
RobertaForTokenClassification,
RobertaTokenizer,
XLMRobertaConfig,
XLMRobertaForTokenClassification,
XLMRobertaTokenizer,
AutoConfig,
AutoModel,
AutoModelForPreTraining,
AutoModelForQuestionAnswering,
AutoModelForSequenceClassification,
AutoModelForTokenClassification,
AutoModelWithLMHead,
AutoTokenizer,
get_linear_schedule_with_warmup,
)
from transformers.modeling_auto import MODEL_MAPPING
logger = logging.getLogger(__name__)
ALL_MODELS = sum(
(
tuple(conf.pretrained_config_archive_map.keys())
for conf in (BertConfig, RobertaConfig, DistilBertConfig, CamembertConfig, XLMRobertaConfig)
),
(),
)
ALL_MODELS = tuple(ALL_PRETRAINED_MODEL_ARCHIVE_MAP)
MODEL_CLASSES = tuple(m.model_type for m in MODEL_MAPPING)
MODEL_CLASSES = {
"bert": (BertConfig, BertForTokenClassification, BertTokenizer),
"roberta": (RobertaConfig, RobertaForTokenClassification, RobertaTokenizer),
"distilbert": (DistilBertConfig, DistilBertForTokenClassification, DistilBertTokenizer),
"camembert": (CamembertConfig, CamembertForTokenClassification, CamembertTokenizer),
"xlmroberta": (XLMRobertaConfig, XLMRobertaForTokenClassification, XLMRobertaTokenizer),
MODEL_MODES = {
"base": AutoModel,
"sequence-classification": AutoModelForSequenceClassification,
"question-answering": AutoModelForQuestionAnswering,
"pretraining": AutoModelForPreTraining,
"token-classification": AutoModelForTokenClassification,
"language-modeling": AutoModelWithLMHead,
}
@@ -56,25 +47,23 @@ def set_seed(args):
class BaseTransformer(pl.LightningModule):
def __init__(self, hparams, num_labels=None):
def __init__(self, hparams, num_labels=None, mode="base"):
"Initialize a model."
super(BaseTransformer, self).__init__()
self.hparams = hparams
self.hparams.model_type = self.hparams.model_type.lower()
config_class, model_class, tokenizer_class = MODEL_CLASSES[self.hparams.model_type]
config = config_class.from_pretrained(
config = AutoConfig.from_pretrained(
self.hparams.config_name if self.hparams.config_name else self.hparams.model_name_or_path,
num_labels=num_labels,
**({"num_labels": num_labels} if num_labels is not None else {}),
cache_dir=self.hparams.cache_dir if self.hparams.cache_dir else None,
)
tokenizer = tokenizer_class.from_pretrained(
tokenizer = AutoTokenizer.from_pretrained(
self.hparams.tokenizer_name if self.hparams.tokenizer_name else self.hparams.model_name_or_path,
do_lower_case=self.hparams.do_lower_case,
cache_dir=self.hparams.cache_dir if self.hparams.cache_dir else None,
)
model = model_class.from_pretrained(
model = MODEL_MODES[mode].from_pretrained(
self.hparams.model_name_or_path,
from_tf=bool(".ckpt" in self.hparams.model_name_or_path),
config=config,
@@ -144,6 +133,16 @@ class BaseTransformer(pl.LightningModule):
def test_dataloader(self):
return self.load_dataset("test", self.hparams.eval_batch_size)
def _feature_file(self, mode):
return os.path.join(
self.hparams.data_dir,
"cached_{}_{}_{}".format(
mode,
list(filter(None, self.hparams.model_name_or_path.split("/"))).pop(),
str(self.hparams.max_seq_length),
),
)
@staticmethod
def add_model_specific_args(parser, root_dir):
parser.add_argument(
@@ -151,7 +150,7 @@ class BaseTransformer(pl.LightningModule):
default=None,
type=str,
required=True,
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES.keys()),
help="Model type selected in the list: " + ", ".join(MODEL_CLASSES),
)
parser.add_argument(
"--model_name_or_path",
@@ -190,6 +189,31 @@ class BaseTransformer(pl.LightningModule):
parser.add_argument("--eval_batch_size", default=32, type=int)
class LoggingCallback(pl.Callback):
def on_validation_end(self, trainer, pl_module):
logger.info("***** Validation results *****")
if pl_module.is_logger():
metrics = trainer.callback_metrics
# Log results
for key in sorted(metrics):
if key not in ["log", "progress_bar"]:
logger.info("{} = {}\n".format(key, str(metrics[key])))
def on_test_end(self, trainer, pl_module):
logger.info("***** Test results *****")
if pl_module.is_logger():
metrics = trainer.callback_metrics
# Log and save results to file
output_test_results_file = os.path.join(pl_module.hparams.output_dir, "test_results.txt")
with open(output_test_results_file, "w") as writer:
for key in sorted(metrics):
if key not in ["log", "progress_bar"]:
logger.info("{} = {}\n".format(key, str(metrics[key])))
writer.write("{} = {}\n".format(key, str(metrics[key])))
def add_generic_args(parser, root_dir):
parser.add_argument(
"--output_dir",
@@ -257,6 +281,7 @@ def generic_train(model, args):
early_stop_callback=False,
gradient_clip_val=args.max_grad_norm,
checkpoint_callback=checkpoint_callback,
callbacks=[LoggingCallback()],
)
if args.fp16:
+3 -1
View File
@@ -320,7 +320,9 @@ def convert_examples_to_features(
else:
text_b = example.question + " " + ending
inputs = tokenizer.encode_plus(text_a, text_b, add_special_tokens=True, max_length=max_length,)
inputs = tokenizer.encode_plus(
text_a, text_b, add_special_tokens=True, max_length=max_length, return_token_type_ids=True
)
if "num_truncated_tokens" in inputs and inputs["num_truncated_tokens"] > 0:
logger.info(
"Attention! you are cropping tokens (swag task is ok). "
@@ -0,0 +1,84 @@
---
language: finnish
---
## Quickstart
**Release 1.0** (November 25, 2019)
Download the models here:
* Cased Finnish BERT Base: [bert-base-finnish-cased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased-v1.zip)
* Uncased Finnish BERT Base: [bert-base-finnish-uncased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased-v1.zip)
We generally recommend the use of the cased model.
Paper presenting Finnish BERT: [arXiv:1912.07076](https://arxiv.org/abs/1912.07076)
## What's this?
A version of Google's [BERT](https://github.com/google-research/bert) deep transfer learning model for Finnish. The model can be fine-tuned to achieve state-of-the-art results for various Finnish natural language processing tasks.
FinBERT features a custom 50,000 wordpiece vocabulary that has much better coverage of Finnish words than e.g. the previously released [multilingual BERT](https://github.com/google-research/bert/blob/master/multilingual.md) models from Google:
| Vocabulary | Example |
|------------|---------|
| FinBERT | Suomessa vaihtuu kesän aikana sekä pääministeri että valtiovarain ##ministeri . |
| Multilingual BERT | Suomessa vai ##htuu kes ##än aikana sekä p ##ää ##minister ##i että valt ##io ##vara ##in ##minister ##i . |
FinBERT has been pre-trained for 1 million steps on over 3 billion tokens (24B characters) of Finnish text drawn from news, online discussion, and internet crawls. By contrast, Multilingual BERT was trained on Wikipedia texts, where the Finnish Wikipedia text is approximately 3% of the amount used to train FinBERT.
These features allow FinBERT to outperform not only Multilingual BERT but also all previously proposed models when fine-tuned for Finnish natural language processing tasks.
## Results
### Document classification
![learning curves for Yle and Ylilauta document classification](https://raw.githubusercontent.com/TurkuNLP/FinBERT/master/img/yle-ylilauta-curves.png)
FinBERT outperforms multilingual BERT (M-BERT) on document classification over a range of training set sizes on the Yle news (left) and Ylilauta online discussion (right) corpora. (Baseline classification performance with [FastText](https://fasttext.cc/) included for reference.)
[[code](https://github.com/spyysalo/finbert-text-classification)][[Yle data](https://github.com/spyysalo/yle-corpus)] [[Ylilauta data](https://github.com/spyysalo/ylilauta-corpus)]
### Named Entity Recognition
Evaluation on FiNER corpus ([Ruokolainen et al 2019](https://arxiv.org/abs/1908.04212))
| Model | Accuracy |
|--------------------|----------|
| **FinBERT** | **92.40%** |
| Multilingual BERT | 90.29% |
| [FiNER-tagger](https://github.com/Traubert/FiNer-rules) (rule-based) | 86.82% |
(FiNER tagger results from [Ruokolainen et al. 2019](https://arxiv.org/pdf/1908.04212.pdf))
[[code](https://github.com/jouniluoma/keras-bert-ner)][[data](https://github.com/mpsilfve/finer-data)]
### Part of speech tagging
Evaluation on three Finnish corpora annotated with [Universal Dependencies](https://universaldependencies.org/) part-of-speech tags: the Turku Dependency Treebank (TDT), FinnTreeBank (FTB), and Parallel UD treebank (PUD)
| Model | TDT | FTB | PUD |
|-------------------|-------------|-------------|-------------|
| **FinBERT** | **98.23%** | **98.39%** | **98.08%** |
| Multilingual BERT | 96.97% | 95.87% | 97.58% |
[[code](https://github.com/spyysalo/bert-pos)][[data](http://hdl.handle.net/11234/1-2837)]
## Use with PyTorch
If you want to use the model with the huggingface/transformers library, follow the steps in [huggingface_transformers.md](https://github.com/TurkuNLP/FinBERT/blob/master/huggingface_transformers.md)
## Previous releases
### Release 0.2
**October 24, 2019** Beta version of the BERT base uncased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-uncased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased.zip)
### Release 0.1
**September 30, 2019** We release a beta version of the BERT base cased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-cased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased.zip)
@@ -0,0 +1,84 @@
---
language: finnish
---
## Quickstart
**Release 1.0** (November 25, 2019)
Download the models here:
* Cased Finnish BERT Base: [bert-base-finnish-cased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased-v1.zip)
* Uncased Finnish BERT Base: [bert-base-finnish-uncased-v1.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased-v1.zip)
We generally recommend the use of the cased model.
Paper presenting Finnish BERT: [arXiv:1912.07076](https://arxiv.org/abs/1912.07076)
## What's this?
A version of Google's [BERT](https://github.com/google-research/bert) deep transfer learning model for Finnish. The model can be fine-tuned to achieve state-of-the-art results for various Finnish natural language processing tasks.
FinBERT features a custom 50,000 wordpiece vocabulary that has much better coverage of Finnish words than e.g. the previously released [multilingual BERT](https://github.com/google-research/bert/blob/master/multilingual.md) models from Google:
| Vocabulary | Example |
|------------|---------|
| FinBERT | Suomessa vaihtuu kesän aikana sekä pääministeri että valtiovarain ##ministeri . |
| Multilingual BERT | Suomessa vai ##htuu kes ##än aikana sekä p ##ää ##minister ##i että valt ##io ##vara ##in ##minister ##i . |
FinBERT has been pre-trained for 1 million steps on over 3 billion tokens (24B characters) of Finnish text drawn from news, online discussion, and internet crawls. By contrast, Multilingual BERT was trained on Wikipedia texts, where the Finnish Wikipedia text is approximately 3% of the amount used to train FinBERT.
These features allow FinBERT to outperform not only Multilingual BERT but also all previously proposed models when fine-tuned for Finnish natural language processing tasks.
## Results
### Document classification
![learning curves for Yle and Ylilauta document classification](https://raw.githubusercontent.com/TurkuNLP/FinBERT/master/img/yle-ylilauta-curves.png)
FinBERT outperforms multilingual BERT (M-BERT) on document classification over a range of training set sizes on the Yle news (left) and Ylilauta online discussion (right) corpora. (Baseline classification performance with [FastText](https://fasttext.cc/) included for reference.)
[[code](https://github.com/spyysalo/finbert-text-classification)][[Yle data](https://github.com/spyysalo/yle-corpus)] [[Ylilauta data](https://github.com/spyysalo/ylilauta-corpus)]
### Named Entity Recognition
Evaluation on FiNER corpus ([Ruokolainen et al 2019](https://arxiv.org/abs/1908.04212))
| Model | Accuracy |
|--------------------|----------|
| **FinBERT** | **92.40%** |
| Multilingual BERT | 90.29% |
| [FiNER-tagger](https://github.com/Traubert/FiNer-rules) (rule-based) | 86.82% |
(FiNER tagger results from [Ruokolainen et al. 2019](https://arxiv.org/pdf/1908.04212.pdf))
[[code](https://github.com/jouniluoma/keras-bert-ner)][[data](https://github.com/mpsilfve/finer-data)]
### Part of speech tagging
Evaluation on three Finnish corpora annotated with [Universal Dependencies](https://universaldependencies.org/) part-of-speech tags: the Turku Dependency Treebank (TDT), FinnTreeBank (FTB), and Parallel UD treebank (PUD)
| Model | TDT | FTB | PUD |
|-------------------|-------------|-------------|-------------|
| **FinBERT** | **98.23%** | **98.39%** | **98.08%** |
| Multilingual BERT | 96.97% | 95.87% | 97.58% |
[[code](https://github.com/spyysalo/bert-pos)][[data](http://hdl.handle.net/11234/1-2837)]
## Use with PyTorch
If you want to use the model with the huggingface/transformers library, follow the steps in [huggingface_transformers.md](https://github.com/TurkuNLP/FinBERT/blob/master/huggingface_transformers.md)
## Previous releases
### Release 0.2
**October 24, 2019** Beta version of the BERT base uncased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-uncased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-uncased.zip)
### Release 0.1
**September 30, 2019** We release a beta version of the BERT base cased model trained from scratch on a corpus of Finnish news, online discussions, and crawled data.
Download the model here: [bert-base-finnish-cased.zip](http://dl.turkunlp.org/finbert/bert-base-finnish-cased.zip)
@@ -0,0 +1,26 @@
# SciBERT
This is the pretrained model presented in [SciBERT: A Pretrained Language Model for Scientific Text](https://www.aclweb.org/anthology/D19-1371/), which is a BERT model trained on scientific text.
The training corpus was papers taken from [Semantic Scholar](https://www.semanticscholar.org). Corpus size is 1.14M papers, 3.1B tokens. We use the full text of the papers in training, not just abstracts.
SciBERT has its own wordpiece vocabulary (scivocab) that's built to best match the training corpus. We trained cased and uncased versions.
Available models include:
* `scibert_scivocab_cased`
* `scibert_scivocab_uncased`
The original repo can be found [here](https://github.com/allenai/scibert).
If using these models, please cite the following paper:
```
@inproceedings{beltagy-etal-2019-scibert,
title = "SciBERT: A Pretrained Language Model for Scientific Text",
author = "Beltagy, Iz and Lo, Kyle and Cohan, Arman",
booktitle = "EMNLP",
year = "2019",
publisher = "Association for Computational Linguistics",
url = "https://www.aclweb.org/anthology/D19-1371"
}
```
@@ -0,0 +1,26 @@
# SciBERT
This is the pretrained model presented in [SciBERT: A Pretrained Language Model for Scientific Text](https://www.aclweb.org/anthology/D19-1371/), which is a BERT model trained on scientific text.
The training corpus was papers taken from [Semantic Scholar](https://www.semanticscholar.org). Corpus size is 1.14M papers, 3.1B tokens. We use the full text of the papers in training, not just abstracts.
SciBERT has its own wordpiece vocabulary (scivocab) that's built to best match the training corpus. We trained cased and uncased versions.
Available models include:
* `scibert_scivocab_cased`
* `scibert_scivocab_uncased`
The original repo can be found [here](https://github.com/allenai/scibert).
If using these models, please cite the following paper:
```
@inproceedings{beltagy-etal-2019-scibert,
title = "SciBERT: A Pretrained Language Model for Scientific Text",
author = "Beltagy, Iz and Lo, Kyle and Cohan, Arman",
booktitle = "EMNLP",
year = "2019",
publisher = "Association for Computational Linguistics",
url = "https://www.aclweb.org/anthology/D19-1371"
}
```
+9
View File
@@ -0,0 +1,9 @@
# CamemBERT
CamemBERT is a state-of-the-art language model for French based on the RoBERTa architecture pretrained on the French subcorpus of the newly available multilingual corpus OSCAR.
CamemBERT was originally evaluated on four different downstream tasks for French: part-of-speech (POS) tagging, dependency parsing, named entity recognition (NER) and natural language inference (NLI); improving the state of the art for most tasks over previous monolingual and multilingual approaches, which confirms the effectiveness of large pretrained language models for French.
CamemBERT was trained and evaluated by Louis Martin, Benjamin Muller, Pedro Javier Ortiz Suárez, Yoann Dupont, Laurent Romary, Éric Villemonte de la Clergerie, Djamé Seddah and Benoît Sagot.
Preprint can be found [CamemBERT: a Tasty French Language Model](https://arxiv.org/abs/1911.03894)
@@ -0,0 +1,31 @@
## albert_chinese_small
### Overview
**Language model:** albert-small
**Model size:** 18.5M
**Language:** Chinese
**Training data:** [CLUECorpusSmall](https://github.com/CLUEbenchmark/CLUECorpus2020)
**Eval data:** [CLUE dataset](https://github.com/CLUEbenchmark/CLUE)
### Results
For results on downstream tasks like text classification, please refer to [this repository](https://github.com/CLUEbenchmark/CLUE).
### Usage
**NOTE:**Since sentencepiece is not used in `albert_chinese_small` model, you have to call **BertTokenizer** instead of AlbertTokenizer !!!
```
import torch
from transformers import BertTokenizer, AlbertModel
tokenizer = BertTokenizer.from_pretrained("clue/albert_chinese_small")
albert = AlbertModel.from_pretrained("clue/albert_chinese_small")
```
### About CLUE benchmark
Organization of Language Understanding Evaluation benchmark for Chinese: tasks & datasets, baselines, pre-trained Chinese models, corpus and leaderboard.
Github: https://github.com/CLUEbenchmark
Website: https://www.cluebenchmarks.com/
@@ -0,0 +1,31 @@
## albert_chinese_tiny
### Overview
**Language model:** albert-tiny
**Model size:** 16M
**Language:** Chinese
**Training data:** [CLUECorpusSmall](https://github.com/CLUEbenchmark/CLUECorpus2020)
**Eval data:** [CLUE dataset](https://github.com/CLUEbenchmark/CLUE)
### Results
For results on downstream tasks like text classification, please refer to [this repository](https://github.com/CLUEbenchmark/CLUE).
### Usage
**NOTE:**Since sentencepiece is not used in `albert_chinese_tiny` model, you have to call **BertTokenizer** instead of AlbertTokenizer !!!
```
import torch
from transformers import BertTokenizer, AlbertModel
tokenizer = BertTokenizer.from_pretrained("clue/albert_chinese_tiny")
albert = AlbertModel.from_pretrained("clue/albert_chinese_tiny")
```
### About CLUE benchmark
Organization of Language Understanding Evaluation benchmark for Chinese: tasks & datasets, baselines, pre-trained Chinese models, corpus and leaderboard.
Github: https://github.com/CLUEbenchmark
Website: https://www.cluebenchmarks.com/
@@ -0,0 +1,39 @@
# Introduction
This model was trained on TPU and the details are as follows:
## Model
##
| Model_name | params | size | Training_corpus | Vocab |
| :------------------------------------------ | :----- | :------- | :----------------- | :-----------: |
| **`RoBERTa-tiny-clue`** <br/>Super_small_model | 7.5M | 28.3M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-tiny-pair`** <br/>Super_small_sentence_pair_model | 7.5M | 28.3M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-tiny3L768-clue`** <br/>small_model | 38M | 110M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-tiny3L312-clue`** <br/>small_model | <7.5M | 24M | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-large-clue`** <br/> Large_model | 290M | 1.20G | **CLUECorpus2020** | **CLUEVocab** |
| **`RoBERTa-large-pair`** <br/>Large_sentence_pair_model | 290M | 1.20G | **CLUECorpus2020** | **CLUEVocab** |
### Usage
With the help of[Huggingface-Transformers 2.5.1](https://github.com/huggingface/transformers), you could use these model as follows
```
tokenizer = BertTokenizer.from_pretrained("MODEL_NAME")
model = BertModel.from_pretrained("MODEL_NAME")
```
`MODEL_NAME`:
| Model_NAME | MODEL_LINK |
| -------------------------- | ------------------------------------------------------------ |
| **RoBERTa-tiny-clue** | [`clue/roberta_chinese_clue_tiny`](https://huggingface.co/clue/roberta_chinese_clue_tiny) |
| **RoBERTa-tiny-pair** | [`clue/roberta_chinese_pair_tiny`](https://huggingface.co/clue/roberta_chinese_pair_tiny) |
| **RoBERTa-tiny3L768-clue** | [`clue/roberta_chinese_3L768_clue_tiny`](https://huggingface.co/clue/roberta_chinese_3L768_clue_tiny) |
| **RoBERTa-tiny3L312-clue** | [`clue/roberta_chinese_3L312_clue_tiny`](https://huggingface.co/clue/roberta_chinese_3L312_clue_tiny) |
| **RoBERTa-large-clue** | [`clue/roberta_chinese_clue_large`](https://huggingface.co/clue/roberta_chinese_clue_large) |
| **RoBERTa-large-pair** | [`clue/roberta_chinese_pair_large`](https://huggingface.co/clue/roberta_chinese_pair_large) |
## Details
Please read <a href='https://arxiv.org/pdf/2003.01355'>https://arxiv.org/pdf/2003.01355.
Please visit our repository: https://github.com/CLUEbenchmark/CLUEPretrainedModels.git
@@ -0,0 +1,31 @@
## roberta_chinese_base
### Overview
**Language model:** roberta-base
**Model size:** 392M
**Language:** Chinese
**Training data:** [CLUECorpusSmall](https://github.com/CLUEbenchmark/CLUECorpus2020)
**Eval data:** [CLUE dataset](https://github.com/CLUEbenchmark/CLUE)
### Results
For results on downstream tasks like text classification, please refer to [this repository](https://github.com/CLUEbenchmark/CLUE).
### Usage
**NOTE:** You have to call **BertTokenizer** instead of RobertaTokenizer !!!
```
import torch
from transformers import BertTokenizer, BertModel
tokenizer = BertTokenizer.from_pretrained("clue/roberta_chinese_base")
roberta = BertModel.from_pretrained("clue/roberta_chinese_base")
```
### About CLUE benchmark
Organization of Language Understanding Evaluation benchmark for Chinese: tasks & datasets, baselines, pre-trained Chinese models, corpus and leaderboard.
Github: https://github.com/CLUEbenchmark
Website: https://www.cluebenchmarks.com/
@@ -0,0 +1,76 @@
---
language: turkish
---
# 🤗 + 📚 dbmdz Turkish BERT model
In this repository the MDZ Digital Library team (dbmdz) at the Bavarian State
Library open sources a cased model for Turkish 🎉
# 🇹🇷 BERTurk
BERTurk is a community-driven cased BERT model for Turkish.
Some datasets used for pretraining and evaluation are contributed from the
awesome Turkish NLP community, as well as the decision for the model name: BERTurk.
## Stats
The current version of the model is trained on a filtered and sentence
segmented version of the Turkish [OSCAR corpus](https://traces1.inria.fr/oscar/),
a recent Wikipedia dump, various [OPUS corpora](http://opus.nlpl.eu/) and a
special corpus provided by [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/).
The final training corpus has a size of 35GB and 44,04,976,662 tokens.
Thanks to Google's TensorFlow Research Cloud (TFRC) we could train a cased model
on a TPU v3-8 for 2M steps.
For this model we use a vocab size of 128k.
## Model weights
Currently only PyTorch-[Transformers](https://github.com/huggingface/transformers)
compatible weights are available. If you need access to TensorFlow checkpoints,
please raise an issue!
| Model | Downloads
| ------------------------------------ | ---------------------------------------------------------------------------------------------------------------
| `dbmdz/bert-base-turkish-128k-cased` | [`config.json`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-cased/config.json) • [`pytorch_model.bin`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-cased/pytorch_model.bin) • [`vocab.txt`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-cased/vocab.txt)
## Usage
With Transformers >= 2.3 our BERTurk cased model can be loaded like:
```python
from transformers import AutoModel, AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("dbmdz/bert-base-turkish-128k-cased")
model = AutoModel.from_pretrained("dbmdz/bert-base-turkish-128k-cased")
```
## Results
For results on PoS tagging or NER tasks, please refer to
[this repository](https://github.com/stefan-it/turkish-bert).
# Huggingface model hub
All models are available on the [Huggingface model hub](https://huggingface.co/dbmdz).
# Contact (Bugs, Feedback, Contribution and more)
For questions about our BERT models just open an issue
[here](https://github.com/dbmdz/berts/issues/new) 🤗
# Acknowledgments
Thanks to [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/) for providing us
additional large corpora for Turkish. Many thanks to Reyyan Yeniterzi for providing
us the Turkish NER dataset for evaluation.
Research supported with Cloud TPUs from Google's TensorFlow Research Cloud (TFRC).
Thanks for providing access to the TFRC ❤️
Thanks to the generous support from the [Hugging Face](https://huggingface.co/) team,
it is possible to download both cased and uncased models from their S3 storage 🤗
@@ -0,0 +1,76 @@
---
language: turkish
---
# 🤗 + 📚 dbmdz Turkish BERT model
In this repository the MDZ Digital Library team (dbmdz) at the Bavarian State
Library open sources an uncased model for Turkish 🎉
# 🇹🇷 BERTurk
BERTurk is a community-driven uncased BERT model for Turkish.
Some datasets used for pretraining and evaluation are contributed from the
awesome Turkish NLP community, as well as the decision for the model name: BERTurk.
## Stats
The current version of the model is trained on a filtered and sentence
segmented version of the Turkish [OSCAR corpus](https://traces1.inria.fr/oscar/),
a recent Wikipedia dump, various [OPUS corpora](http://opus.nlpl.eu/) and a
special corpus provided by [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/).
The final training corpus has a size of 35GB and 44,04,976,662 tokens.
Thanks to Google's TensorFlow Research Cloud (TFRC) we could train an uncased model
on a TPU v3-8 for 2M steps.
For this model we use a vocab size of 128k.
## Model weights
Currently only PyTorch-[Transformers](https://github.com/huggingface/transformers)
compatible weights are available. If you need access to TensorFlow checkpoints,
please raise an issue!
| Model | Downloads
| -------------------------------------- | ---------------------------------------------------------------------------------------------------------------
| `dbmdz/bert-base-turkish-128k-uncased` | [`config.json`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-uncased/config.json) • [`pytorch_model.bin`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-uncased/pytorch_model.bin) • [`vocab.txt`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-128k-uncased/vocab.txt)
## Usage
With Transformers >= 2.3 our BERTurk uncased model can be loaded like:
```python
from transformers import AutoModel, AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("dbmdz/bert-base-turkish-128k-uncased")
model = AutoModel.from_pretrained("dbmdz/bert-base-turkish-128k-uncased")
```
## Results
For results on PoS tagging or NER tasks, please refer to
[this repository](https://github.com/stefan-it/turkish-bert).
# Huggingface model hub
All models are available on the [Huggingface model hub](https://huggingface.co/dbmdz).
# Contact (Bugs, Feedback, Contribution and more)
For questions about our BERT models just open an issue
[here](https://github.com/dbmdz/berts/issues/new) 🤗
# Acknowledgments
Thanks to [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/) for providing us
additional large corpora for Turkish. Many thanks to Reyyan Yeniterzi for providing
us the Turkish NER dataset for evaluation.
Research supported with Cloud TPUs from Google's TensorFlow Research Cloud (TFRC).
Thanks for providing access to the TFRC ❤️
Thanks to the generous support from the [Hugging Face](https://huggingface.co/) team,
it is possible to download both cased and uncased models from their S3 storage 🤗
@@ -0,0 +1,74 @@
---
language: turkish
---
# 🤗 + 📚 dbmdz Turkish BERT model
In this repository the MDZ Digital Library team (dbmdz) at the Bavarian State
Library open sources an uncased model for Turkish 🎉
# 🇹🇷 BERTurk
BERTurk is a community-driven uncased BERT model for Turkish.
Some datasets used for pretraining and evaluation are contributed from the
awesome Turkish NLP community, as well as the decision for the model name: BERTurk.
## Stats
The current version of the model is trained on a filtered and sentence
segmented version of the Turkish [OSCAR corpus](https://traces1.inria.fr/oscar/),
a recent Wikipedia dump, various [OPUS corpora](http://opus.nlpl.eu/) and a
special corpus provided by [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/).
The final training corpus has a size of 35GB and 44,04,976,662 tokens.
Thanks to Google's TensorFlow Research Cloud (TFRC) we could train an uncased model
on a TPU v3-8 for 2M steps.
## Model weights
Currently only PyTorch-[Transformers](https://github.com/huggingface/transformers)
compatible weights are available. If you need access to TensorFlow checkpoints,
please raise an issue!
| Model | Downloads
| --------------------------------- | ---------------------------------------------------------------------------------------------------------------
| `dbmdz/bert-base-turkish-uncased` | [`config.json`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-uncased/config.json) • [`pytorch_model.bin`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-uncased/pytorch_model.bin) • [`vocab.txt`](https://cdn.huggingface.co/dbmdz/bert-base-turkish-uncased/vocab.txt)
## Usage
With Transformers >= 2.3 our BERTurk uncased model can be loaded like:
```python
from transformers import AutoModel, AutoTokenizer
tokenizer = AutoTokenizer.from_pretrained("dbmdz/bert-base-turkish-uncased")
model = AutoModel.from_pretrained("dbmdz/bert-base-turkish-uncased")
```
## Results
For results on PoS tagging or NER tasks, please refer to
[this repository](https://github.com/stefan-it/turkish-bert).
# Huggingface model hub
All models are available on the [Huggingface model hub](https://huggingface.co/dbmdz).
# Contact (Bugs, Feedback, Contribution and more)
For questions about our BERT models just open an issue
[here](https://github.com/dbmdz/berts/issues/new) 🤗
# Acknowledgments
Thanks to [Kemal Oflazer](http://www.andrew.cmu.edu/user/ko/) for providing us
additional large corpora for Turkish. Many thanks to Reyyan Yeniterzi for providing
us the Turkish NER dataset for evaluation.
Research supported with Cloud TPUs from Google's TensorFlow Research Cloud (TFRC).
Thanks for providing access to the TFRC ❤️
Thanks to the generous support from the [Hugging Face](https://huggingface.co/) team,
it is possible to download both cased and uncased models from their S3 storage 🤗
@@ -0,0 +1 @@
This is an upload of the bert-base-nli-stsb-mean-tokens pretrained model from the Sentence Transformers Repo (https://github.com/UKPLab/sentence-transformers)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 78.94044093451794,
"f1": 81.7724930324639,
"total": 6078,
"HasAns_exact": 76.28865979381443,
"HasAns_f1": 82.20385314478195,
"HasAns_total": 2910,
"NoAns_exact": 81.37626262626263,
"NoAns_f1": 81.37626262626263,
"NoAns_total": 3168,
"best_exact": 78.95689371503784,
"best_exact_thresh": 0.0,
"best_f1": 81.78894581298378,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "albert-base-v2",
"model_type": "albert",
"num_train_epochs": 3,
"per_gpu_train_batch_size": 8,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 8,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 79.2694965449161,
"f1": 82.50844352970152,
"total": 6078,
"HasAns_exact": 74.87972508591065,
"HasAns_f1": 81.64478342732858,
"HasAns_total": 2910,
"NoAns_exact": 83.30176767676768,
"NoAns_f1": 83.30176767676768,
"NoAns_total": 3168,
"best_exact": 79.2694965449161,
"best_exact_thresh": 0.0,
"best_f1": 82.50844352970155,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 1,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "albert-large-v2",
"model_type": "albert",
"num_train_epochs": 5,
"per_gpu_train_batch_size": 8,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 8,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 85.93287265547877,
"f1": 88.91258331187983,
"total": 6078,
"HasAns_exact": 84.36426116838489,
"HasAns_f1": 90.58786301361013,
"HasAns_total": 2910,
"NoAns_exact": 87.37373737373737,
"NoAns_f1": 87.37373737373737,
"NoAns_total": 3168,
"best_exact": 85.93287265547877,
"best_exact_thresh": 0.0,
"best_f1": 88.91258331187993,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 512,
"model_name_or_path": "albert-xxlarge-v1",
"model_type": "albert",
"num_train_epochs": 4,
"per_gpu_train_batch_size": 1,
"save_steps": 1000,
"seed": 42,
"train_batch_size": 1,
"version_2_with_negative": true,
"warmup_steps": 814,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 65.16946363935504,
"f1": 67.87348075352251,
"total": 6078,
"HasAns_exact": 69.51890034364261,
"HasAns_f1": 75.16667217179045,
"HasAns_total": 2910,
"NoAns_exact": 61.17424242424242,
"NoAns_f1": 61.17424242424242,
"NoAns_total": 3168,
"best_exact": 65.16946363935504,
"best_exact_thresh": 0.0,
"best_f1": 67.87348075352243,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "distilbert-base-uncased-distilled-squad",
"model_type": "distilbert",
"num_train_epochs": 4,
"per_gpu_train_batch_size": 32,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 32,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-roberta-base](https://huggingface.co/elgeish/cs224n-squad2.0-roberta-base)
@@ -0,0 +1,74 @@
## CS224n SQuAD2.0 Project Dataset
The goal of this model is to save CS224n students GPU time when establising
baselines to beat for the [Default Final Project](http://web.stanford.edu/class/cs224n/project/default-final-project-handout.pdf).
The training set used to fine-tune this model is the same as
the [official one](https://rajpurkar.github.io/SQuAD-explorer/); however,
evaluation and model selection were performed using roughly half of the official
dev set, 6078 examples, picked at random. The data files can be found at
<https://github.com/elgeish/squad/tree/master/data> — this is the Winter 2020
version. Given that the official SQuAD2.0 dev set contains the project's test
set, students must make sure not to use the official SQuAD2.0 dev set in any way
— including the use of models fine-tuned on the official SQuAD2.0, since they
used the official SQuAD2.0 dev set for model selection.
## Results
```json
{
"exact": 75.32082922013821,
"f1": 78.66699523704254,
"total": 6078,
"HasAns_exact": 74.84536082474227,
"HasAns_f1": 81.83436324767868,
"HasAns_total": 2910,
"NoAns_exact": 75.75757575757575,
"NoAns_f1": 75.75757575757575,
"NoAns_total": 3168,
"best_exact": 75.32082922013821,
"best_exact_thresh": 0.0,
"best_f1": 78.66699523704266,
"best_f1_thresh": 0.0
}
```
## Notable Arguments
```json
{
"do_lower_case": true,
"doc_stride": 128,
"fp16": false,
"fp16_opt_level": "O1",
"gradient_accumulation_steps": 24,
"learning_rate": 3e-05,
"max_answer_length": 30,
"max_grad_norm": 1,
"max_query_length": 64,
"max_seq_length": 384,
"model_name_or_path": "roberta-base",
"model_type": "roberta",
"num_train_epochs": 4,
"per_gpu_train_batch_size": 16,
"save_steps": 5000,
"seed": 42,
"train_batch_size": 16,
"version_2_with_negative": true,
"warmup_steps": 0,
"weight_decay": 0
}
```
## Environment Setup
```json
{
"transformers": "2.5.1",
"pytorch": "1.4.0=py3.6_cuda10.1.243_cudnn7.6.3_0",
"python": "3.6.5=hc3d631a_2",
"os": "Linux 4.15.0-1060-aws #62-Ubuntu SMP Tue Feb 11 21:23:22 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux",
"gpu": "Tesla V100-SXM2-16GB"
}
```
## Related Models
* [elgeish/cs224n-squad2.0-albert-base-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-base-v2)
* [elgeish/cs224n-squad2.0-albert-large-v2](https://huggingface.co/elgeish/cs224n-squad2.0-albert-large-v2)
* [elgeish/cs224n-squad2.0-albert-xxlarge-v1](https://huggingface.co/elgeish/cs224n-squad2.0-albert-xxlarge-v1)
* [elgeish/cs224n-squad2.0-distilbert-base-uncased](https://huggingface.co/elgeish/cs224n-squad2.0-distilbert-base-uncased)
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# BioBERT-NLI
This is the model [BioBERT](https://github.com/dmis-lab/biobert) [1] fine-tuned on the [SNLI](https://nlp.stanford.edu/projects/snli/) and the [MultiNLI](https://www.nyu.edu/projects/bowman/multinli/) datasets using the [`sentence-transformers` library](https://github.com/UKPLab/sentence-transformers/) to produce universal sentence embeddings [2].
The model uses the original BERT wordpiece vocabulary and was trained using the **average pooling strategy** and a **softmax loss**.
**Base model**: `monologg/biobert_v1.1_pubmed` from HuggingFace's `AutoModel`.
**Training time**: ~6 hours on the NVIDIA Tesla P100 GPU provided in Kaggle Notebooks.
**Parameters**:
| Parameter | Value |
|------------------|-------|
| Batch size | 64 |
| Training steps | 30000 |
| Warmup steps | 1450 |
| Lowercasing | False |
| Max. Seq. Length | 128 |
**Performances**: The performance was evaluated on the test portion of the [STS dataset](http://ixa2.si.ehu.es/stswiki/index.php/STSbenchmark) using Spearman rank correlation and compared to the performances of a general BERT base model obtained with the same procedure to verify their similarity.
| Model | Score |
|-------------------------------|-------------|
| `biobert-nli` (this) | 73.40 |
| `gsarti/scibert-nli` | 74.50 |
| `bert-base-nli-mean-tokens`[3]| 77.12 |
An example usage for similarity-based scientific paper retrieval is provided in the [Covid Papers Browser](https://github.com/gsarti/covid-papers-browser) repository.
**References:**
[1] J. Lee et al, [BioBERT: a pre-trained biomedical language representation model for biomedical text mining](https://academic.oup.com/bioinformatics/article/36/4/1234/5566506)
[2] A. Conneau et al., [Supervised Learning of Universal Sentence Representations from Natural Language Inference Data](https://www.aclweb.org/anthology/D17-1070/)
[3] N. Reimers et I. Gurevych, [Sentence-BERT: Sentence Embeddings using Siamese BERT-Networks](https://www.aclweb.org/anthology/D19-1410/)
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# SciBERT-NLI
This is the model [SciBERT](https://github.com/allenai/scibert) [1] fine-tuned on the [SNLI](https://nlp.stanford.edu/projects/snli/) and the [MultiNLI](https://www.nyu.edu/projects/bowman/multinli/) datasets using the [`sentence-transformers` library](https://github.com/UKPLab/sentence-transformers/) to produce universal sentence embeddings [2].
The model uses the original `scivocab` wordpiece vocabulary and was trained using the **average pooling strategy** and a **softmax loss**.
**Base model**: `allenai/scibert-scivocab-cased` from HuggingFace's `AutoModel`.
**Training time**: ~4 hours on the NVIDIA Tesla P100 GPU provided in Kaggle Notebooks.
**Parameters**:
| Parameter | Value |
|------------------|-------|
| Batch size | 64 |
| Training steps | 20000 |
| Warmup steps | 1450 |
| Lowercasing | True |
| Max. Seq. Length | 128 |
**Performances**: The performance was evaluated on the test portion of the [STS dataset](http://ixa2.si.ehu.es/stswiki/index.php/STSbenchmark) using Spearman rank correlation and compared to the performances of a general BERT base model obtained with the same procedure to verify their similarity.
| Model | Score |
|-------------------------------|-------------|
| `scibert-nli` (this) | 74.50 |
| `bert-base-nli-mean-tokens`[3]| 77.12 |
An example usage for similarity-based scientific paper retrieval is provided in the [Covid Papers Browser](https://github.com/gsarti/covid-papers-browser) repository.
**References:**
[1] I. Beltagy et al, [SciBERT: A Pretrained Language Model for Scientific Text](https://www.aclweb.org/anthology/D19-1371/)
[2] A. Conneau et al., [Supervised Learning of Universal Sentence Representations from Natural Language Inference Data](https://www.aclweb.org/anthology/D17-1070/)
[3] N. Reimers et I. Gurevych, [Sentence-BERT: Sentence Embeddings using Siamese BERT-Networks](https://www.aclweb.org/anthology/D19-1410/)
@@ -0,0 +1,298 @@
---
language: code
thumbnail: https://hf-dinosaur.huggingface.co/CodeBERTa/CodeBERTa.png
---
# CodeBERTa-language-id: The World’s fanciest programming language identification algo 🤯
To demonstrate the usefulness of our CodeBERTa pretrained model on downstream tasks beyond language modeling, we fine-tune the [`CodeBERTa-small-v1`](https://huggingface.co/huggingface/CodeBERTa-small-v1) checkpoint on the task of classifying a sample of code into the programming language it's written in (*programming language identification*).
We add a sequence classification head on top of the model.
On the evaluation dataset, we attain an eval accuracy and F1 > 0.999 which is not surprising given that the task of language identification is relatively easy (see an intuition why, below).
## Quick start: using the raw model
```python
CODEBERTA_LANGUAGE_ID = "huggingface/CodeBERTa-language-id"
tokenizer = RobertaTokenizer.from_pretrained(CODEBERTA_LANGUAGE_ID)
model = RobertaForSequenceClassification.from_pretrained(CODEBERTA_LANGUAGE_ID)
input_ids = tokenizer.encode(CODE_TO_IDENTIFY)
logits = model(input_ids)[0]
language_idx = logits.argmax() # index for the resulting label
```
## Quick start: using Pipelines 💪
```python
from transformers import TextClassificationPipeline
pipeline = TextClassificationPipeline(
model=RobertaForSequenceClassification.from_pretrained(CODEBERTA_LANGUAGE_ID),
tokenizer=RobertaTokenizer.from_pretrained(CODEBERTA_LANGUAGE_ID)
)
pipeline(CODE_TO_IDENTIFY)
```
Let's start with something very easy:
```python
pipeline("""
def f(x):
return x**2
""")
# [{'label': 'python', 'score': 0.9999965}]
```
Now let's probe shorter code samples:
```python
pipeline("const foo = 'bar'")
# [{'label': 'javascript', 'score': 0.9977546}]
```
What if I remove the `const` token from the assignment?
```python
pipeline("foo = 'bar'")
# [{'label': 'javascript', 'score': 0.7176245}]
```
For some reason, this is still statistically detected as JS code, even though it's also valid Python code. However, if we slightly tweak it:
```python
pipeline("foo = u'bar'")
# [{'label': 'python', 'score': 0.7638422}]
```
This is now detected as Python (Notice the `u` string modifier).
Okay, enough with the JS and Python domination already! Let's try fancier languages:
```python
pipeline("echo $FOO")
# [{'label': 'php', 'score': 0.9995257}]
```
(Yes, I used the word "fancy" to describe PHP 😅)
```python
pipeline("outcome := rand.Intn(6) + 1")
# [{'label': 'go', 'score': 0.9936151}]
```
Why is the problem of language identification so easy (with the correct toolkit)? Because code's syntax is rigid, and simple tokens such as `:=` (the assignment operator in Go) are perfect predictors of the underlying language:
```python
pipeline(":=")
# [{'label': 'go', 'score': 0.9998052}]
```
By the way, because we trained our own custom tokenizer on the [CodeSearchNet](https://github.blog/2019-09-26-introducing-the-codesearchnet-challenge/) dataset, and it handles streams of bytes in a very generic way, syntactic constructs such `:=` are represented by a single token:
```python
self.tokenizer.encode(" :=", add_special_tokens=False)
# [521]
```
<br>
## Fine-tuning code
<details>
```python
import gzip
import json
import logging
import os
from pathlib import Path
from typing import Dict, List, Tuple
import numpy as np
import torch
from sklearn.metrics import f1_score
from tokenizers.implementations.byte_level_bpe import ByteLevelBPETokenizer
from tokenizers.processors import BertProcessing
from torch.nn.utils.rnn import pad_sequence
from torch.utils.data import DataLoader, Dataset
from torch.utils.data.dataset import Dataset
from torch.utils.tensorboard.writer import SummaryWriter
from tqdm import tqdm, trange
from transformers import RobertaForSequenceClassification
from transformers.data.metrics import acc_and_f1, simple_accuracy
logging.basicConfig(level=logging.INFO)
CODEBERTA_PRETRAINED = "huggingface/CodeBERTa-small-v1"
LANGUAGES = [
"go",
"java",
"javascript",
"php",
"python",
"ruby",
]
FILES_PER_LANGUAGE = 1
EVALUATE = True
# Set up tokenizer
tokenizer = ByteLevelBPETokenizer("./pretrained/vocab.json", "./pretrained/merges.txt",)
tokenizer._tokenizer.post_processor = BertProcessing(
("</s>", tokenizer.token_to_id("</s>")), ("<s>", tokenizer.token_to_id("<s>")),
)
tokenizer.enable_truncation(max_length=512)
# Set up Tensorboard
tb_writer = SummaryWriter()
class CodeSearchNetDataset(Dataset):
examples: List[Tuple[List[int], int]]
def __init__(self, split: str = "train"):
"""
train | valid | test
"""
self.examples = []
src_files = []
for language in LANGUAGES:
src_files += list(
Path("../CodeSearchNet/resources/data/").glob(f"{language}/final/jsonl/{split}/*.jsonl.gz")
)[:FILES_PER_LANGUAGE]
for src_file in src_files:
label = src_file.parents[3].name
label_idx = LANGUAGES.index(label)
print("🔥", src_file, label)
lines = []
fh = gzip.open(src_file, mode="rt", encoding="utf-8")
for line in fh:
o = json.loads(line)
lines.append(o["code"])
examples = [(x.ids, label_idx) for x in tokenizer.encode_batch(lines)]
self.examples += examples
print("🔥🔥")
def __len__(self):
return len(self.examples)
def __getitem__(self, i):
# We’ll pad at the batch level.
return self.examples[i]
model = RobertaForSequenceClassification.from_pretrained(CODEBERTA_PRETRAINED, num_labels=len(LANGUAGES))
train_dataset = CodeSearchNetDataset(split="train")
eval_dataset = CodeSearchNetDataset(split="test")
def collate(examples):
input_ids = pad_sequence([torch.tensor(x[0]) for x in examples], batch_first=True, padding_value=1)
labels = torch.tensor([x[1] for x in examples])
# ^^ uncessary .unsqueeze(-1)
return input_ids, labels
train_dataloader = DataLoader(train_dataset, batch_size=256, shuffle=True, collate_fn=collate)
batch = next(iter(train_dataloader))
model.to("cuda")
model.train()
for param in model.roberta.parameters():
param.requires_grad = False
## ^^ Only train final layer.
print(f"num params:", model.num_parameters())
print(f"num trainable params:", model.num_parameters(only_trainable=True))
def evaluate():
eval_loss = 0.0
nb_eval_steps = 0
preds = np.empty((0), dtype=np.int64)
out_label_ids = np.empty((0), dtype=np.int64)
model.eval()
eval_dataloader = DataLoader(eval_dataset, batch_size=512, collate_fn=collate)
for step, (input_ids, labels) in enumerate(tqdm(eval_dataloader, desc="Eval")):
with torch.no_grad():
outputs = model(input_ids=input_ids.to("cuda"), labels=labels.to("cuda"))
loss = outputs[0]
logits = outputs[1]
eval_loss += loss.mean().item()
nb_eval_steps += 1
preds = np.append(preds, logits.argmax(dim=1).detach().cpu().numpy(), axis=0)
out_label_ids = np.append(out_label_ids, labels.detach().cpu().numpy(), axis=0)
eval_loss = eval_loss / nb_eval_steps
acc = simple_accuracy(preds, out_label_ids)
f1 = f1_score(y_true=out_label_ids, y_pred=preds, average="macro")
print("=== Eval: loss ===", eval_loss)
print("=== Eval: acc. ===", acc)
print("=== Eval: f1 ===", f1)
# print(acc_and_f1(preds, out_label_ids))
tb_writer.add_scalars("eval", {"loss": eval_loss, "acc": acc, "f1": f1}, global_step)
### Training loop
global_step = 0
train_iterator = trange(0, 4, desc="Epoch")
optimizer = torch.optim.AdamW(model.parameters())
for _ in train_iterator:
epoch_iterator = tqdm(train_dataloader, desc="Iteration")
for step, (input_ids, labels) in enumerate(epoch_iterator):
optimizer.zero_grad()
outputs = model(input_ids=input_ids.to("cuda"), labels=labels.to("cuda"))
loss = outputs[0]
loss.backward()
tb_writer.add_scalar("training_loss", loss.item(), global_step)
optimizer.step()
global_step += 1
if EVALUATE and global_step % 50 == 0:
evaluate()
model.train()
evaluate()
os.makedirs("./models/CodeBERT-language-id", exist_ok=True)
model.save_pretrained("./models/CodeBERT-language-id")
```
</details>
<br>
## CodeSearchNet citation
<details>
```bibtex
@article{husain_codesearchnet_2019,
title = {{CodeSearchNet} {Challenge}: {Evaluating} the {State} of {Semantic} {Code} {Search}},
shorttitle = {{CodeSearchNet} {Challenge}},
url = {http://arxiv.org/abs/1909.09436},
urldate = {2020-03-12},
journal = {arXiv:1909.09436 [cs, stat]},
author = {Husain, Hamel and Wu, Ho-Hsiang and Gazit, Tiferet and Allamanis, Miltiadis and Brockschmidt, Marc},
month = sep,
year = {2019},
note = {arXiv: 1909.09436},
}
```
</details>
@@ -0,0 +1,128 @@
---
language: code
thumbnail: https://hf-dinosaur.huggingface.co/CodeBERTa/CodeBERTa.png
---
# CodeBERTa
CodeBERTa is a RoBERTa-like model trained on the [CodeSearchNet](https://github.blog/2019-09-26-introducing-the-codesearchnet-challenge/) dataset from GitHub.
Supported languages:
```shell
"go"
"java"
"javascript"
"php"
"python"
"ruby"
```
The **tokenizer** is a Byte-level BPE tokenizer trained on the corpus using Hugging Face `tokenizers`.
Because it is trained on a corpus of code (vs. natural language), it encodes the corpus efficiently (the sequences are between 33% to 50% shorter, compared to the same corpus tokenized by gpt2/roberta).
The (small) **model** is a 6-layer, 84M parameters, RoBERTa-like Transformer model – that’s the same number of layers & heads as DistilBERT – initialized from the default initialization settings and trained from scratch on the full corpus (~2M functions) for 5 epochs.
### Tensorboard for this training ⤵️
[![tb](https://hf-dinosaur.huggingface.co/CodeBERTa/tensorboard.png)](https://tensorboard.dev/experiment/irRI7jXGQlqmlxXS0I07ew/#scalars)
## Quick start: masked language modeling prediction
```python
PHP_CODE = """
public static <mask> set(string $key, $value) {
if (!in_array($key, self::$allowedKeys)) {
throw new \InvalidArgumentException('Invalid key given');
}
self::$storedValues[$key] = $value;
}
""".lstrip()
```
### Does the model know how to complete simple PHP code?
```python
from transformers import pipeline
fill_mask = pipeline(
"fill-mask",
model="huggingface/CodeBERTa-small-v1",
tokenizer="huggingface/CodeBERTa-small-v1"
)
fill_mask(PHP_CODE)
## Top 5 predictions:
#
' function' # prob 0.9999827146530151
'function' #
' void' #
' def' #
' final' #
```
### Yes! That was easy 🎉 What about some Python (warning: this is going to be meta)
```python
PYTHON_CODE = """
def pipeline(
task: str,
model: Optional = None,
framework: Optional[<mask>] = None,
**kwargs
) -> Pipeline:
pass
""".lstrip()
```
Results:
```python
'framework', 'Framework', ' framework', 'None', 'str'
```
> This program can auto-complete itself! 😱
### Just for fun, let's try to mask natural language (not code):
```python
fill_mask("My name is <mask>.")
# {'sequence': '<s> My name is undefined.</s>', 'score': 0.2548016905784607, 'token': 3353}
# {'sequence': '<s> My name is required.</s>', 'score': 0.07290805131196976, 'token': 2371}
# {'sequence': '<s> My name is null.</s>', 'score': 0.06323737651109695, 'token': 469}
# {'sequence': '<s> My name is name.</s>', 'score': 0.021919190883636475, 'token': 652}
# {'sequence': '<s> My name is disabled.</s>', 'score': 0.019681859761476517, 'token': 7434}
```
This (kind of) works because code contains comments (which contain natural language).
Of course, the most frequent name for a Computer scientist must be undefined 🤓.
## Downstream task: [programming language identification](https://huggingface.co/huggingface/CodeBERTa-language-id)
See the model card for **[`huggingface/CodeBERTa-language-id`](https://huggingface.co/huggingface/CodeBERTa-language-id)** 🤯.
<br>
## CodeSearchNet citation
<details>
```bibtex
@article{husain_codesearchnet_2019,
title = {{CodeSearchNet} {Challenge}: {Evaluating} the {State} of {Semantic} {Code} {Search}},
shorttitle = {{CodeSearchNet} {Challenge}},
url = {http://arxiv.org/abs/1909.09436},
urldate = {2020-03-12},
journal = {arXiv:1909.09436 [cs, stat]},
author = {Husain, Hamel and Wu, Ho-Hsiang and Gazit, Tiferet and Allamanis, Miltiadis and Brockschmidt, Marc},
month = sep,
year = {2019},
note = {arXiv: 1909.09436},
}
```
</details>
@@ -0,0 +1,92 @@
---
language: malay
---
# Bahasa BERT Model
Pretrained BERT base language model for Malay and Indonesian.
## Pretraining Corpus
`bert-base-bahasa-cased` model was pretrained on ~1.8 Billion words. We trained on both standard and social media language structures, and below is list of data we trained on,
1. [dumping wikipedia](https://github.com/huseinzol05/Malaya-Dataset#wikipedia-1).
2. [local instagram](https://github.com/huseinzol05/Malaya-Dataset#instagram).
3. [local twitter](https://github.com/huseinzol05/Malaya-Dataset#twitter-1).
4. [local news](https://github.com/huseinzol05/Malaya-Dataset#public-news).
5. [local parliament text](https://github.com/huseinzol05/Malaya-Dataset#parliament).
6. [local singlish/manglish text](https://github.com/huseinzol05/Malaya-Dataset#singlish-text).
7. [IIUM Confession](https://github.com/huseinzol05/Malaya-Dataset#iium-confession).
8. [Wattpad](https://github.com/huseinzol05/Malaya-Dataset#wattpad).
9. [Academia PDF](https://github.com/huseinzol05/Malaya-Dataset#academia-pdf).
Preprocessing steps can reproduce from here, [Malaya/pretrained-model/preprocess](https://github.com/huseinzol05/Malaya/tree/master/pretrained-model/preprocess).
## Pretraining details
- This model was trained using Google BERT's github [repository](https://github.com/google-research/bert) on 3 Titan V100 32GB VRAM.
- All steps can reproduce from here, [Malaya/pretrained-model/bert](https://github.com/huseinzol05/Malaya/tree/master/pretrained-model/bert).
## Load Pretrained Model
You can use this model by installing `torch` or `tensorflow` and Huggingface library `transformers`. And you can use it directly by initializing it like this:
```python
from transformers import AlbertTokenizer, BertModel
model = BertModel.from_pretrained('huseinzol05/bert-base-bahasa-cased')
tokenizer = AlbertTokenizer.from_pretrained(
'huseinzol05/bert-base-bahasa-cased',
unk_token = '[UNK]',
pad_token = '[PAD]',
do_lower_case = False,
)
```
We use [google/sentencepiece](https://github.com/google/sentencepiece) to train the tokenizer, so to use it, need to load from `AlbertTokenizer`.
## Example using AutoModelWithLMHead
```python
from transformers import AlbertTokenizer, AutoModelWithLMHead, pipeline
model = AutoModelWithLMHead.from_pretrained('huseinzol05/bert-base-bahasa-cased')
tokenizer = AlbertTokenizer.from_pretrained(
'huseinzol05/bert-base-bahasa-cased',
unk_token = '[UNK]',
pad_token = '[PAD]',
do_lower_case = False,
)
fill_mask = pipeline('fill-mask', model = model, tokenizer = tokenizer)
print(fill_mask('makan ayam dengan [MASK]'))
```
Output is,
```text
[{'sequence': '[CLS] makan ayam dengan rendang[SEP]',
'score': 0.10812027007341385,
'token': 2446},
{'sequence': '[CLS] makan ayam dengan kicap[SEP]',
'score': 0.07653367519378662,
'token': 12928},
{'sequence': '[CLS] makan ayam dengan nasi[SEP]',
'score': 0.06839974224567413,
'token': 450},
{'sequence': '[CLS] makan ayam dengan ayam[SEP]',
'score': 0.059544261544942856,
'token': 638},
{'sequence': '[CLS] makan ayam dengan sayur[SEP]',
'score': 0.05294966697692871,
'token': 1639}]
```
## Results
For further details on the model performance, simply checkout accuracy page from Malaya, https://malaya.readthedocs.io/en/latest/Accuracy.html, we compared with traditional models.
## Acknowledgement
Thanks to [Im Big](https://www.facebook.com/imbigofficial/), [LigBlou](https://www.facebook.com/ligblou), [Mesolitica](https://mesolitica.com/) and [KeyReply](https://www.keyreply.com/) for sponsoring AWS, Google and GPU clouds to train BERT for Bahasa.
@@ -0,0 +1,64 @@
---
language: malay
---
# Bahasa XLNet Model
Pretrained XLNet base language model for Malay and Indonesian.
## Pretraining Corpus
`XLNET-base-bahasa-cased` model was pretrained on ~1.8 Billion words. We trained on both standard and social media language structures, and below is list of data we trained on,
1. [dumping wikipedia](https://github.com/huseinzol05/Malaya-Dataset#wikipedia-1).
2. [local instagram](https://github.com/huseinzol05/Malaya-Dataset#instagram).
3. [local twitter](https://github.com/huseinzol05/Malaya-Dataset#twitter-1).
4. [local news](https://github.com/huseinzol05/Malaya-Dataset#public-news).
5. [local parliament text](https://github.com/huseinzol05/Malaya-Dataset#parliament).
6. [local singlish/manglish text](https://github.com/huseinzol05/Malaya-Dataset#singlish-text).
7. [IIUM Confession](https://github.com/huseinzol05/Malaya-Dataset#iium-confession).
8. [Wattpad](https://github.com/huseinzol05/Malaya-Dataset#wattpad).
9. [Academia PDF](https://github.com/huseinzol05/Malaya-Dataset#academia-pdf).
Preprocessing steps can reproduce from here, [Malaya/pretrained-model/preprocess](https://github.com/huseinzol05/Malaya/tree/master/pretrained-model/preprocess).
## Pretraining details
- This model was trained using zihangdai XLNet's github [repository](https://github.com/zihangdai/xlnet) on 3 Titan V100 32GB VRAM.
- All steps can reproduce from here, [Malaya/pretrained-model/xlnet](https://github.com/huseinzol05/Malaya/tree/master/pretrained-model/xlnet).
## Load Pretrained Model
You can use this model by installing `torch` or `tensorflow` and Huggingface library `transformers`. And you can use it directly by initializing it like this:
```python
from transformers import XLNetTokenizer, XLNetModel
model = XLNetModel.from_pretrained('huseinzol05/xlnet-base-bahasa-cased')
tokenizer = XLNetTokenizer.from_pretrained(
'huseinzol05/xlnet-base-bahasa-cased', do_lower_case = False
)
```
## Example using AutoModelWithLMHead
```python
from transformers import AlbertTokenizer, AutoModelWithLMHead, pipeline
model = AutoModelWithLMHead.from_pretrained('huseinzol05/xlnet-base-bahasa-cased')
tokenizer = XLNetTokenizer.from_pretrained(
'huseinzol05/xlnet-base-bahasa-cased', do_lower_case = False
)
fill_mask = pipeline('fill-mask', model = model, tokenizer = tokenizer)
print(fill_mask('makan ayam dengan [MASK]'))
```
## Results
For further details on the model performance, simply checkout accuracy page from Malaya, https://malaya.readthedocs.io/en/latest/Accuracy.html, we compared with traditional models.
## Acknowledgement
Thanks to [Im Big](https://www.facebook.com/imbigofficial/), [LigBlou](https://www.facebook.com/ligblou), [Mesolitica](https://mesolitica.com/) and [KeyReply](https://www.keyreply.com/) for sponsoring AWS, Google and GPU clouds to train XLNet for Bahasa.
@@ -0,0 +1,74 @@
---
thumbnail: https://huggingface.co/front/thumbnails/google.png
---
BERT Miniatures
===
This is the set of 24 BERT models referenced in [Well-Read Students Learn Better: On the Importance of Pre-training Compact Models](https://arxiv.org/abs/1908.08962) (English only, uncased, trained with WordPiece masking).
We have shown that the standard BERT recipe (including model architecture and training objective) is effective on a wide range of model sizes, beyond BERT-Base and BERT-Large. The smaller BERT models are intended for environments with restricted computational resources. They can be fine-tuned in the same manner as the original BERT models. However, they are most effective in the context of knowledge distillation, where the fine-tuning labels are produced by a larger and more accurate teacher.
Our goal is to enable research in institutions with fewer computational resources and encourage the community to seek directions of innovation alternative to increasing model capacity.
You can download the 24 BERT miniatures either from the [official BERT Github page](https://github.com/google-research/bert/), or via HuggingFace from the links below:
| |H=128|H=256|H=512|H=768|
|---|:---:|:---:|:---:|:---:|
| **L=2** |[**2/128 (BERT-Tiny)**][2_128]|[2/256][2_256]|[2/512][2_512]|[2/768][2_768]|
| **L=4** |[4/128][4_128]|[**4/256 (BERT-Mini)**][4_256]|[**4/512 (BERT-Small)**][4_512]|[4/768][4_768]|
| **L=6** |[6/128][6_128]|[6/256][6_256]|[6/512][6_512]|[6/768][6_768]|
| **L=8** |[8/128][8_128]|[8/256][8_256]|[**8/512 (BERT-Medium)**][8_512]|[8/768][8_768]|
| **L=10** |[10/128][10_128]|[10/256][10_256]|[10/512][10_512]|[10/768][10_768]|
| **L=12** |[12/128][12_128]|[12/256][12_256]|[12/512][12_512]|[**12/768 (BERT-Base)**][12_768]|
Note that the BERT-Base model in this release is included for completeness only; it was re-trained under the same regime as the original model.
Here are the corresponding GLUE scores on the test set:
|Model|Score|CoLA|SST-2|MRPC|STS-B|QQP|MNLI-m|MNLI-mm|QNLI(v2)|RTE|WNLI|AX|
|---|:---:|:---:|:---:|:---:|:---:|:---:|:---:|:---:|:---:|:---:|:---:|:---:|
|BERT-Tiny|64.2|0.0|83.2|81.1/71.1|74.3/73.6|62.2/83.4|70.2|70.3|81.5|57.2|62.3|21.0|
|BERT-Mini|65.8|0.0|85.9|81.1/71.8|75.4/73.3|66.4/86.2|74.8|74.3|84.1|57.9|62.3|26.1|
|BERT-Small|71.2|27.8|89.7|83.4/76.2|78.8/77.0|68.1/87.0|77.6|77.0|86.4|61.8|62.3|28.6|
|BERT-Medium|73.5|38.0|89.6|86.6/81.6|80.4/78.4|69.6/87.9|80.0|79.1|87.7|62.2|62.3|30.5|
For each task, we selected the best fine-tuning hyperparameters from the lists below, and trained for 4 epochs:
- batch sizes: 8, 16, 32, 64, 128
- learning rates: 3e-4, 1e-4, 5e-5, 3e-5
If you use these models, please cite the following paper:
```
@article{turc2019,
title={Well-Read Students Learn Better: On the Importance of Pre-training Compact Models},
author={Turc, Iulia and Chang, Ming-Wei and Lee, Kenton and Toutanova, Kristina},
journal={arXiv preprint arXiv:1908.08962v2 },
year={2019}
}
```
[2_128]: https://huggingface.co/google/bert_uncased_L-2_H-128_A-2
[2_256]: https://huggingface.co/google/bert_uncased_L-2_H-256_A-4
[2_512]: https://huggingface.co/google/bert_uncased_L-2_H-512_A-8
[2_768]: https://huggingface.co/google/bert_uncased_L-2_H-768_A-12
[4_128]: https://huggingface.co/google/bert_uncased_L-4_H-128_A-2
[4_256]: https://huggingface.co/google/bert_uncased_L-4_H-256_A-4
[4_512]: https://huggingface.co/google/bert_uncased_L-4_H-512_A-8
[4_768]: https://huggingface.co/google/bert_uncased_L-4_H-768_A-12
[6_128]: https://huggingface.co/google/bert_uncased_L-6_H-128_A-2
[6_256]: https://huggingface.co/google/bert_uncased_L-6_H-256_A-4
[6_512]: https://huggingface.co/google/bert_uncased_L-6_H-512_A-8
[6_768]: https://huggingface.co/google/bert_uncased_L-6_H-768_A-12
[8_128]: https://huggingface.co/google/bert_uncased_L-8_H-128_A-2
[8_256]: https://huggingface.co/google/bert_uncased_L-8_H-256_A-4
[8_512]: https://huggingface.co/google/bert_uncased_L-8_H-512_A-8
[8_768]: https://huggingface.co/google/bert_uncased_L-8_H-768_A-12
[10_128]: https://huggingface.co/google/bert_uncased_L-10_H-128_A-2
[10_256]: https://huggingface.co/google/bert_uncased_L-10_H-256_A-4
[10_512]: https://huggingface.co/google/bert_uncased_L-10_H-512_A-8
[10_768]: https://huggingface.co/google/bert_uncased_L-10_H-768_A-12
[12_128]: https://huggingface.co/google/bert_uncased_L-12_H-128_A-2
[12_256]: https://huggingface.co/google/bert_uncased_L-12_H-256_A-4
[12_512]: https://huggingface.co/google/bert_uncased_L-12_H-512_A-8
[12_768]: https://huggingface.co/google/bert_uncased_L-12_H-768_A-12
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@@ -0,0 +1,20 @@
---
language: swedish
---
# BERTSSON Models
The models are trained on:
- Government Text
- Swedish Literature
- Swedish News
Corpus size: Roughly 6B tokens.
The following models are currently available:
- **bertsson** - A BERT base model trained with the same hyperparameters as first published by Google.
All models are cased and trained with whole word masking.
Stay tuned for evaluations.
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View File
@@ -0,0 +1,123 @@
---
language: code
thumbnail:
---
# CodeBERTaPy
CodeBERTaPy is a RoBERTa-like model trained on the [CodeSearchNet](https://github.blog/2019-09-26-introducing-the-codesearchnet-challenge/) dataset from GitHub for `python` by [Manuel Romero](https://twitter.com/mrm8488)
The **tokenizer** is a Byte-level BPE tokenizer trained on the corpus using Hugging Face `tokenizers`.
Because it is trained on a corpus of code (vs. natural language), it encodes the corpus efficiently (the sequences are between 33% to 50% shorter, compared to the same corpus tokenized by gpt2/roberta).
The (small) **model** is a 6-layer, 84M parameters, RoBERTa-like Transformer model – that’s the same number of layers & heads as DistilBERT – initialized from the default initialization settings and trained from scratch on the full `python` corpus for 4 epochs.
## Quick start: masked language modeling prediction
```python
PYTHON_CODE = """
fruits = ['apples', 'bananas', 'oranges']
for idx, <mask> in enumerate(fruits):
print("index is %d and value is %s" % (idx, val))
""".lstrip()
```
### Does the model know how to complete simple Python code?
```python
from transformers import pipeline
fill_mask = pipeline(
"fill-mask",
model="mrm8488/CodeBERTaPy",
tokenizer="mrm8488/CodeBERTaPy"
)
fill_mask(PYTHON_CODE)
## Top 5 predictions:
'val' # prob 0.980728805065155
'value'
'idx'
',val'
'_'
```
### Yes! That was easy 🎉 Let's try with another Flask like example
```python
PYTHON_CODE2 = """
@app.route('/<name>')
def hello_name(name):
return "Hello {}!".format(<mask>)
if __name__ == '__main__':
app.run()
""".lstrip()
fill_mask(PYTHON_CODE2)
## Top 5 predictions:
'name' # prob 0.9961813688278198
' name'
'url'
'description'
'self'
```
### Yeah! It works 🎉 Let's try with another Tensorflow/Keras like example
```python
PYTHON_CODE3="""
model = keras.Sequential([
keras.layers.Flatten(input_shape=(28, 28)),
keras.layers.<mask>(128, activation='relu'),
keras.layers.Dense(10, activation='softmax')
])
""".lstrip()
fill_mask(PYTHON_CODE3)
## Top 5 predictions:
'Dense' # prob 0.4482928514480591
'relu'
'Flatten'
'Activation'
'Conv'
```
> Great! 🎉
## This work is heavely inspired on [CodeBERTa](https://github.com/huggingface/transformers/blob/master/model_cards/huggingface/CodeBERTa-small-v1/README.md) by huggingface team
<br>
## CodeSearchNet citation
<details>
```bibtex
@article{husain_codesearchnet_2019,
title = {{CodeSearchNet} {Challenge}: {Evaluating} the {State} of {Semantic} {Code} {Search}},
shorttitle = {{CodeSearchNet} {Challenge}},
url = {http://arxiv.org/abs/1909.09436},
urldate = {2020-03-12},
journal = {arXiv:1909.09436 [cs, stat]},
author = {Husain, Hamel and Wu, Ho-Hsiang and Gazit, Tiferet and Allamanis, Miltiadis and Brockschmidt, Marc},
month = sep,
year = {2019},
note = {arXiv: 1909.09436},
}
```
</details>
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -0,0 +1,60 @@
---
language: english
thumbnail:
---
# GPT-2 + CORD19 dataset : 🦠 ✍ ⚕
**GPT-2** fine-tuned on **biorxiv_medrxiv** and **comm_use_subset files** from [CORD-19](https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge) dataset.
## Datasets details:
| Dataset | # Files |
| ---------------------- | ----- |
| biorxiv_medrxiv | 885 |
| comm_use_subse | 9K |
## Model training
The model was trained on a Tesla P100 GPU and 25GB of RAM with the following command:
```bash
export TRAIN_FILE=/path/to/dataset/train.txt
python run_language_modeling.py \
--model_type gpt2 \
--model_name_or_path gpt2 \
--do_train \
--train_data_file $TRAIN_FILE \
--num_train_epochs 4 \
--output_dir model_output \
--overwrite_output_dir \
--save_steps 10000 \
--per_gpu_train_batch_size 3
```
<img alt="training loss" src="https://svgshare.com/i/JTf.svg' title='GTP-2-finetuned-CORDS19-loss" width="600" height="300" />
## Model in action / Example of usage: ✒
You can get the following script [here](https://github.com/huggingface/transformers/blob/master/examples/run_generation.py)
```bash
python run_generation.py \
--model_type gpt2 \
--model_name_or_path mrm8488/GPT-2-finetuned-CORD19 \
--length 200
```
```txt
# Input: the effects of COVID-19 on the lungs
# Output: === GENERATED SEQUENCE 1 ===
the effects of COVID-19 on the lungs are currently debated (86). The role of this virus in the pathogenesis of pneumonia and lung cancer is still debated. MERS-CoV is also known to cause acute respiratory distress syndrome (87) and is associated with increased expression of pulmonary fibrosis markers (88). Thus, early airway inflammation may play an important role in the pathogenesis of coronavirus pneumonia and may contribute to the severe disease and/or mortality observed in coronavirus patients.
Pneumonia is an acute, often fatal disease characterized by severe edema, leakage of oxygen and bronchiolar inflammation. Viruses include coronaviruses, and the role of oxygen depletion is complicated by lung injury and fibrosis in the lung, in addition to susceptibility to other lung diseases. The progression of the disease may be variable, depending on the lung injury, pathologic role, prognosis, and the immune status of the patient. Inflammatory responses to respiratory viruses cause various pathologies of the respiratory
```
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488) | [LinkedIn](https://www.linkedin.com/in/manuel-romero-cs/)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -0,0 +1,122 @@
---
language: english
thumbnail:
---
# BERT-Medium fine-tuned on SQuAD v2
[BERT-Medium](https://github.com/google-research/bert/) created by [Google Research](https://github.com/google-research) and fine-tuned on [SQuAD 2.0](https://rajpurkar.github.io/SQuAD-explorer/) for **Q&A** downstream task.
**Mode size** (after training): **157.46 MB**
## Details of BERT-Small and its 'family' (from their documentation)
Released on March 11th, 2020
This is model is a part of 24 smaller BERT models (English only, uncased, trained with WordPiece masking) referenced in [Well-Read Students Learn Better: On the Importance of Pre-training Compact Models](https://arxiv.org/abs/1908.08962).
The smaller BERT models are intended for environments with restricted computational resources. They can be fine-tuned in the same manner as the original BERT models. However, they are most effective in the context of knowledge distillation, where the fine-tuning labels are produced by a larger and more accurate teacher.
## Details of the downstream task (Q&A) - Dataset
[SQuAD2.0](https://rajpurkar.github.io/SQuAD-explorer/) combines the 100,000 questions in SQuAD1.1 with over 50,000 unanswerable questions written adversarially by crowdworkers to look similar to answerable ones. To do well on SQuAD2.0, systems must not only answer questions when possible, but also determine when no answer is supported by the paragraph and abstain from answering.
| Dataset | Split | # samples |
| -------- | ----- | --------- |
| SQuAD2.0 | train | 130k |
| SQuAD2.0 | eval | 12.3k |
## Model training
The model was trained on a Tesla P100 GPU and 25GB of RAM.
The script for fine tuning can be found [here](https://github.com/huggingface/transformers/blob/master/examples/run_squad.py)
## Results:
| Metric | # Value |
| ------ | --------- |
| **EM** | **65.95** |
| **F1** | **70.11** |
### Raw metrics from benchmark included in training script:
```json
{
"exact": 65.95637159942727,
"f1": 70.11632254245896,
"total": 11873,
"HasAns_exact": 67.79689608636977,
"HasAns_f1": 76.12872765631123,
"HasAns_total": 5928,
"NoAns_exact": 64.12111017661901,
"NoAns_f1": 64.12111017661901,
"NoAns_total": 5945,
"best_exact": 65.96479407058031,
"best_exact_thresh": 0.0,
"best_f1": 70.12474501361196,
"best_f1_thresh": 0.0
}
```
## Comparison:
| Model | EM | F1 score | SIZE (MB) |
| --------------------------------------------------------------------------------------------- | --------- | --------- | --------- |
| [bert-tiny-finetuned-squadv2](https://huggingface.co/mrm8488/bert-tiny-finetuned-squadv2) | 48.60 | 49.73 | **16.74** |
| [bert-tiny-5-finetuned-squadv2](https://huggingface.co/mrm8488/bert-tiny-5-finetuned-squadv2) | 57.12 | 60.86 | 24.34 |
| [bert-mini-finetuned-squadv2](https://huggingface.co/mrm8488/bert-mini-finetuned-squadv2) | 56.31 | 59.65 | 42.63 |
| [bert-mini-5-finetuned-squadv2](https://huggingface.co/mrm8488/bert-mini-5-finetuned-squadv2) | 63.51 | 66.78 | 66.76 |
| [bert-small-finetuned-squadv2](https://huggingface.co/mrm8488/bert-small-finetuned-squadv2) | 60.49 | 64.21 | 109.74 |
| [bert-medium-finetuned-squadv2](https://huggingface.co/mrm8488/bert-medium-finetuned-squadv2) | **65.95** | **70.11** | 157.46 |
## Model in action
Fast usage with **pipelines**:
```python
from transformers import pipeline
qa_pipeline = pipeline(
"question-answering",
model="mrm8488/bert-small-finetuned-squadv2",
tokenizer="mrm8488/bert-small-finetuned-squadv2"
)
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "Who has been working hard for hugginface/transformers lately?"
})
# Output:
```
```json
{
"answer": "Manuel Romero",
"end": 13,
"score": 0.9939319924374637,
"start": 0
}
```
### Yes! That was easy 🎉 Let's try with another example
```python
qa_pipeline({
'context': "Manuel Romero has been working remotely in the repository hugginface/transformers lately",
'question': "How has been working Manuel Romero?"
})
# Output:
```
```json
{ "answer": "remotely", "end": 39, "score": 0.3612058272768017, "start": 31 }
```
### It works!! 🎉 🎉 🎉
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488) | [LinkedIn](https://www.linkedin.com/in/manuel-romero-cs/)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -0,0 +1,105 @@
---
language: english
thumbnail:
---
# BERT-Mini fine-tuned on SQuAD v2
[BERT-Mini](https://github.com/google-research/bert/) created by [Google Research](https://github.com/google-research) and fine-tuned on [SQuAD 2.0](https://rajpurkar.github.io/SQuAD-explorer/) for **Q&A** downstream task.
**Mode size** (after training): **42.63 MB**
## Details of BERT-Mini and its 'family' (from their documentation)
Released on March 11th, 2020
This is model is a part of 24 smaller BERT models (English only, uncased, trained with WordPiece masking) referenced in [Well-Read Students Learn Better: On the Importance of Pre-training Compact Models](https://arxiv.org/abs/1908.08962).
The smaller BERT models are intended for environments with restricted computational resources. They can be fine-tuned in the same manner as the original BERT models. However, they are most effective in the context of knowledge distillation, where the fine-tuning labels are produced by a larger and more accurate teacher.
## Details of the downstream task (Q&A) - Dataset
[SQuAD2.0](https://rajpurkar.github.io/SQuAD-explorer/) combines the 100,000 questions in SQuAD1.1 with over 50,000 unanswerable questions written adversarially by crowdworkers to look similar to answerable ones. To do well on SQuAD2.0, systems must not only answer questions when possible, but also determine when no answer is supported by the paragraph and abstain from answering.
| Dataset | Split | # samples |
| -------- | ----- | --------- |
| SQuAD2.0 | train | 130k |
| SQuAD2.0 | eval | 12.3k |
## Model training
The model was trained on a Tesla P100 GPU and 25GB of RAM.
The script for fine tuning can be found [here](https://github.com/huggingface/transformers/blob/master/examples/run_squad.py)
## Results:
| Metric | # Value |
| ------ | --------- |
| **EM** | **56.31** |
| **F1** | **59.65** |
## Comparison:
| Model | EM | F1 score | SIZE (MB) |
| ----------------------------------------------------------------------------------------- | --------- | --------- | --------- |
| [bert-tiny-finetuned-squadv2](https://huggingface.co/mrm8488/bert-tiny-finetuned-squadv2) | 48.60 | 49.73 | **16.74** |
| [bert-tiny-5-finetuned-squadv2](https://huggingface.co/mrm8488/bert-tiny-5-finetuned-squadv2) | 57.12 | 60.86 | 24.34 |
| [bert-mini-finetuned-squadv2](https://huggingface.co/mrm8488/bert-mini-finetuned-squadv2) | 56.31 | 59.65 | 42.63 |
| [bert-mini-5-finetuned-squadv2](https://huggingface.co/mrm8488/bert-mini-5-finetuned-squadv2) | **63.51** | **66.78** | 66.76 |
## Model in action
Fast usage with **pipelines**:
```python
from transformers import pipeline
qa_pipeline = pipeline(
"question-answering",
model="mrm8488/bert-mini-finetuned-squadv2",
tokenizer="mrm8488/bert-mini-finetuned-squadv2"
)
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "Who has been working hard for hugginface/transformers lately?"
})
# Output:
```
```json
{
"answer": "Manuel Romero",
"end": 13,
"score": 0.9676484207783673,
"start": 0
}
```
### Yes! That was easy 🎉 Let's try with another example
```python
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "For which company has worked Manuel Romero?"
})
# Output:
```
```json
{
"answer": "hugginface/transformers",
"end": 79,
"score": 0.5301655914731853,
"start": 56
}
```
### It works!! 🎉 🎉 🎉
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488) | [LinkedIn](https://www.linkedin.com/in/manuel-romero-cs/)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -0,0 +1,104 @@
---
language: english
thumbnail:
---
# BERT-Small fine-tuned on SQuAD v2
[BERT-Small](https://github.com/google-research/bert/) created by [Google Research](https://github.com/google-research) and fine-tuned on [SQuAD 2.0](https://rajpurkar.github.io/SQuAD-explorer/) for **Q&A** downstream task.
**Mode size** (after training): **109.74 MB**
## Details of BERT-Small and its 'family' (from their documentation)
Released on March 11th, 2020
This is model is a part of 24 smaller BERT models (English only, uncased, trained with WordPiece masking) referenced in [Well-Read Students Learn Better: On the Importance of Pre-training Compact Models](https://arxiv.org/abs/1908.08962).
The smaller BERT models are intended for environments with restricted computational resources. They can be fine-tuned in the same manner as the original BERT models. However, they are most effective in the context of knowledge distillation, where the fine-tuning labels are produced by a larger and more accurate teacher.
## Details of the downstream task (Q&A) - Dataset
[SQuAD2.0](https://rajpurkar.github.io/SQuAD-explorer/) combines the 100,000 questions in SQuAD1.1 with over 50,000 unanswerable questions written adversarially by crowdworkers to look similar to answerable ones. To do well on SQuAD2.0, systems must not only answer questions when possible, but also determine when no answer is supported by the paragraph and abstain from answering.
| Dataset | Split | # samples |
| -------- | ----- | --------- |
| SQuAD2.0 | train | 130k |
| SQuAD2.0 | eval | 12.3k |
## Model training
The model was trained on a Tesla P100 GPU and 25GB of RAM.
The script for fine tuning can be found [here](https://github.com/huggingface/transformers/blob/master/examples/run_squad.py)
## Results:
| Metric | # Value |
| ------ | --------- |
| **EM** | **60.49** |
| **F1** | **64.21** |
## Comparison:
| Model | EM | F1 score | SIZE (MB) |
| ------------------------------------------------------------------------------------------- | --------- | --------- | --------- |
| [bert-tiny-finetuned-squadv2](https://huggingface.co/mrm8488/bert-tiny-finetuned-squadv2) | 48.60 | 49.73 | **16.74** |
| [bert-mini-finetuned-squadv2](https://huggingface.co/mrm8488/bert-mini-finetuned-squadv2) | 56.31 | 59.65 | 42.63 |
| [bert-small-finetuned-squadv2](https://huggingface.co/mrm8488/bert-small-finetuned-squadv2) | **60.49** | **64.21** | 109.74 |
## Model in action
Fast usage with **pipelines**:
```python
from transformers import pipeline
qa_pipeline = pipeline(
"question-answering",
model="mrm8488/bert-small-finetuned-squadv2",
tokenizer="mrm8488/bert-small-finetuned-squadv2"
)
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "Who has been working hard for hugginface/transformers lately?"
})
# Output:
```
```json
{
"answer": "Manuel Romero",
"end": 13,
"score": 0.9939319924374637,
"start": 0
}
```
### Yes! That was easy 🎉 Let's try with another example
```python
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "For which company has worked Manuel Romero?"
})
# Output:
```
```json
{
"answer": "hugginface/transformers",
"end": 79,
"score": 0.6024888734447131,
"start": 56
}
```
### It works!! 🎉 🎉 🎉
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488) | [LinkedIn](https://www.linkedin.com/in/manuel-romero-cs/)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -0,0 +1,102 @@
---
language: english
thumbnail:
---
# BERT-Tiny fine-tuned on SQuAD v2
[BERT-Tiny](https://github.com/google-research/bert/) created by [Google Research](https://github.com/google-research) and fine-tuned on [SQuAD 2.0](https://rajpurkar.github.io/SQuAD-explorer/) for **Q&A** downstream task.
**Mode size** (after training): **16.74 MB**
## Details of BERT-Tiny and its 'family' (from their documentation)
Released on March 11th, 2020
This is model is a part of 24 smaller BERT models (English only, uncased, trained with WordPiece masking) referenced in [Well-Read Students Learn Better: On the Importance of Pre-training Compact Models](https://arxiv.org/abs/1908.08962).
The smaller BERT models are intended for environments with restricted computational resources. They can be fine-tuned in the same manner as the original BERT models. However, they are most effective in the context of knowledge distillation, where the fine-tuning labels are produced by a larger and more accurate teacher.
## Details of the downstream task (Q&A) - Dataset
[SQuAD2.0](https://rajpurkar.github.io/SQuAD-explorer/) combines the 100,000 questions in SQuAD1.1 with over 50,000 unanswerable questions written adversarially by crowdworkers to look similar to answerable ones. To do well on SQuAD2.0, systems must not only answer questions when possible, but also determine when no answer is supported by the paragraph and abstain from answering.
| Dataset | Split | # samples |
| -------- | ----- | --------- |
| SQuAD2.0 | train | 130k |
| SQuAD2.0 | eval | 12.3k |
## Model training
The model was trained on a Tesla P100 GPU and 25GB of RAM.
The script for fine tuning can be found [here](https://github.com/huggingface/transformers/blob/master/examples/run_squad.py)
## Results:
| Metric | # Value |
| ------ | --------- |
| **EM** | **48.60** |
| **F1** | **49.73** |
| Model | EM | F1 score | SIZE (MB) |
| ----------------------------------------------------------------------------------------- | --------- | --------- | --------- |
| [bert-tiny-finetuned-squadv2](https://huggingface.co/mrm8488/bert-tiny-finetuned-squadv2) | 48.60 | 49.73 | **16.74** |
| [bert-tiny-5-finetuned-squadv2](https://huggingface.co/mrm8488/bert-tiny-5-finetuned-squadv2) | **57.12** | **60.86** | 24.34
## Model in action
Fast usage with **pipelines**:
```python
from transformers import pipeline
qa_pipeline = pipeline(
"question-answering",
model="mrm8488/bert-tiny-finetuned-squadv2",
tokenizer="mrm8488/bert-tiny-finetuned-squadv2"
)
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "Who has been working hard for hugginface/transformers lately?"
})
# Output:
```
```json
{
"answer": "Manuel Romero",
"end": 13,
"score": 0.05684709993458714,
"start": 0
}
```
### Yes! That was easy 🎉 Let's try with another example
```python
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "For which company has worked Manuel Romero?"
})
# Output:
```
```json
{
"answer": "hugginface/transformers",
"end": 79,
"score": 0.11613431826808274,
"start": 56
}
```
### It works!! 🎉 🎉 🎉
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488) | [LinkedIn](https://www.linkedin.com/in/manuel-romero-cs/)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
+100
View File
@@ -0,0 +1,100 @@
---
language: code
thumbnail:
---
# CodeBERTaJS
CodeBERTaJS is a RoBERTa-like model trained on the [CodeSearchNet](https://github.blog/2019-09-26-introducing-the-codesearchnet-challenge/) dataset from GitHub for `javaScript` by [Manuel Romero](https://twitter.com/mrm8488)
The **tokenizer** is a Byte-level BPE tokenizer trained on the corpus using Hugging Face `tokenizers`.
Because it is trained on a corpus of code (vs. natural language), it encodes the corpus efficiently (the sequences are between 33% to 50% shorter, compared to the same corpus tokenized by gpt2/roberta).
The (small) **model** is a 6-layer, 84M parameters, RoBERTa-like Transformer model – that’s the same number of layers & heads as DistilBERT – initialized from the default initialization settings and trained from scratch on the full `javascript` corpus (120M after preproccessing) for 2 epochs.
## Quick start: masked language modeling prediction
```python
JS_CODE = """
async function createUser(req, <mask>) {
if (!validUser(req.body.user)) {
return res.status(400);
}
user = userService.createUser(req.body.user);
return res.json(user);
}
""".lstrip()
```
### Does the model know how to complete simple JS/express like code?
```python
from transformers import pipeline
fill_mask = pipeline(
"fill-mask",
model="mrm8488/codeBERTaJS",
tokenizer="mrm8488/codeBERTaJS"
)
fill_mask(JS_CODE)
## Top 5 predictions:
#
'res' # prob 0.069489665329
'next'
'req'
'user'
',req'
```
### Yes! That was easy 🎉 Let's try with another example
```python
JS_CODE_= """
function getKeys(obj) {
keys = [];
for (var [key, value] of Object.entries(obj)) {
keys.push(<mask>);
}
return keys
}
""".lstrip()
```
Results:
```python
'obj', 'key', ' value', 'keys', 'i'
```
> Not so bad! Right token was predicted as second option! 🎉
## This work is heavely inspired on [codeBERTa](https://github.com/huggingface/transformers/blob/master/model_cards/huggingface/CodeBERTa-small-v1/README.md) by huggingface team
<br>
## CodeSearchNet citation
<details>
```bibtex
@article{husain_codesearchnet_2019,
title = {{CodeSearchNet} {Challenge}: {Evaluating} the {State} of {Semantic} {Code} {Search}},
shorttitle = {{CodeSearchNet} {Challenge}},
url = {http://arxiv.org/abs/1909.09436},
urldate = {2020-03-12},
journal = {arXiv:1909.09436 [cs, stat]},
author = {Husain, Hamel and Wu, Ho-Hsiang and Gazit, Tiferet and Allamanis, Miltiadis and Brockschmidt, Marc},
month = sep,
year = {2019},
note = {arXiv: 1909.09436},
}
```
</details>
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -0,0 +1,84 @@
---
language: english
thumbnail:
---
# SpanBERT (spanbert-base-cased) fine-tuned on SQuAD v1.1
[SpanBERT](https://github.com/facebookresearch/SpanBERT) created by [Facebook Research](https://github.com/facebookresearch) and fine-tuned on [SQuAD 1.1](https://rajpurkar.github.io/SQuAD-explorer/) for **Q&A** downstream task.
## Details of SpanBERT
A pre-training method that is designed to better represent and predict spans of text.
[SpanBERT: Improving Pre-training by Representing and Predicting Spans](https://arxiv.org/abs/1907.10529)
## Details of the downstream task (Q&A) - Dataset
[SQuAD 1.1](https://rajpurkar.github.io/SQuAD-explorer/) contains 100,000+ question-answer pairs on 500+ articles.
| Dataset | Split | # samples |
| -------- | ----- | --------- |
| SQuAD1.1 | train | 87.7k |
| SQuAD1.1 | eval | 10.6k |
## Model training
The model was trained on a Tesla P100 GPU and 25GB of RAM.
The script for fine tuning can be found [here](https://github.com/huggingface/transformers/blob/master/examples/run_squad.py)
## Results:
| Metric | # Value |
| ------ | --------- |
| **EM** | **85.49** |
| **F1** | **91.98** |
### Raw metrics:
```json
{
"exact": 85.49668874172185,
"f1": 91.9845699540379,
"total": 10570,
"HasAns_exact": 85.49668874172185,
"HasAns_f1": 91.9845699540379,
"HasAns_total": 10570,
"best_exact": 85.49668874172185,
"best_exact_thresh": 0.0,
"best_f1": 91.9845699540379,
"best_f1_thresh": 0.0
}
```
## Comparison:
| Model | EM | F1 score |
| ----------------------------------------------------------------------------------------- | --------- | --------- |
| [SpanBert official repo](https://github.com/facebookresearch/SpanBERT#pre-trained-models) | - | 92.4\* |
| [spanbert-finetuned-squadv1](https://huggingface.co/mrm8488/spanbert-finetuned-squadv1) | **85.49** | **91.98** |
## Model in action
Fast usage with **pipelines**:
```python
from transformers import pipeline
qa_pipeline = pipeline(
"question-answering",
model="mrm8488/spanbert-finetuned-squadv1",
tokenizer="mrm8488/spanbert-finetuned-squadv1"
)
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "Who has been working hard for hugginface/transformers lately?"
})
```
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488) | [LinkedIn](https://www.linkedin.com/in/manuel-romero-cs/)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -0,0 +1,86 @@
---
language: english
thumbnail:
---
# SpanBERT (spanbert-base-cased) fine-tuned on SQuAD v2
[SpanBERT](https://github.com/facebookresearch/SpanBERT) created by [Facebook Research](https://github.com/facebookresearch) and fine-tuned on [SQuAD 2.0](https://rajpurkar.github.io/SQuAD-explorer/) for **Q&A** downstream task.
## Details of SpanBERT
[SpanBERT: Improving Pre-training by Representing and Predicting Spans](https://arxiv.org/abs/1907.10529)
## Details of the downstream task (Q&A) - Dataset
[SQuAD2.0](https://rajpurkar.github.io/SQuAD-explorer/) combines the 100,000 questions in SQuAD1.1 with over 50,000 unanswerable questions written adversarially by crowdworkers to look similar to answerable ones. To do well on SQuAD2.0, systems must not only answer questions when possible, but also determine when no answer is supported by the paragraph and abstain from answering.
| Dataset | Split | # samples |
| -------- | ----- | --------- |
| SQuAD2.0 | train | 130k |
| SQuAD2.0 | eval | 12.3k |
## Model training
The model was trained on a Tesla P100 GPU and 25GB of RAM.
The script for fine tuning can be found [here](https://github.com/huggingface/transformers/blob/master/examples/run_squad.py)
## Results:
| Metric | # Value |
| ------ | --------- |
| **EM** | **78.80** |
| **F1** | **82.22** |
### Raw metrics:
```json
{
"exact": 78.80064010780762,
"f1": 82.22801347271162,
"total": 11873,
"HasAns_exact": 78.74493927125506,
"HasAns_f1": 85.60951483831069,
"HasAns_total": 5928,
"NoAns_exact": 78.85618166526493,
"NoAns_f1": 78.85618166526493,
"NoAns_total": 5945,
"best_exact": 78.80064010780762,
"best_exact_thresh": 0.0,
"best_f1": 82.2280134727116,
"best_f1_thresh": 0.0
}
```
## Comparison:
| Model | EM | F1 score |
| ----------------------------------------------------------------------------------------- | --------- | --------- |
| [SpanBert official repo](https://github.com/facebookresearch/SpanBERT#pre-trained-models) | - | 83.6\* |
| [spanbert-finetuned-squadv2](https://huggingface.co/mrm8488/spanbert-finetuned-squadv2) | **78.80** | **82.22** |
## Model in action
Fast usage with **pipelines**:
```python
from transformers import pipeline
qa_pipeline = pipeline(
"question-answering",
model="mrm8488/spanbert-finetuned-squadv2",
tokenizer="mrm8488/spanbert-finetuned-squadv2"
)
qa_pipeline({
'context': "Manuel Romero has been working hardly in the repository hugginface/transformers lately",
'question': "Who has been working hard for hugginface/transformers lately?"
})
# Output: {'answer': 'Manuel Romero','end': 13,'score': 6.836378586818937e-09, 'start': 0}
```
> Created by [Manuel Romero/@mrm8488](https://twitter.com/mrm8488)
> Made with <span style="color: #e25555;">&hearts;</span> in Spain
@@ -93,8 +93,8 @@ from transformers import pipeline
qa_pipeline = pipeline(
"question-answering",
model="mrm8488/bert-multi-uncased-finetuned-xquadv1",
tokenizer="bert-multi-uncased-finetuned-xquadv1"
model="mrm8488/xlm-multi-finetuned-xquadv1",
tokenizer="mrm8488/xlm-multi-finetuned-xquadv1"
)
# English
@@ -114,7 +114,7 @@ qa_pipeline({
#Output: {'answer': 'работал в репозитории hugginface /','end': 76, 'score': 0.00012340750456964894, 'start': 42}
```
Try it on a Colab:
Try it on a Colab (*Do not forget to change the model and tokenizer path in the Colab if necessary*):
<a href="https://colab.research.google.com/github/mrm8488/shared_colab_notebooks/blob/master/Try_mrm8488_xquad_finetuned_uncased_model.ipynb" target="_parent"><img src="https://camo.githubusercontent.com/52feade06f2fecbf006889a904d221e6a730c194/68747470733a2f2f636f6c61622e72657365617263682e676f6f676c652e636f6d2f6173736574732f636f6c61622d62616467652e737667" alt="Open In Colab" data-canonical-src="https://colab.research.google.com/assets/colab-badge.svg"></a>
@@ -1,20 +1,24 @@
This model is ALBERT base v2 trained on SQuAD v2 as:
This model is [ALBERT base v2](https://huggingface.co/albert-base-v2) trained on SQuAD v2 as:
```
python run_squad.py
--model_type albert
--model_name_or_path albert-base-v2
--do_train --do_eval
--do_lower_case
--version_2_with_negative
--train_file $SQUAD_DIR/train-v2.0.json
--predict_file $SQUAD_DIR/dev-v2.0.json
--per_gpu_train_batch_size 8
--num_train_epochs 3
--learning_rate 3e-5
--max_seq_length 384
--doc_stride 128
--output_dir ./tmp/albert_base_fine/
export SQUAD_DIR=../../squad2
python3 run_squad.py
--model_type albert
--model_name_or_path albert-base-v2
--do_train
--do_eval
--overwrite_cache
--do_lower_case
--version_2_with_negative
--save_steps 100000
--train_file $SQUAD_DIR/train-v2.0.json
--predict_file $SQUAD_DIR/dev-v2.0.json
--per_gpu_train_batch_size 8
--num_train_epochs 3
--learning_rate 3e-5
--max_seq_length 384
--doc_stride 128
--output_dir ./tmp/albert_fine/
```
Performance on a dev subset is close to the original paper:
@@ -0,0 +1,45 @@
This model is [BERT base uncased](https://huggingface.co/bert-base-uncased) trained on SQuAD v2 as:
```
export SQUAD_DIR=../../squad2
python3 run_squad.py
--model_type bert
--model_name_or_path bert-base-uncased
--do_train
--do_eval
--overwrite_cache
--do_lower_case
--version_2_with_negative
--save_steps 100000
--train_file $SQUAD_DIR/train-v2.0.json
--predict_file $SQUAD_DIR/dev-v2.0.json
--per_gpu_train_batch_size 8
--num_train_epochs 3
--learning_rate 3e-5
--max_seq_length 384
--doc_stride 128
--output_dir ./tmp/bert_fine_tuned/
```
Performance on a dev subset is close to the original paper:
```
Results:
{
'exact': 72.35932872655479,
'f1': 75.75355132564763,
'total': 6078,
'HasAns_exact': 74.29553264604812,
'HasAns_f1': 81.38490892002987,
'HasAns_total': 2910,
'NoAns_exact': 70.58080808080808,
'NoAns_f1': 70.58080808080808,
'NoAns_total': 3168,
'best_exact': 72.35932872655479,
'best_exact_thresh': 0.0,
'best_f1': 75.75355132564766,
'best_f1_thresh': 0.0
}
```
We are hopeful this might save you time, energy, and compute. Cheers!
@@ -0,0 +1,45 @@
This model is [Distilbert base uncased](https://huggingface.co/distilbert-base-uncased) trained on SQuAD v2 as:
```
export SQUAD_DIR=../../squad2
python3 run_squad.py
--model_type distilbert
--model_name_or_path distilbert-base-uncased
--do_train
--do_eval
--overwrite_cache
--do_lower_case
--version_2_with_negative
--save_steps 100000
--train_file $SQUAD_DIR/train-v2.0.json
--predict_file $SQUAD_DIR/dev-v2.0.json
--per_gpu_train_batch_size 8
--num_train_epochs 3
--learning_rate 3e-5
--max_seq_length 384
--doc_stride 128
--output_dir ./tmp/distilbert_fine_tuned/
```
Performance on a dev subset is close to the original paper:
```
Results:
{
'exact': 64.88976637051661,
'f1': 68.1776176526635,
'total': 6078,
'HasAns_exact': 69.7594501718213,
'HasAns_f1': 76.62665295288285,
'HasAns_total': 2910,
'NoAns_exact': 60.416666666666664,
'NoAns_f1': 60.416666666666664,
'NoAns_total': 3168,
'best_exact': 64.88976637051661,
'best_exact_thresh': 0.0,
'best_f1': 68.17761765266337,
'best_f1_thresh': 0.0
}
```
We are hopeful this might save you time, energy, and compute. Cheers!
@@ -0,0 +1,44 @@
This model is [Distilroberta base](https://huggingface.co/distilroberta-base) trained on SQuAD v2 as:
```
export SQUAD_DIR=../../squad2
python3 run_squad.py
--model_type robberta
--model_name_or_path distilroberta-base
--do_train
--do_eval
--overwrite_cache
--do_lower_case
--version_2_with_negative
--save_steps 100000
--train_file $SQUAD_DIR/train-v2.0.json
--predict_file $SQUAD_DIR/dev-v2.0.json
--per_gpu_train_batch_size 8
--num_train_epochs 3
--learning_rate 3e-5
--max_seq_length 384
--doc_stride 128
--output_dir ./tmp/distilroberta_fine_tuned/
```
Performance on a dev subset is close to the original paper:
```
Results:
{
'exact': 70.9279368213228,
'f1': 74.60439802429168,
'total': 6078,
'HasAns_exact': 67.62886597938144,
'HasAns_f1': 75.30774267754136,
'HasAns_total': 2910,
'NoAns_exact': 73.95833333333333,
'NoAns_f1': 73.95833333333333, 'NoAns_total': 3168,
'best_exact': 70.94438960184272,
'best_exact_thresh': 0.0,
'best_f1': 74.62085080481161,
'best_f1_thresh': 0.0
}
```
We are hopeful this might save you time, energy, and compute. Cheers!
+2 -2
View File
@@ -332,8 +332,8 @@
"- input_ids: The generated tokens with their integer representation\n",
"- attention_mask: If your input has been padded by the tokenizer, then this would be a vector of 1 for any non padded token and 0 for padded ones.\n",
"- special_token_mask: If your input contains special tokens such as [CLS], [SEP], [MASK], [PAD], then this would be a vector with 1 in places where a special token has been added.\n",
"- type_ids: If your was made of multiple \"parts\" such as (question, context), then this would be a vector with for each token the segment it belongs to.\n",
"- overflowing: If your has been truncated into multiple subparts because of a length limit (for BERT for example the sequence length is limited to 512), this will contain all the remaining overflowing parts."
"- type_ids: If your input was made of multiple \"parts\" such as (question, context), then this would be a vector with for each token the segment it belongs to.\n",
"- overflowing: If your input has been truncated into multiple subparts because of a length limit (for BERT for example the sequence length is limited to 512), this will contain all the remaining overflowing parts."
]
}
],
+1 -1
View File
@@ -294,7 +294,7 @@
],
"source": [
"nlp_fill = pipeline('fill-mask')\n",
"nlp_fill('Hugging Face is a French company based in <mask>')"
"nlp_fill('Hugging Face is a French company based in ' + nlp_fill.tokenizer.mask_token)"
]
},
{
+1
View File
@@ -15,3 +15,4 @@ Pull Request and we'll review it so it can be included here.
| [Getting Started Transformers](02-transformers.ipynb) | How to easily start using transformers | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/huggingface/transformers/blob/master/notebooks/02-transformers.ipynb) |
| [How to use Pipelines](03-pipelines.ipynb) | Simple and efficient way to use State-of-the-Art models on downstream tasks through transformers | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/huggingface/transformers/blob/master/notebooks/03-pipelines.ipynb) |
| [How to train a language model](https://github.com/huggingface/blog/blob/master/notebooks/01_how_to_train.ipynb)| Highlight all the steps to effectively train Transformer model on custom data | [![Open in Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/huggingface/blog/blob/master/notebooks/01_how_to_train.ipynb)|
| [How to generate text](https://github.com/huggingface/blog/blob/master/notebooks/02_how_to_generate.ipynb)| How to use different decoding methods for language generation with transformers | [![Open in Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/huggingface/blog/blob/master/notebooks/02_how_to_generate.ipynb)|
+10 -5
View File
@@ -64,7 +64,7 @@ if stale_egg_info.exists():
extras = {}
extras["mecab"] = ["mecab-python3"]
extras["sklearn"] = ["scikit-learn==0.22.1"]
extras["sklearn"] = ["scikit-learn"]
extras["tf"] = ["tensorflow"]
extras["tf-cpu"] = ["tensorflow-cpu"]
extras["torch"] = ["torch"]
@@ -73,13 +73,17 @@ extras["serving"] = ["pydantic", "uvicorn", "fastapi", "starlette"]
extras["all"] = extras["serving"] + ["tensorflow", "torch"]
extras["testing"] = ["pytest", "pytest-xdist"]
extras["quality"] = ["black", "isort", "flake8"]
extras["docs"] = ["recommonmark", "sphinx", "sphinx-markdown-tables", "sphinx-rtd-theme"]
extras["quality"] = [
"black",
"isort",
"flake8",
]
extras["dev"] = extras["testing"] + extras["quality"] + ["mecab-python3", "scikit-learn", "tensorflow", "torch"]
setup(
name="transformers",
version="2.5.1",
version="2.6.0",
author="Thomas Wolf, Lysandre Debut, Victor Sanh, Julien Chaumond, Sam Shleifer, Google AI Language Team Authors, Open AI team Authors, Facebook AI Authors, Carnegie Mellon University Authors",
author_email="thomas@huggingface.co",
description="State-of-the-art Natural Language Processing for TensorFlow 2.0 and PyTorch",
@@ -93,6 +97,8 @@ setup(
install_requires=[
"numpy",
"tokenizers == 0.5.2",
# dataclasses for Python versions that don't have it
"dataclasses;python_version<'3.7'",
# accessing files from S3 directly
"boto3",
# filesystem locks e.g. to prevent parallel downloads
@@ -110,7 +116,7 @@ setup(
],
extras_require=extras,
scripts=["transformers-cli"],
python_requires=">=3.5.0",
python_requires=">=3.6.0",
classifiers=[
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Developers",
@@ -119,7 +125,6 @@ setup(
"License :: OSI Approved :: Apache Software License",
"Operating System :: OS Independent",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.5",
"Programming Language :: Python :: 3.6",
"Programming Language :: Python :: 3.7",
"Topic :: Scientific/Engineering :: Artificial Intelligence",
+40 -13
View File
@@ -2,7 +2,7 @@
# There's no way to ignore "F401 '...' imported but unused" warnings in this
# module, but to preserve other warnings. So, don't check this module at all.
__version__ = "2.5.1"
__version__ = "2.6.0"
# Work around to update TensorFlow's absl.logging threshold which alters the
# default Python logging output behavior when present.
@@ -19,8 +19,18 @@ else:
import logging
# Benchmarking
from .benchmark_utils import (
Frame,
MemoryState,
MemorySummary,
MemoryTrace,
bytes_to_human_readable,
start_memory_tracing,
stop_memory_tracing,
)
from .configuration_albert import ALBERT_PRETRAINED_CONFIG_ARCHIVE_MAP, AlbertConfig
from .configuration_auto import ALL_PRETRAINED_CONFIG_ARCHIVE_MAP, AutoConfig
from .configuration_auto import ALL_PRETRAINED_CONFIG_ARCHIVE_MAP, CONFIG_MAPPING, AutoConfig
from .configuration_bart import BartConfig
from .configuration_bert import BERT_PRETRAINED_CONFIG_ARCHIVE_MAP, BertConfig
from .configuration_camembert import CAMEMBERT_PRETRAINED_CONFIG_ARCHIVE_MAP, CamembertConfig
@@ -101,12 +111,14 @@ from .pipelines import (
Pipeline,
PipelineDataFormat,
QuestionAnsweringPipeline,
SummarizationPipeline,
TextClassificationPipeline,
TokenClassificationPipeline,
TranslationPipeline,
pipeline,
)
from .tokenization_albert import AlbertTokenizer
from .tokenization_auto import AutoTokenizer
from .tokenization_auto import TOKENIZER_MAPPING, AutoTokenizer
from .tokenization_bart import BartTokenizer
from .tokenization_bert import BasicTokenizer, BertTokenizer, BertTokenizerFast, WordpieceTokenizer
from .tokenization_bert_japanese import BertJapaneseTokenizer, CharacterTokenizer, MecabTokenizer
@@ -145,6 +157,12 @@ if is_torch_available():
AutoModelWithLMHead,
AutoModelForTokenClassification,
ALL_PRETRAINED_MODEL_ARCHIVE_MAP,
MODEL_MAPPING,
MODEL_FOR_PRETRAINING_MAPPING,
MODEL_WITH_LM_HEAD_MAPPING,
MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING,
MODEL_FOR_QUESTION_ANSWERING_MAPPING,
MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
)
from .modeling_bert import (
@@ -210,6 +228,7 @@ if is_torch_available():
BartForSequenceClassification,
BartModel,
BartForConditionalGeneration,
BART_PRETRAINED_MODEL_ARCHIVE_MAP,
)
from .modeling_roberta import (
RobertaForMaskedLM,
@@ -220,14 +239,6 @@ if is_torch_available():
RobertaForQuestionAnswering,
ROBERTA_PRETRAINED_MODEL_ARCHIVE_MAP,
)
from .modeling_camembert import (
CamembertForMaskedLM,
CamembertModel,
CamembertForSequenceClassification,
CamembertForTokenClassification,
CamembertForQuestionAnswering,
CAMEMBERT_PRETRAINED_MODEL_ARCHIVE_MAP,
)
from .modeling_distilbert import (
DistilBertPreTrainedModel,
DistilBertForMaskedLM,
@@ -243,13 +254,14 @@ if is_torch_available():
CamembertForSequenceClassification,
CamembertForMultipleChoice,
CamembertForTokenClassification,
CamembertForQuestionAnswering,
CAMEMBERT_PRETRAINED_MODEL_ARCHIVE_MAP,
)
from .modeling_encoder_decoder import PreTrainedEncoderDecoder
from .modeling_t5 import (
T5PreTrainedModel,
T5Model,
T5WithLMHeadModel,
T5ForConditionalGeneration,
load_tf_weights_in_t5,
T5_PRETRAINED_MODEL_ARCHIVE_MAP,
)
@@ -310,6 +322,12 @@ if is_tf_available():
TFAutoModelWithLMHead,
TFAutoModelForTokenClassification,
TF_ALL_PRETRAINED_MODEL_ARCHIVE_MAP,
TF_MODEL_MAPPING,
TF_MODEL_FOR_PRETRAINING_MAPPING,
TF_MODEL_WITH_LM_HEAD_MAPPING,
TF_MODEL_FOR_SEQUENCE_CLASSIFICATION_MAPPING,
TF_MODEL_FOR_QUESTION_ANSWERING_MAPPING,
TF_MODEL_FOR_TOKEN_CLASSIFICATION_MAPPING,
)
from .modeling_tf_bert import (
@@ -351,6 +369,7 @@ if is_tf_available():
TFTransfoXLModel,
TFTransfoXLLMHeadModel,
TF_TRANSFO_XL_PRETRAINED_MODEL_ARCHIVE_MAP,
TFAdaptiveEmbedding,
)
from .modeling_tf_xlnet import (
@@ -400,6 +419,13 @@ if is_tf_available():
TF_CAMEMBERT_PRETRAINED_MODEL_ARCHIVE_MAP,
)
from .modeling_tf_flaubert import (
TFFlaubertModel,
TFFlaubertWithLMHeadModel,
TFFlaubertForSequenceClassification,
TF_FLAUBERT_PRETRAINED_MODEL_ARCHIVE_MAP,
)
from .modeling_tf_distilbert import (
TFDistilBertPreTrainedModel,
TFDistilBertMainLayer,
@@ -420,6 +446,7 @@ if is_tf_available():
from .modeling_tf_albert import (
TFAlbertPreTrainedModel,
TFAlbertMainLayer,
TFAlbertModel,
TFAlbertForMaskedLM,
TFAlbertForSequenceClassification,
@@ -429,7 +456,7 @@ if is_tf_available():
from .modeling_tf_t5 import (
TFT5PreTrainedModel,
TFT5Model,
TFT5WithLMHeadModel,
TFT5ForConditionalGeneration,
TF_T5_PRETRAINED_MODEL_ARCHIVE_MAP,
)
+1 -5
View File
@@ -44,8 +44,4 @@ def get_activation(activation_string):
if activation_string in ACT2FN:
return ACT2FN[activation_string]
else:
raise KeyError(
"function {} not found in ACT2FN mapping {} or torch.nn.functional".format(
activation_string, list(ACT2FN.keys())
)
)
raise KeyError("function {} not found in ACT2FN mapping {}".format(activation_string, list(ACT2FN.keys())))
+348
View File
@@ -0,0 +1,348 @@
"""
Utilities for working with the local dataset cache.
This file is adapted from the AllenNLP library at https://github.com/allenai/allennlp
Copyright by the AllenNLP authors.
"""
import linecache
import logging
import os
import sys
from collections import defaultdict
from dataclasses import dataclass
from typing import Iterable, List, Optional, Union
from .file_utils import is_tf_available, is_torch_available
if is_torch_available():
from torch.cuda import empty_cache as torch_empty_cache
if is_tf_available():
from tensorflow.python.eager import context as tf_context
logger = logging.getLogger(__name__) # pylint: disable=invalid-name
_is_memory_tracing_enabled = False
def is_memory_tracing_enabled():
global _is_memory_tracing_enabled
return _is_memory_tracing_enabled
@dataclass(frozen=True)
class Frame:
""" `Frame` is used to gather the current frame state:
- 'filename' (string): Name of the file currently executed
- 'module' (string): Name of the module currently executed
- 'line_number' (int): Number of the line currently executed
- 'event' (string): Event that triggered the tracing (default will be "line")
- 'line_text' (string): Text of the line in the python script
"""
filename: str
module: str
line_number: int
event: str
line_text: str
@dataclass
class MemoryState:
""" `MemoryState` lists frame + CPU/GPU memory:
- `cpu`: CPU memory at or before the current frame as a `Memory` named tuple
- `gpu`: GPU memory at or before during the current frame as a `Memory` named tuple
- `frame` (`Frame`): the current frame
Also provide a few properties:
`cpu_gpu`: sum of the CPU + GPU memory at or before during the current frame as a `Memory` named tuple
`cpu_with_units`: CPU memory as a human readable string
`gpu_with_units`: GPU memory as a human readable string
`cpu_gpu_with_units`: CPU+GPU memory as a human readable string
"""
cpu: int
gpu: int
frame: Optional[Frame] = None
@property
def cpu_gpu(self) -> int:
return self.cpu + self.gpu
@property
def cpu_with_units(self) -> str:
return bytes_to_human_readable(self.cpu)
@property
def gpu_with_units(self) -> str:
return bytes_to_human_readable(self.gpu)
@property
def cpu_gpu_with_units(self) -> str:
return bytes_to_human_readable(self.cpu + self.gpu)
@dataclass
class MemorySummary:
""" `MemorySummary` namedtuple otherwise with the fields:
- `absolute_mem_list`: total CPU/GPU memory used at each line
a list of `MemoryState` namedtuple (see below)
- `relative_mem_list`: relative difference in CPU/GPU memory at each line
a list of `MemoryState` namedtuple (see below) computed from the provided `memory_trace`
by substracting the memory after executing each line from the memory before executing said line.
- `absolute_mem_sorted`: total CPU/GPU memory used at each line sorted by lines (max among all the times a line is executed)
a list of `MemoryState` namedtuple (see below)
The list is sorted from the frame with the largest memory consumption to the frame with the smallest (can be negative if memory is released)
- `relative_mem_sorted`: relative difference in CPU/GPU memory sorted by lines (cumulative increase among all the times a line is executed)
a list of `MemoryState` namedtuple (see below) with cumulative increase in memory for each line
obtained by summing repeted memory increase for a line if it's executed several times.
The list is sorted from the frame with the largest memory consumption to the frame with the smallest (can be negative if memory is released)
- `total`: total memory increase during the full tracing as a `Memory` named tuple (see below).
Line with memory release (negative consumption) are ignored if `ignore_released_memory` is `True` (default).
"""
absolute_mem_list: List[MemoryState]
relative_mem_list: List[MemoryState]
absolute_mem_sorted: List[MemoryState]
relative_mem_sorted: List[MemoryState]
relative_mem_total: MemoryState
MemoryTrace = List[MemoryState]
def start_memory_tracing(
modules_to_trace: Optional[Union[str, Iterable[str]]] = None,
modules_not_to_trace: Optional[Union[str, Iterable[str]]] = None,
events_to_trace: str = "line",
gpus_to_trace: Optional[List[int]] = None,
) -> MemoryTrace:
""" Setup line-by-line tracing to record rss mem (RAM) at each line of a module or sub-module.
See `../../examples/benchmarks.py for a usage example.
Current memory consumption is returned using psutil and in particular is the RSS memory
"Resident Set Size” (the non-swapped physical memory the process is using).
See https://psutil.readthedocs.io/en/latest/#psutil.Process.memory_info
Args:
- `modules_to_trace`: (None, string, list/tuple of string)
if None, all events are recorded
if string or list of strings: only events from the listed module/sub-module will be recorded (e.g. 'fairseq' or 'transformers.modeling_gpt2')
- `modules_not_to_trace`: (None, string, list/tuple of string)
if None, no module is avoided
if string or list of strings: events from the listed module/sub-module will not be recorded (e.g. 'torch')
- `events_to_trace`: string or list of string of events to be recorded (see official python doc for `sys.settrace` for the list of events)
default to line
- `gpus_to_trace`: (optional list, default None) list of GPUs to trace. Default to tracing all GPUs
Return:
- `memory_trace` is a list of `MemoryState` for each event (default each line of the traced script).
- `MemoryState` are simple classes with the following attributes:
- 'frame': a `Frame` namedtuple (see below) storing information on the current tracing frame (current file, location in current file)
- 'cpu': CPU RSS memory state *before* executing the line
- 'gpu': GPU used memory *before* executing the line (sum for all GPUs or for only `gpus_to_trace` if provided)
- `cpu_gpu`: CPU + GPU memory *before* executing the line
`Frame` is a namedtuple used by `MemoryState` to list the current frame state.
`Frame` has the following fields:
- 'filename' (string): Name of the file currently executed
- 'module' (string): Name of the module currently executed
- 'line_number' (int): Number of the line currently executed
- 'event' (string): Event that triggered the tracing (default will be "line")
- 'line_text' (string): Text of the line in the python script
"""
try:
import psutil
except (ImportError):
logger.warning(
"Psutil not installed, we won't log CPU memory usage. "
"Install psutil (pip install psutil) to use CPU memory tracing."
)
process = None
else:
process = psutil.Process(os.getpid())
try:
from py3nvml import py3nvml
py3nvml.nvmlInit()
devices = list(range(py3nvml.nvmlDeviceGetCount())) if gpus_to_trace is None else gpus_to_trace
py3nvml.nvmlShutdown()
except ImportError:
logger.warning(
"py3nvml not installed, we won't log GPU memory usage. "
"Install py3nvml (pip install py3nvml) to use GPU memory tracing."
)
log_gpu = False
except (OSError, py3nvml.NVMLError):
logger.warning("Error while initializing comunication with GPU. " "We won't perform GPU memory tracing.")
log_gpu = False
else:
log_gpu = is_torch_available() or is_tf_available()
memory_trace = []
def traceit(frame, event, args):
""" Tracing method executed before running each line in a module or sub-module
Record memory allocated in a list with debugging information
"""
global _is_memory_tracing_enabled
if not _is_memory_tracing_enabled:
return traceit
# Filter events
if events_to_trace is not None:
if isinstance(events_to_trace, str) and event != events_to_trace:
return traceit
elif isinstance(events_to_trace, (list, tuple)) and event not in events_to_trace:
return traceit
# Filter modules
name = frame.f_globals["__name__"]
if not isinstance(name, str):
return traceit
else:
# Filter whitelist of modules to trace
if modules_to_trace is not None:
if isinstance(modules_to_trace, str) and modules_to_trace not in name:
return traceit
elif isinstance(modules_to_trace, (list, tuple)) and all(m not in name for m in modules_to_trace):
return traceit
# Filter blacklist of modules not to trace
if modules_not_to_trace is not None:
if isinstance(modules_not_to_trace, str) and modules_not_to_trace in name:
return traceit
elif isinstance(modules_not_to_trace, (list, tuple)) and any(m in name for m in modules_not_to_trace):
return traceit
# Record current tracing state (file, location in file...)
lineno = frame.f_lineno
filename = frame.f_globals["__file__"]
if filename.endswith(".pyc") or filename.endswith(".pyo"):
filename = filename[:-1]
line = linecache.getline(filename, lineno).rstrip()
traced_state = Frame(filename, name, lineno, event, line)
# Record current memory state (rss memory) and compute difference with previous memory state
cpu_mem = 0
if process is not None:
mem = process.memory_info()
cpu_mem = mem.rss
gpu_mem = 0
if log_gpu:
# Clear GPU caches
if is_torch_available():
torch_empty_cache()
if is_tf_available():
tf_context.context()._clear_caches() # See https://github.com/tensorflow/tensorflow/issues/20218#issuecomment-416771802
# Sum used memory for all GPUs
py3nvml.nvmlInit()
for i in devices:
handle = py3nvml.nvmlDeviceGetHandleByIndex(i)
meminfo = py3nvml.nvmlDeviceGetMemoryInfo(handle)
gpu_mem += meminfo.used
py3nvml.nvmlShutdown()
mem_state = MemoryState(cpu_mem, gpu_mem, traced_state)
memory_trace.append(mem_state)
return traceit
sys.settrace(traceit)
global _is_memory_tracing_enabled
_is_memory_tracing_enabled = True
return memory_trace
def stop_memory_tracing(
memory_trace: Optional[MemoryTrace] = None, ignore_released_memory: bool = True
) -> Optional[MemorySummary]:
""" Stop memory tracing cleanly and return a summary of the memory trace if a trace is given.
Args:
- `memory_trace` (optional output of start_memory_tracing, default: None): memory trace to convert in summary
- `ignore_released_memory` (boolean, default: None): if True we only sum memory increase to compute total memory
Return:
- None if `memory_trace` is None
- `MemorySummary` namedtuple otherwise with the fields:
- `sequential`: a list of `MemoryState` namedtuple (see below) computed from the provided `memory_trace`
by substracting the memory after executing each line from the memory before executing said line.
- `cumulative`: a list of `MemoryState` namedtuple (see below) with cumulative increase in memory for each line
obtained by summing repeted memory increase for a line if it's executed several times.
The list is sorted from the frame with the largest memory consumption to the frame with the smallest (can be negative if memory is released)
- `total`: total memory increase during the full tracing as a `Memory` named tuple (see below).
Line with memory release (negative consumption) are ignored if `ignore_released_memory` is `True` (default).
`Memory` named tuple have fields
- `byte` (integer): number of bytes,
- `string` (string): same as human readable string (ex: "3.5MB")
`Frame` are namedtuple used to list the current frame state and have the following fields:
- 'filename' (string): Name of the file currently executed
- 'module' (string): Name of the module currently executed
- 'line_number' (int): Number of the line currently executed
- 'event' (string): Event that triggered the tracing (default will be "line")
- 'line_text' (string): Text of the line in the python script
`MemoryState` are namedtuples listing frame + CPU/GPU memory with the following fields:
- `frame` (`Frame`): the current frame (see above)
- `cpu`: CPU memory consumed at during the current frame as a `Memory` named tuple
- `gpu`: GPU memory consumed at during the current frame as a `Memory` named tuple
- `cpu_gpu`: CPU + GPU memory consumed at during the current frame as a `Memory` named tuple
"""
global _is_memory_tracing_enabled
_is_memory_tracing_enabled = False
if memory_trace is not None and len(memory_trace) > 1:
init_mem = memory_trace[0]
absolute_mem_list = []
relative_mem_list = []
absolute_mem_dict = defaultdict(lambda: [])
relative_mem_dict = defaultdict(lambda: [])
for line, next_line in zip(memory_trace[:-1], memory_trace[1:]):
absolute_mem = MemoryState(line.cpu - init_mem.cpu, line.gpu - init_mem.gpu, line.frame)
relative_mem = MemoryState(next_line.cpu - line.cpu, next_line.gpu - line.gpu, line.frame)
absolute_mem_list.append(absolute_mem)
relative_mem_list.append(relative_mem)
absolute_mem_dict[line.frame].append(absolute_mem)
relative_mem_dict[line.frame].append(relative_mem)
relative_mem_sorted = list(MemoryState(sum(v.cpu for v in l), sum(v.gpu for v in l), k) for k, l in relative_mem_dict.items())
absolute_mem_sorted = list(MemoryState(max(v.cpu for v in l), max(v.gpu for v in l), k) for k, l in absolute_mem_dict.items())
relative_mem_sorted = sorted(relative_mem_sorted, key=lambda x: x.cpu_gpu, reverse=True)
absolute_mem_sorted = sorted(absolute_mem_sorted, key=lambda x: x.cpu_gpu, reverse=True)
to_sum = (
filter(lambda m: m.cpu_gpu > 0, relative_mem_list)
if ignore_released_memory
else relative_mem_list
)
relative_mem_total = MemoryState(sum(v.cpu for v in to_sum), sum(v.gpu for v in to_sum))
return MemorySummary(
absolute_mem_list=absolute_mem_list,
relative_mem_list=relative_mem_list,
relative_mem_sorted=relative_mem_sorted,
absolute_mem_sorted=absolute_mem_sorted,
relative_mem_total=relative_mem_total,
)
return None
def bytes_to_human_readable(memory_amount: int) -> str:
""" Utility to convert a number of bytes (int) in a human readable string (with units)
"""
for unit in ["B", "KB", "MB", "GB"]:
if memory_amount > -1024.0 and memory_amount < 1024.0:
return "{:.3f}{}".format(memory_amount, unit)
memory_amount /= 1024.0
return "{:.3f}TB".format(memory_amount)

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